Carya illinoinensis (pecan): 122319176
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Entry
122319176 CDS
T08745
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122319176
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
90S particles
Other 90S particles
122319176
Pre-60S particles
Other pre-60S particles
122319176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_RFWD3
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
eIF2A
WDR54
MIOS_WD40
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
122319176
NCBI-ProteinID:
XP_042993058
LinkDB
All DBs
Position
8:28990450..28996815
Genome browser
AA seq
495 aa
AA seq
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MISSIAWLPKGAAKPVPSVADPPSKEEIEEMIKSGAFDRSGDGDGEEDDEDMDTDATVQA
DKAAHALEVADALGRTSNNMKSERSFDDVTNGLKELDMEHYDEEDDGIELFSTGLGDLYY
PNNDMDPYLKDKDDDDSEEVDDIAINPTDAVIVCARSNQDDVSQLEVWIYEESGDGDPNM
YVHHDIIISADPLCTAWLDCPLKGGEKGNFIAVGSMEPSIEIWDLDIIDEVQPCVVLGGI
AEKKEKGKKTSIKYKKESHKGPVLGLAWNKEYRNILASASGDKRVKIWDVAAGKCNITME
HHTDKVQAVAWNHHAPQVILSGSFDHSVVMKDGRIPAHSGYKWSVTADVESLAWDPHTEH
SFVVSLEDGTVKGFDIRAAKSDAASESKPSFTLHAHDKAVCTVSYNPSAPNLLATGSEDK
MVKLWDLSNNQPSCIATMNPKAGAVFSIFFSEDSPFLLAMGGSKGKLEVWDTLSDAGVTR
RFGNHCKRKIPQSSS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgatatcctccatagcttggttacccaaaggggcggcgaagcctgtgccctcggtggcc
gaccctccttccaaagaagaaatcgaagagatgatcaagtccggcgcttttgatcgaagt
ggagatggtgatggtgaggaagacgatgaagacatggatactgatgctactgtgcaggct
gacaaagctgctcatgcattagaggtagctgatgcacttggcagaacttccaataacatg
aagtcagagagaagctttgatgatgttaccaatggtttgaaggaactggacatggaacat
tatgatgaagaggatgatggcatcgagttatttagcacggggctgggggacctttattac
ccaaataatgacatggacccatatctaaaagataaggatgacgatgattctgaagaggtt
gatgacattgctattaatccgacagacgctgtgatagtatgtgcacgtagtaaccaggat
gatgtcagtcaacttgaggtttggatatacgaggaatctggtgacggtgatccaaacatg
tacgttcatcatgatatcatcatttcagcagatccactttgtactgcatggcttgattgt
ccacttaaagggggcgaaaaagggaatttcatagctgttggctcaatggaaccttctatc
gaaatatgggaccttgacattattgatgaagtgcaaccatgtgtagtattaggtggaatt
gctgagaagaaggagaaaggaaaaaagacatcaatcaagtacaaaaaagagagtcacaaa
ggtccggttcttggtcttgcttggaacaaggagtacaggaatattcttgctagtgcaagt
ggtgacaaacgagttaagatatgggatgtagctgctgggaaatgtaatattaccatggag
catcataccgacaaggttcaagcagttgcatggaatcatcatgcaccacaagttatcctt
agtggatctttcgatcattcagtagtcatgaaagatgggagaataccagcacattccggt
tataaatggtcagtcacagctgatgtagaaagcttggcatgggatccacacaccgagcat
tcatttgtggtgagtcttgaagatggtactgtcaaaggttttgatatcagggctgccaag
tctgatgcagcttcggagtcaaaaccaagctttactctacatgcacatgataaagctgtt
tgcacagtctcttacaatccttccgcacctaatcttcttgcaactggatcggaggataaa
atggtaaagctttgggatttgtcaaacaatcaaccatcatgtatcgcgaccatgaatcct
aaagcaggagctgtcttttccattttcttctcagaggacagcccctttttgctggcaatg
ggaggctctaaggggaaattggaagtatgggacacattatcagatgctggggttactcga
agatttgggaaccactgcaagcggaagatacctcaatccagttcttga
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