Coccidioides immitis: CIMG_00743
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Entry
CIMG_00743 CDS
T01114
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cim
Coccidioides immitis
Pathway
cim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CIMG_00743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cim03041
]
CIMG_00743
Enzymes [BR:
cim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CIMG_00743
Spliceosome [BR:
cim03041
]
Complex C
Other components
Step II factors
CIMG_00743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
S1
DEAD
AAA_22
AAA_19
AAA_30
T2SSE
nSTAND3
AAA_16
TsaE
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
4565914
NCBI-ProteinID:
XP_001246972
UniProt:
J3KHM8
LinkDB
All DBs
AA seq
1225 aa
AA seq
DB search
MDDLQSLELLSLVSRVTTELQNHLGINDKTLAEFVIDQHLKCGGSFKEFKGSLEGMGAEF
PQSLMESIDRLVLAMHPKYKPKQNATDKHSSERENGNGAKINDIEMKAKVFKGLAMPDKA
PQWEDDDYTKPGEILRNDAGADVLDDTFAMLEGLAAKARGKGDGAKSRKRSRSPSSDDYD
RGTRRREKYRSRSRSRSGERRYRRDEDLAHERSGTKYGGRNDRYRDDYKDRRGRRGRDDD
DYFRRPPTPELDERPILYKVYDGRVTGIKDFGAFVNLQGVRGKVDGLVHVSAMQDGARVN
HPSDLVSRAQPVKVKVVSIQGPRIGLSMKEVDQVTGRDLVPQRRIASGANMERLDGTGAD
DRYGNLSSNVHVIEDDDDGKPLRNKKRLNSPERWEIKQLIASGAVSAADYPDIDEEYHAT
LRGEGDFEEEEDVDIEVKDEEPPFLAGQTKQSLELSPIRVVRAPDGSLNRAAMAGTNLAK
ERRELRQQEAQDKAAEQASHVDLNAQWQDPMIAPDQRKFASELRTAQKTDAIPEWKRVTQ
SKDVSYGKRTNLTIKQQRESLPVFKFRKQLLEAVHKNQLLIVVGDTGSGKTTQVTQYLAE
AGFANDGMIGCTQPRRVAAVSVAKRVAEEVGCRLGQEVGYTIRFEDCSSPDTKIKYMTDG
ILQREILLDPDLKKYSVIMLDEAHERTIATDVLFGLLKKTIKRRPDLKLIVTSATLDAEK
FSEYFNGCPIFTIPGRTFPVEIMYSREPETDYLDAALVTVMQIHLTEPEGDILLFLTGQE
EIDTSCEILYERMKSLGPNVPELIILPVYSALPSEMQSRIFDPAPPGSRKVVIATNIAET
SITIDHIYYVIDPGFVKQNAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYT
EAAFQSEMLPTSIPEIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYAL
SALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSDEVLSIVAMLSVQNVFYRPKEK
QQQADQKKSKFHDPHGDHLTLLNVYNAWKNSRYSNPWCFENFIQARQMRRAQDVRQQLVS
IMERYHHKIVSCGRNTIKVRKALCSGFFRNSARKDPQEGYKTLIEGTPVYMHPSSSLFGK
AAEHVIFHTLVLTTKEYMHCTTAIEPKWLVEAAPTFFKVAPTDRLSKRKKAERIQPLHNR
FAGEDDWRLSAQRRQGRGGGGGTWG
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccttcagtcgctggagcttctgtctctggtttccagagtgacaaccgagctc
caaaaccatttaggaatcaacgacaagaccctcgccgagttcgtaatcgaccagcatcta
aaatgtggcggatcattcaaggagttcaagggctcactcgagggcatgggggcggaattc
ccgcagagcttgatggagagtatcgatcgcttggtgctggccatgcacccgaagtacaag
ccgaagcagaatgcgacggacaaacactcctccgagcgggaaaacggcaacggtgcgaag
ataaatgatattgagatgaaggcaaaggtgtttaaagggttggcgatgccggataaggca
ccccaatgggaagatgatgattatacgaagccaggagaaattttgagaaacgatgccggt
gcagacgtcctagacgatacctttgcgatgcttgaaggtctggccgcgaaagccaggggc
aaaggggatggagctaagagtaggaagcggagcaggagcccaagtagtgatgactatgat
cgaggaacgcggcgccgagaaaagtaccgttccagatctagatcacgcagcggtgaacgg
cgctacaggagagacgaagatttggcccacgaacggtcagggacaaagtatggaggaagg
aatgacagatacagagacgactataaggatcgaagaggccggagaggccgtgatgatgat
gactatttccgcagacctcctacacccgaacttgacgaacggccgatcctttacaaggtg
tacgatggacgagttaccggtataaaggattttggggcctttgtcaatctacagggtgtt
