Carya illinoinensis (pecan): 122319393
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Entry
122319393 CDS
T08745
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122319393
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122319393
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122319393
NCBI-ProteinID:
XP_042993378
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Position
8:17050259..17053262
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AA seq
466 aa
AA seq
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MHPSIHPLLNSTPHYPSLLSSPYIRITFWLHVLYIYPNTLDPFLSISLFSVFFNFLHSTI
IIASLSFPQQINMANLSSLLYIVFFVLCVITHYSSNAVTVYNVISFGAKANGIGDSTPAF
INAWAAACASTGSTAIKVPKGRYLLGSLAFKGDCKSFDITFQIEGTLVAPADYGVLGKAK
IWLSFEGVSHVTIVGGALDARGQSLWACKLAASNNCPTGATTLSFADSNNIRINGLLSRN
SQMFHIVFSGCQNVHVEKVKIIAAGDSPNTDGIHVQLSSNVAITKSRIRTGDDCISIGPG
TKDLWIERVECGPGHGISIGSLGKDTEELGVQNVTVKKAVFTGTQNGLRIKSWARPSNGF
VQRVRFLGAVMNNVQNPILIDQNYCPHNNNCPTQVSGIKISDVIYRGIRGTSATQTAIKF
DCSSKKPCTGIRLENVNLTCPDQVAQSSCTNAIGRTLGSIQPNGCL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcatccatccatccatccactcttaaattcaaccccacactatcctagcttgctttct
tctccatatataaggattaccttctggcttcatgtattatatatataccccaacaccctt
gatccatttctctccatcagcttattctcagtcttcttcaactttcttcattctaccatc
atcatcgcctctctctctttccctcagcaaatcaatatggccaatctttcgagtctgctt
tacattgttttcttcgttctctgtgttatcacccactactcctcaaatgcagttacggtt
tataatgtaataagctttggagctaaagcaaatggcataggggactccacaccagcattc
attaatgcatgggctgcagcctgcgcctcaacgggttctactgccattaaggtgccaaag
ggaagatatctacttggctctttggccttcaaaggtgactgcaaaagcttcgatatcact
ttccagattgagggaacactcgtggctccggccgattatggtgttctaggaaaagctaaa
atttggctgagctttgaaggcgttagccacgttaccattgtcgggggagcactcgatgcc
agaggacaatctttgtgggcttgcaaattagctgccagcaacaactgtcccaccggagcc
acgacattgagctttgccgattctaacaacattaggatcaatggattgctctcacgaaac
agtcagatgttccacattgtgtttagtggctgccagaacgtgcatgtcgaaaaagtcaaa
atcatagcagccggagacagccccaacacagatggcattcacgtccaattatccagcaat
gttgccatcacgaagtcacgcatcagaacaggggatgattgcatctccattggccctggc
accaaggacttgtggattgaacgcgtcgaatgcggccctggtcacggcattagcataggc
agtcttggaaaggacaccgaagagctaggggtccaaaacgtgacagtgaagaaggcagtt
tttaccggtactcaaaatgggttgagaataaaatcttgggccagacctagcaatggattc
gtccaacgggtccggtttctaggcgcagtaatgaacaatgtccagaatcccatacttatt
gatcaaaattattgcccccacaacaacaactgccctactcaggtatcaggtataaaaata
agtgatgtgatataccggggaattcgagggacatcagcaactcagactgcaataaaattt
gattgtagttccaaaaagccttgcactgggattagactcgaaaatgtcaatctcacttgt
ccagatcaagtggctcaatcctcttgtaccaatgcaattggaagaacccttggctcaata
caacctaacggttgcttgtga
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