Carya illinoinensis (pecan): 122319344
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Entry
122319344 CDS
T08745
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122319344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122319344
04147 Exosome [BR:
cill04147
]
122319344
04090 CD molecules [BR:
cill04090
]
122319344
Enzymes [BR:
cill01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122319344
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122319344
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122319344
CD molecules [BR:
cill04090
]
Proteins
122319344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
Zeta_toxin
AAA_21
RsgA_GTPase
ABC_ATPase
AAA_15
AAA_16
AAA_30
DUF815
AAA_7
AAA_25
AAA_24
nSTAND1
AAA_23
nSTAND3
DLIC
Motif
Other DBs
NCBI-GeneID:
122319344
NCBI-ProteinID:
XP_042993300
LinkDB
All DBs
Position
8:complement(10121974..10130154)
Genome browser
AA seq
1296 aa
AA seq
DB search
MEMENGLNVGTTTTHEGAELKNNVEKAENNSPNAIGGRQDFEKSTGEDQNSKTVSFLKLF
SFADSTDVFLMIAGTMGAIGNGLGLPLASVLFGEMVNSLGRPTGIVPLASKVCLKIVYLG
VGVGAGGFIQVACWMITGERQAARIRGLYLKAILRQDVAFFDKETNTGEVVGRMSGDTVL
IQDAIGEKVGKFLQLISTFIGGFAVAFSKGWLLTLVLLASFPLLVASGGLLSIVIAKTAS
RGQAAYANAANVVEQTISSIRTVASFTGEKQAVMNYKRFLITDYKAGVHEGLVSGLGFAA
VKLVAFGSFALAVWFGSKLILNKGYNGGDVLIVITAVLTGSAALGETSPCINAFVAGKAA
AYKMFKTIERKPKIDTYSTKGKILDDIHGDIELRDVFFSYPARPNEQIFSGFSLYINRGT
TSALVGQSGSGKSTVISLIERFYDPQSGEVLIDGINLKDFHLKWIRQKIGLVSQEPVLFA
SSIKDNIAYGKDGTTFEEIRVATELANAAKFIDKLPQGLDTEVGGHGMQLSGGQKQRIAI
ARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVI
QQGKIVEKGSHSELINNPNGAYSQLIHLKEVNKESEQASDDQNRSEITAESSRHDSSLRY
SQRISHLRSISQGSSVNSCSRRSFSAFGLPIEGLIPDDTWTEPEEMFPKVSIRSLALLNK
PEIPILLLGAMAAILNGTLFPLFGMLISKVIKSFYEPPHKLRKDTNFWSIIFVILGVVSF
LAIPARAYLFSVAGCKLIQRVRLMCFEKLVHMEVGWFDKPEHSCGSIGARLSADAARVRA
LVGDSLGQILDVIASAVAGLVIAFVGSWQLAIIILALIPLISINAYAQLKFTKGFSADAK
MMYVEASQVANDAVGSIRTVASFCAEEKVMNLYRSKCEGPRKAGIKLGLITGIGFGTSFG
FLFLAYATSFYAGAQLVQARKATSSDVFQVFFALTFAAMGVSQTSSMGPDTGKAKNAVSS
IFAIIHQQSKIDASDESGITLDNFKGGIEFRHVCFKYPCRPNVQIFHDLSLTIHPNKTVA
LVGESGSGKSTVISLLQRFYDPDSGHIKLDGIEIQKFQVKWLRQQMGLVSQEPVLFNDTI
RANISYGKEEGNATETEIIDIAKLANAHSFISGLQKGYDTIVGERGVQLSGGQKQRVAIA
RAMIKSPKILLLDEATSALDVESERVVQNTLDKVWVNRTTVVVAHRLSTIKNADLIAVFK
NGAIVEKGRHETLIKNKDGFYASLVSIHTTTNASTS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaaaatggcttgaacgtcgggacaacaaccacgcatgagggagccgaacta
aaaaacaacgtagaaaaggctgagaataatagccctaacgcgatcggtggtcgacaagac
ttcgagaagagtactggagaagatcagaattccaaaactgtttcatttcttaagcttttc
tcttttgcagattccactgatgttttcctaatgattgctggtacaatgggtgccattgga
aatggcttaggtctgccccttgcatcagtactcttcggggaaatggttaatagtttggga
agacctacaggcattgttcctttagcttccaaggtctgtctaaaaatagtctacctgggt
gtgggggttggtgccggaggattcatccaggtggcttgctggatgatcacaggggagaga
caagctgcgagaatacggggtttgtacttgaaggctattttaagacaagatgtggctttt
ttcgataaagaaactaacactggagaggtagttgggaggatgtcaggtgatactgttctc
atacaagatgccattggcgagaaggttgggaagtttctgcagttgatatcaacattcata
ggaggttttgctgtggcattttccaaaggctggcttcttacccttgtcctgttggcctca
tttcctcttcttgtggcgtctggaggtcttctgtcaatcgtcatagctaagacagcttcc
cgtggacaagctgcttatgcaaatgcagcaaatgtggttgagcaaacaatcagttcaatc
aggacagtggcatcatttactggggagaaacaagctgtaatgaactataaaaggttcctg
