Coccidioides immitis: CIMG_01937
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Entry
CIMG_01937 CDS
T01114
Name
(RefSeq) DNA mismatch repair protein msh-2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cim
Coccidioides immitis
Pathway
cim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CIMG_01937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cim03400
]
CIMG_01937
DNA repair and recombination proteins [BR:
cim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CIMG_01937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Clusterin
Motif
Other DBs
NCBI-GeneID:
4567704
NCBI-ProteinID:
XP_001248166
UniProt:
J3KKA0
LinkDB
All DBs
AA seq
941 aa
AA seq
DB search
MSSRPELKVDDEVGFIRFFRSLPSKDDSTTVRVFDRGDWYTAHGTDAEYIARTVYKTTSV
LRTLGRSDTSGLPSVTMTVTVFRNFLREALFRLGKRIEIWSSQGGMGKGVWKLVKQASPG
NLQDVEDELGSGGGMMDTAPIILAVKISARASETRHVGVCFADASVRELGVSEFDDNDLY
SNFESLVIQLGVKECLVTTDGQKKDVELAKIRSIADSCGIAISSRPASDFHTRDIDQDLS
RLLKDERTAGTLPQTDLKLAMGAAAALIKYLGAMSDPSNFGQYQLYQHDLSQYMKLDSAA
LRALNLMPGPRDGVKSMSLYGLLNHCKTPVGGRLLAQWLKQPLMNHEDIEKRQQLVEAFV
SDTELRQTMQEDHLRSIPDLYRLAKKFQRNAATLEDVVRIYQVVIRLPGFINTLEAVMDE
QYQEPLEEEYTSKIRNLSNSFGKLAEMVETTVDLEALDHHEFIIKPEFDESLRIIRKKLD
KLRYDMHAEHRRVGRDLNQDTEKKLFLEDHRVHGWCFRLTRNEAGCIRNKREYQECSTQK
NGVYFTTSTMQSLRREHDQLSQNYNRTQTGLVNEVVNVATSYCPLLEQLAGVLAHLDVIV
SFAHVSVHAPTPYVRPKVHPRGTGNTILKEARHPCMEMQDDISFITNDVSLVRNESSFLI
ITGPNMGGKSTYIRQIGVVALMAQTGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFM
AEMLETANILKTATSESLIIIDELGRGTSTYDGFGLAWAISEHIITEIRCFGLFATHFHE
LTALEERYPNSVKNLHVVAFIGDNVSDKQNNTASKKKREVTLLYRVEPGVCDQSFGIHVA
ELVRFPEKVVNMARQKAEELEDFTTAAEKGENSMDIDKYSAEEVAEGSSLLKAMLVKWKA
QLEAPGNENMTVEEKRQLMRDLVEADGRLKANKVFQGINAL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaggccggagcttaaggtcgacgacgaagtcggtttcattcgattcttccgc
tcgctaccatcaaaggatgactctacaaccgttcgagttttcgaccgcggcgactggtat
acagctcatggcactgatgcggagtacatcgctcgcacggtctacaagaccacttctgtc
ctccggacgcttgggcggagcgatacaagcggattgccctccgtcacgatgacggtgact
gtgttccggaattttcttcgagaagctctcttccgtttaggtaagaggatagagatatgg
tcgtctcaaggtggaatgggtaagggagtttggaaactggtcaagcaagcaagccctggg
aatttgcaggatgtcgaagatgagctgggttctggtggtgggatgatggatacagcaccg
atcatccttgccgttaagatctccgcgagagcgtctgagactaggcatgttggcgtttgc
tttgcagatgcgagtgttcgggagttgggtgtcagcgagtttgatgacaatgatctatat
tcaaattttgagtctttggtcattcagctcggggttaaagagtgtttggtcactacggat
gggcagaaaaaggacgttgagctcgcgaagataagatcaatcgcggatagctgcgggatc
gcgatttcgagcaggccggcttctgatttccacacgagagatattgatcaagatttgtcg
aggctactgaaagatgaacgtactgccggaactttaccacaaactgatctcaagctggct
atgggcgccgcggctgccttgattaaatatcttggtgctatgtcggatccgtctaacttt
ggccagtatcaactttatcaacatgatctctcccagtatatgaagctggactccgctgca
ctgagagcgctgaatttaatgccaggcccgcgtgatggtgtgaaaagtatgagtttgtat
gggcttttgaatcattgcaaaacccctgtgggcgggcggctacttgcccagtggctgaag
cagcctttgatgaaccatgaagatattgaaaaaaggcagcaactcgtcgaagcctttgtc
tcagacactgaactaaggcagacaatgcaggaagaccacctcagatccatccctgatctc
tacaggttggcgaagaagtttcaacgaaacgctgcaacccttgaagatgttgtcaggatt
taccaagttgtcatacggctgccaggatttattaacacccttgaggctgtcatggatgag
cagtatcaagagccgttggaagaagagtatacttcgaaaatccgcaatctttcaaacagc
tttggcaaattggcggaaatggtggagacaacagtcgacttggaagctctagatcatcat
gagtttattattaaacccgagttcgatgagagtctgcggataatcaggaaaaagttagac
aaactgaggtacgatatgcacgctgagcatagacgtgtgggccgtgatttgaatcaagat
accgagaagaaactgttcctcgaggaccatcgggttcatggatggtgttttcgattaacc
cgaaacgaagcgggctgtatacgcaacaagcgggagtaccaggagtgctcaacccagaag
aacggcgtctacttcacaacatctacaatgcaatctcttcggcgagaacatgaccagtta
tctcaaaattataaccggacgcaaaccggtttggttaacgaagttgtcaacgtcgcaaca
tcgtattgccctttgcttgaacagcttgcaggcgtgctggcacatctcgacgtcatcgtc
agcttcgctcatgtttcagtccatgctcctactccgtacgttcgaccaaaagtccatcct
cgtgggaccggcaatactatccttaaagaagcccgtcatccgtgcatggaaatgcaagat
gatatctcttttatcaccaatgatgtttccctcgttcgtaacgaatcctcctttcttata
atcaccggtcctaatatgggcggtaagtccacctatatcaggcagattggtgtggttgcg
ctcatggcccaaactggctgctttgtgccgtgctctgaagcggagctcacgatatttgac
tgtatcctggctcgtgttggagcaagtgattcccagctcaagggcgtctcaacgtttatg
gccgaaatgctcgagaccgcaaatattctgaaaacagcaacatcggaatcgttgataata
attgacgagctcggtcgtgggacaagtacatatgacggatttgggcttgcttgggcaata
tccgagcacataattactgagattcgatgtttcggcctcttcgcaacccacttccatgaa
ttaacggcccttgaggaacgatatcccaactcggtcaagaaccttcacgtcgttgcgttc
atcggggacaatgtaagcgacaagcagaataatacagcgagcaagaagaaacgagaagtt
accctgttataccgggtagagccaggggtctgcgatcagtcgtttgggatccacgtggcc
gaattggttcgcttcccggagaaagtcgtcaatatggcgcgccagaaagctgaagagttg
gaagacttcacgacagcagctgaaaagggtgagaattccatggatatcgacaagtattcc
gccgaggaggtggcagaaggaagttctctgctcaaggccatgcttgtcaaatggaaagcc
cagctggaagctcctggcaatgagaatatgacggtggaagagaagagacaattaatgagg
gatctagttgaggcggatggcagactaaaggccaataaagtctttcaagggatcaatgct
ttgtga
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