agagggaaggtcgatggacttgttcatgtttctgcaatgcaagatggtgctagggtcaat
catccgtctgatctggtgtcgcgagcacagcccgtcaaagtcaaagtcgtgtctatacaa
gggccccgtatcggcttgtctatgaaagaagtcgatcaagtgacagggagagatcttgtt
cctcagagacgtatcgcctccggtgcaaatatggaaagactcgatggaactggagctgat
gatcgctatggtaatttaagctctaacgtacatgtaatagaggatgatgacgacgggaag
ccgctgaggaataaaaagcgcttaaactcgcctgaaagatgggagattaagcaactcatt
gcttctggtgccgtttcggctgcagattatcccgatattgacgaagaatatcacgccaca
cttaggggagaaggtgattttgaagaagaggaggatgtggacattgaagttaaggatgaa
gaaccgccatttttagctggacaaaccaagcaatcgctggagttatcacctatccgtgtt
gtcagggcacctgatggctcgctgaaccgagctgcaatggctgggacaaaccttgcaaaa
gaaagacgggaacttcgccaacaggaggcacaggataaggctgcagaacaagcctcccac
gttgatttaaatgcacaatggcaagaccccatgattgcgccggaccaaagaaaatttgcc
tccgagttgcggaccgcacagaaaacggatgcaattcccgaatggaaacgagttacccaa
agtaaagacgtttcttacggaaagagaacgaacttgacaatcaaacagcaaagagagagt
cttccagttttcaagttccgcaaacaactgctagaggccgtccacaagaatcagctcttg
attgtggtcggtgatactggctcaggaaaaactactcaagtcacccaatatcttgccgaa
gctgggtttgcaaatgatggtatgatcggatgtacgcagcctcgtcgagtcgctgccgtt
tctgttgcgaaacgtgttgcggaagaggttggttgccgactgggccaggaagttggatac
actattcgctttgaggattgctcgagcccagatactaagatcaaatatatgacagacggc
atccttcagagagagattcttttggatccggacttgaaaaagtactccgttatcatgctt
gacgaagcacacgagagaacaattgctacagatgttctttttgggcttctgaaaaagact
attaaacgaagaccggatttaaagctaatcgttacatccgcaaccctcgatgctgagaag
ttctctgaatatttcaacgggtgccccatttttacaataccaggccggacgtttcctgtt
gagatcatgtattctcgcgaaccggaaacagattatctggatgctgcacttgtcacagtg
atgcaaattcacctcacggagccagaaggcgacattttactctttctaactggtcaggaa
gaaattgacacgagctgcgaaattttgtacgagagaatgaaatctcttggcccaaatgtc
ccggaattaattattcttcccgtctattctgctcttcccagcgagatgcagagtaggatc
ttcgatccagcacctccaggaagcaggaaagtggttattgcgacgaatatcgccgaaaca
tccattactatagaccacatttactatgttattgaccctggttttgtgaagcagaacgct
tatgatccaaaattaggcatggactcacttgtcgtgactccaatctctcaggcacaggcc
aagcaacgagcaggtcgtgctggaagaactggccctggtaaatgttttcgtctatacacg
gaggctgcattccagtccgaaatgttaccaacttccatccccgaaattcaacgccaaaac
ctatctcatactatcctgatgctaaaagctatgggaattaatgatttacttcacttcgac
ttcatggacccgccgccaacaaatactatgcttacagctcttgaagaactatacgccctt
tcggcccttgatgacgaaggccttttgacccgacttggcaggaaaatggcagacttcccc
atggaaccagctctcgcaaaagttctcatcgcatcagtcgatatgggttgctccgacgag
gttctaagtatcgtagctatgctttccgtccagaatgttttctatcgtcccaaagaaaag
cagcaacaggccgaccaaaaaaagtccaaattccacgatccgcatggcgatcaccttact
cttctcaatgtctataacgcctggaaaaattcccggtacagtaacccttggtgctttgaa
aacttcattcaagctcggcaaatgcggcgtgcacaggacgttcgccagcaactagttagt
atcatggagagataccatcataagattgtatcgtgcggaaggaacacgatcaaagttcgc
aaagcgttatgttcgggattcttcaggaattccgcgcgcaaggatccgcaagagggctac
aagactctgatcgaaggaacgccggtatacatgcatcccagctcgtcgttgtttgggaag
gcagcggaacacgttattttccatacactggtgctgacaacgaaagaatacatgcattgt
acaactgcgattgagccgaagtggctcgtcgaagcagcaccgacgttcttcaaagtcgct
ccaactgaccgcctatctaaacggaagaaggcagaacgtatccagccactccataaccgt
tttgctggcgaggatgactggcgattatctgctcaaagacgacagggaagaggtggtggt
ggtggcacttggggttaa
DBGET
integrated database retrieval system