ataacagattacaaagcaggtgttcatgaaggcttggtttcagggttaggttttgccgcc
gttaagttagtagcatttggcagctttgctctggcagtatggtttggatcaaaattgata
ctgaataaaggatacaatgggggtgatgtgctgattgtgattacggctgtgttgactgga
tctgcggccctaggcgagacatctccctgcataaatgcctttgttgcaggtaaagctgct
gcatataagatgtttaagactattgagaggaagccaaagatagatacgtatagcacaaag
ggaaagattttggatgatattcacggagatattgagttaagagatgtcttttttagttat
ccagccagacccaacgagcaaatattcagtggattctctctttatatcaatagaggcact
acttcagctttggttggacaaagtggaagtgggaagtcaacagtgataagtctaatagag
agattctatgatccacagtctggagaagttctgatagatggcattaacctcaaagatttc
catcttaaatggattaggcagaaaattggtcttgttagccaagaacctgtgttgtttgca
tccagtattaaggataatattgcatatggaaaggatggtacaacctttgaagagatcaga
gttgccactgaacttgcaaatgctgctaaatttattgataaattgcctcagggactagat
accgaggttggtgggcatggaatgcagctatctgggggtcagaagcagagaattgccatt
gcaagagcaattctaaaagaccctcggattttacttctggatgaagctacaagtgctctt
gatgcagaatctgagagaattgtgcaggaggcattggacaggatcatggttaatcgaact
accgttattgttgcccatcgtttgagtacagtcagaaatgctgatatgattgcagtcatt
caacaaggaaagatagttgaaaaaggatcacactcggaattaatcaacaatcctaatgga
gcatactcgcaactcatccacttgaaagaagtaaacaaggagtcggaacaggcatcagac
gatcaaaacagatcagaaattactgctgaatcttctagacatgactcaagtctgagatac
agtcaaagaatatcacacctaagatctataagtcagggatcatctgttaatagttgcagc
cgccgttcattctcagcctttggattgcccatagaaggcctcatccctgatgatacgtgg
acagaaccagaagaaatgtttccaaaggtctcaatccgcagccttgccctcctcaacaaa
ccagagattcctattcttcttcttggggctatggctgcaatcctaaatggcacattattt
cctttatttggtatgttgatctccaaggtaatcaaatcattttacgaaccacctcataaa
ctgagaaaggacacaaatttttggtcaataatttttgtgatccttggtgtggtatcgttt
cttgcaattccagcaagagcataccttttttctgtggccgggtgcaagttaattcaacgt
gttagattgatgtgttttgagaagttggttcacatggaggttggttggtttgataagcct
gagcactcatgtggctcgattggtgctaggctttcagcagatgctgctcgagtgagagct
cttgttggagattcacttggtcagattcttgatgttattgcttcagcagttgcaggttta
gtcattgcatttgttggaagttggcagttggcaattattatccttgcattgattcctctg
attagtatcaatgcatatgctcaattaaagttcacgaaaggattcagtgcagatgcaaag
atgatgtacgtggaagcaagccaagttgccaatgatgcagtcgggagtataagaacagtt
gcttctttctgtgctgaagagaaggtgatgaatctatacagaagcaaatgtgaaggccca
aggaaggccgggataaagctaggcttgatcactggaataggatttgggacatcttttggc
ttcttgtttcttgcctatgctacctctttctatgcaggagctcaactggttcaggcaagg
aaagcaacatcctcagatgttttccaagttttctttgctttgacctttgcagccatggga
gtttctcaaacaagctccatgggtccagatactggcaaagccaagaatgctgtttcttcc
atatttgcaataatacaccagcaatcgaagatagatgcaagtgatgagtctggtataact
ttagacaatttcaagggaggaattgagtttcgtcatgtatgctttaagtatccatgcagg
ccaaatgttcagatcttccatgacctcagcttgactatccatcctaacaagacagttgcc
ttggttggagaaagtgggagtgggaaatccacagtcatctcattgctgcaaaggttttat
gatcctgattctggtcatattaaacttgatggaattgaaattcagaagtttcaagtgaag
tggctgcggcagcaaatgggtctcgtgagtcaagaaccagttttgtttaatgacactatt
cgtgccaacatttcatatggaaaggaagaaggaaatgcaacagagacagaaattatagac
atagcaaagttggcaaatgctcatagcttcattagtggcttacaaaagggttatgatacc
atagtaggagaacgtggagtccagttgtccggcgggcaaaagcaacgagttgccattgca
cgagccatgatcaaaagcccgaagatattactattagatgaggctactagtgcattggat
gtcgagtctgaaagagtggttcaaaatacattagataaagtttgggttaaccggactacg
gtggtggttgctcatcgattatccacaatcaagaatgccgatttaatcgcagtttttaaa
aatggagctattgtagagaaagggagacatgagactttgattaaaaacaaggatggcttt
tatgcctccttggtttcaattcacacaactactaatgcttcaacttcctag
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integrated database retrieval system
