Coccidioides immitis: CIMG_02102
Help
Entry
CIMG_02102 CDS
T01114
Name
(RefSeq) ATP-dependent RNA helicase DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cim
Coccidioides immitis
Pathway
cim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIMG_02102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_02102
03036 Chromosome and associated proteins [BR:
cim03036
]
CIMG_02102
Enzymes [BR:
cim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CIMG_02102
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CIMG_02102
mRNA degradation factors
5'-3' decay
Decapping complex
CIMG_02102
Chromosome and associated proteins [BR:
cim03036
]
Eukaryotic type
Gene silencing
piRNA pathway
CIMG_02102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
4566476
NCBI-ProteinID:
XP_001248331
UniProt:
Q1E5R1
LinkDB
All DBs
AA seq
512 aa
AA seq
DB search
MAEALASQLNKAKLGDNGAETKWKEQLKLPPKDTRTQTEDVTATKGLEFEDFYIKRELMM
GIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKISKTQALI
LVPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLQDDIIRLSDTVHIIVGTPGRILDLA
SKGVADLSECTTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFKDK
HMRNPYEINLMDELTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELL
AKKITELGYSCFYSHARMLQQNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFD
FPKNAETYLHRIGRSGRFGHLGLAINLINWDDRYNLYKIEQELGTEIQPIPPSIDKKLYV
YDTPETIPRPIANASTERNPPAQLAQSSDNQNHRQAHHISGGHGQQTANRGHSLRGSYRG
GRAQGHRGGHPENNRTNPMSSRSNMPTSTTAS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcattggcttcgcagctgaacaaggccaagttaggggacaatggcgcagaa
accaagtggaaggaacagcttaaacttcccccaaaagatacaaggacacaaacagaggat
gtcacagccacaaagggtttggagtttgaggatttttatatcaaacgagaattgatgatg
ggaatatttgaggctggctttgagaaaccgtctcctatccaagaagaaaccatacccgtt
gcacttaccggtcgtgatatactcgctcgggcaaaaaacggaactgggaaaacagcggcc
tttgtcataccaactttagaacgcaccaatcccaaaatctcgaagacgcaggccctcatt
ctcgtacctacaagagagttagcgcttcaaacgtcacaagtgtgcaaaaccttaggcaag
catctcggtatcaatgtgatggtaaccactgggggtactggcctacaagacgatattatt
cgattgagtgatactgtccatatcatagttggtacacccggaagaattctcgacctcgca
agcaagggtgtggcagatttgtctgaatgcactacatttgtaatggatgaggccgataag
cttctgtcaccggaatttacacctgttattgaacaactactgtcattccatcccaaggac
cgccaagttatgcttttcagtgctacctttccaatgattgtgaaatctttcaaggacaag
catatgcgaaatccgtacgagatcaatctcatggatgaactcacattacgcggtatcaca
caatattatgcttttgttgaagaaaggcagaaggtccattgtctaaacactctattttcc
aaattgcaaatcaatcagtccattattttttgcaattcaacaaaccgagtggagttgctt
gcaaagaaaatcaccgagcttgggtactcctgcttttattctcatgcgagaatgcttcaa
caaaatcgaaaccgtgttttccatgactttcggaacggtgtttgccgtaatcttgtctgt
tcggacttactcactcgaggaattgatatccaagccgttaacgtcgtcataaactttgat
tttccgaaaaacgctgaaacgtatcttcatcgaattggccgttccggtcgatttggccat
ctaggcttagcaatcaatcttatcaattgggatgatcggtacaacttatacaaaattgaa
caggagcttggaaccgagattcaaccgataccgccatcaattgataaaaaactttacgtc
tatgatacccccgaaacaatcccacgccctatagcaaatgcgtctacagaacgtaaccca
cctgcacaacttgctcagagttctgacaatcaaaaccatcgccaagctcaccatataagt
ggggggcacgggcaacaaacagcaaatcgagggcattcactccggggatcctacaggggt
ggtcgtgctcagggtcaccgcggtggacatccagagaacaatcgtacgaacccaatgtct
tctcgctcgaatatgccaacttctactactgcatcctaa
DBGET
integrated database retrieval system
