Carya illinoinensis (pecan): 122319170
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Entry
122319170 CDS
T08745
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 10-like isoform X1
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122319170
Enzymes [BR:
cill01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122319170
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
90S particles
Helicases
122319170
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
ResIII
CMS1
ATG8
Motif
Other DBs
NCBI-GeneID:
122319170
NCBI-ProteinID:
XP_042993047
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All DBs
Position
8:10613544..10624558
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AA seq
435 aa
AA seq
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MAEDISVIKTFTDLGVCDKLVEACENLGWKTPSKIQAEAIPHALHGKDLIGLAQTGSGKT
GAFVLPILQALLESQPAFFACVVSPTRELAIQIADQFKALGSGFGIKCAVLVGEEDIMEQ
YINLARLPHIIVGTPGRLVDHLSNTKGFSFHALKYLVLDEADCLLEDKFQKSIDEILDLV
PRERKTYLFSATMTRKVQKLQRVCLRNPVKIEVASKYSTVDTLNQHYYLVPSKYKDCQLV
YVLSEKRGFSTMVFTRTCGATRLIALFLRNLGLRAISISGKMTQPRRLEALNQFKEGKCN
ILICTNVASRGLDFPCVDIVINYDIPESPKDYIHRVGRTARAGRLGVAISLVDSYELESF
SKIENCLGMKFTELPFQLEEALLLMERVAEAKRISRRRIQESGSKEKKQGGDDGDEDTEK
YLGVKNGKLSKRIKK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacatttcagtaattaagacatttacggatttgggagtatgtgacaaattg
gtggaggcttgcgaaaatttgggatggaaaactccatcgaagatacaagccgaagcaatt
cctcacgcgcttcatggaaaagacttgattgggctagcacaaacaggttcgggtaagaca
ggagcttttgttcttcccattttgcaagcccttttagaatctcaaccagcattttttgct
tgtgtggtgtcccctacgagggaacttgcaattcagattgccgatcagttcaaagcgtta
ggatcaggctttggtattaagtgtgcagtgcttgttggggaggaagacataatggaacag
tatatcaaccttgcaaggcttccacacattattgtcggaacgccgggacgccttgttgat
catctatccaacacaaaaggtttttcctttcatgcattgaagtatttggttttggatgag
gcggattgcttattggaggacaaatttcagaagtcaatcgatgaaattttagatcttgtc
cctcgtgagcggaaaacatatttattttctgccacaatgacacgaaaggttcagaagctc
caaagggtttgtctaagaaatcctgtgaagattgaagtagcatctaaatattcaacagtc
gacacactaaaccagcattattacttggtgccttctaagtacaaggattgccagcttgta
tatgttttgagtgagaaacgtggattttcaacaatggtttttacgcgtacatgcggcgca
acacgtttgattgctctgtttctacgaaatcttggacttagggccatttcaattagtggc
aaaatgacccagccaaggagacttgaagccttgaatcagtttaaggagggaaagtgcaat
attcttatatgtactaatgtggcaagtagaggacttgactttccatgcgtcgatattgtc
atcaattatgatatccctgaaagccccaaggattatatccatagagtgggaagaactgcc
cgtgcaggacgactgggtgttgcgatctctctagtggatagttatgagctggaatccttt
tcaaagatagagaattgccttggcatgaagtttacagaacttccttttcaactagaggaa
gccttgctattgatggagcgtgttgctgaggccaaaagaatatctcgaaggagaatccaa
gaatctggaagcaaggaaaagaagcagggaggagatgatggtgacgaagatacggagaaa
tacttgggtgtcaagaatgggaagttgtcaaagaggataaaaaaatga
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