Coccidioides immitis: CIMG_01600
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Entry
CIMG_01600 CDS
T01114
Name
(RefSeq) transcription initiation factor TFIIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cim
Coccidioides immitis
Pathway
cim03022
Basal transcription factors
cim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CIMG_01600
09124 Replication and repair
03420 Nucleotide excision repair
CIMG_01600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cim03021
]
CIMG_01600
03400 DNA repair and recombination proteins [BR:
cim03400
]
CIMG_01600
Transcription machinery [BR:
cim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CIMG_01600
DNA repair and recombination proteins [BR:
cim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CIMG_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
KfrA_N
Motif
Other DBs
NCBI-GeneID:
4567287
NCBI-ProteinID:
XP_001247829
UniProt:
J3KJJ6
LinkDB
All DBs
AA seq
637 aa
AA seq
DB search
MAPAPASAEASYKKKDGILSLSRDGESVSWTPKASGGPVAGFTLQVANLSHLQQTPVTSA
KVMLKIFVKQPGTPGAGNATPGAPEQYVFTFTSATNARGEADTIKNVLNTGIQAAKSSHA
PVPAGQSAAMAIAKAVISTTSEKPIWYDDNKLKTDDQLQLSLLSSDPNLRRVFAESLRTK
PESVTSGQLREQFWSSRIHLLRAHAIEKAQARGSYNVLASLKPRVENSVTKLNISKEQIQ
LMFNQHPLVKRAYDENVPRLTEEEFWSRFFQSRLFKKLRGERITESDATDSLLDKYLRVD
EHGERHPVANVPHIIDLEANEDNAKRYGNRPNFDMRPSPLEKVPIIRTLNALSEKIMANV
APIDHDPSAPIGMDEETFNQLQLRDLRGDEEQNWTILNIKDQSRFFAATKDAESEEARIF
ANQDPAAILKSLQVDVTKTYPDRGTGVALGQLVEPEEDDSDEDESHPKKEPVGSKASLAR
ASAQIFEAIRERRTQADSASDSRTCGLSQTVFDSLTLTHATTTEFLHQFWQAFLSGNPDR
VSEITSLVESLNRAMDRIKAVANEAEAERQAEVEKLKQHAREVMAATGRNIRPNLKGVEG
GRKVVNQLMAPTMNALGKAIAEYKHALAQQTKDAALV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgctccggcgagtgcggaagcatcatataaaaagaaagatggaatcttgtcc
ctgtctcgtgacggagagtccgtctcgtggacaccaaaggcaagcggcggtccagtggcc
gggtttacgcttcaggttgcgaatctcagccatctccagcaaaccccggtcactagcgcg
aaagtaatgctcaagatttttgtaaagcaaccaggaacgcccggcgctggaaacgctacc
cccggggcgccagaacagtatgtttttaccttcacgtctgcaacgaatgcccgtggcgag
gcggatacaattaaaaatgtcctcaatacgggcattcaagcggcgaaaagttcacacgcc
cctgtaccggcgggacagtcggcggccatggcgatagccaaggcggtaatttctactacg
agcgagaagccgatttggtacgatgacaataaactgaagacggatgaccagttgcagctg
tcactgttgagttcagacccgaatctacgacgggtcttcgcagaatctctacgcacaaag
ccagaatctgtcacgagtggacagctcagggaacagttctggtcttctcggatacatcta
cttcgcgcccatgccattgaaaaggcccaggctcgcggctcatataatgtacttgcttca
ctcaagccacgggtggagaatagcgtgaccaagttaaacattagtaaagaacaaatacaa
ctgatgttcaaccaacacccgttggttaagcgggcctatgatgagaatgttcctaggttg
acagaggaagagttctggtctcgattctttcaaagcaggctctttaaaaagttgagaggc
gagcgaatcacggaatcagatgctacagactcgttactagataaataccttagggtcgac
gagcatggggagcgacatccggtggcaaacgtaccgcatattatcgatctcgaagcgaat
gaagacaacgctaagcgctatggtaatcgccccaatttcgacatgagaccatcgcccctg
gaaaaggttcctatcatccgaacactgaatgctctgagtgagaagatcatggccaatgtc
gcgccaattgaccatgatccatcagctccgattggaatggatgaagagacttttaatcaa
ctgcaactgcgggatcttcgcggagacgaagagcagaattggaccattttgaatatcaag
gatcagagtagattctttgcggcaacgaaggacgcggaaagcgaggaggcccgcatcttt
gccaaccaagatccagccgcgattttaaagtctctgcaagttgacgtaaccaaaacatac
cccgatagaggaactggcgtagcactgggtcaacttgttgagcccgaagaagacgatagt
gacgaggacgaatcacaccctaaaaaggagcctgtcggctcgaaagctagtctagccaga
gcatcagcccagatcttcgaggccattcgagagaggagaacacaagctgattccgcatca
gattccaggacctgtggcttatcgcaaacagtttttgacagcctcacgctaacccatgcc
acgactacagagtttctgcatcaattctggcaagcctttctctctggaaatccagatcgc
gtttccgagatcacctccttggttgaatctcttaatcgggcgatggatcggatcaaagct
gtggctaacgaggctgaggctgagaggcaggccgaggttgagaaactcaagcagcacgcc
agagaagtgatggctgcgactggcagaaatattcgaccgaacctgaaaggggtggaagga
ggtcggaaggtggtaaaccaattgatggcgcccaccatgaatgcattgggaaaggctatt
gcagagtataaacacgctcttgcacagcagaccaaggatgcagctcttgtataa
DBGET
integrated database retrieval system
