Coccidioides immitis: CIMG_02108
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Entry
CIMG_02108 CDS
T01114
Name
(RefSeq) pre-rRNA processing protein Utp22
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cim
Coccidioides immitis
Pathway
cim03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CIMG_02108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cim03009
]
CIMG_02108
Ribosome biogenesis [BR:
cim03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CIMG_02108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap_D3
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
4567951
NCBI-ProteinID:
XP_001248337
UniProt:
J3KKN7
LinkDB
All DBs
AA seq
1098 aa
AA seq
DB search
MPIPSAKRRKLVDGDEKSDGRKPARPQKDAPSPNGLNGIHGPRSQPVASAVKLATTSGQF
KSNLFKLQIDELLHQLRPDDDKQLRFVQQPLRRLKEIIEGIPARCAKSVRDAEVDLRKAG
VAIPFPEPRPSHDAKYLLEYARPTAISVVGSFALKTAVKGLGHPTVDLAVTIPKRLLQKK
DYYNYRYIYKRAYYISCIAAGIKISNEPGFHLSYAYQDDDKLRPIILIELTERANDNNSR
SKLIVRVITAVENDTFPVDHTTATRHKVRHVFPTHDKPGFPEFVSVYNSTVRAESSVAEY
SRVLHAAIIKCPAFRDACILGRTWLRQRGFGTSIVQGGFGHFEWAILLALLLENGSTTEK
ALFSKSYNPYQLFKAMVQFLSGRDLTKPFVFFSDEMKQKLPVGSGPVLFDGKRGVNLLFK
MTFWSYQLLRHEAVITLSMLNDPLLDHFDNIFINRVDYPLCRFDEYLTLRPQSSQKTALD
ILSCCCSAHGVLTKALGDRTRLVHISYSDSPRWPIQSDIGGLDIKPVGVGLLLNQDTCHR
IVDRGPLAEDKEASSDFREFWGDKAELRRFKDGTIAETLVWSERPSDGSVIRQIITYSLC
RHLDLLPDDIHFKGLDSEKFPAIRDVMRPRTDFQPVLDAFRSLECKLRNLHGLPLTFRQM
FGASPILRHSSLDMSTSDRGWSKPIDVILQFEGSARWPDDLAAIQMTKLSFLIKIGELLE
QSEGGVPCRVGLEDSDSGIQNAAFLDISFSHMLTFRLRLYHECEQKLLEKCLRGRNMGDQ
VKENLASALIAHKRLFPYQIQHTQAIQTLATRFPLLTPTIRAFKLWVNSHLFEPYFCEEL
LELLVCRVFLHPEPWTTPSSVGNGLLHTLYLISKWDWQHEPLVVDFNNKLTLSDFADIKT
RFAAWRKIDPLMNTVSLFVASSLDYEGIAWTRRGKPPKVVALRLSNLTRAALDLVKKMGV
EVCFSHLFRSLLQDYDFVLHLNPQSGTTSGGQQLYKNLPEPRSSGKVDVITHLLGELDRM
YGSHILFFHGNEECKVIAGLWKPYSTKPRGFGLKLNYSIAPVTDTDATDQAVVLAKDTTL
KDITTLGGDLISKAEINR
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgccgattccgagcgccaaaaggaggaaactagtcgacggggacgagaaaagcgatgga
cggaagccagcccgtcctcaaaaagatgcaccaagccctaatggcctaaatgggattcat
ggcccccggtcgcaaccggtagcctctgctgtgaaattggctaccacaagtggacaattt
aagtcgaatcttttcaaattgcagatcgacgaattgcttcaccaactacgacctgatgac
gataaacaacttcgttttgttcagcaacccttacggcgacttaaggagataattgaaggc
atcccagctagatgcgccaaatcagtaagggatgcggaagttgatttacgaaaagcggga
gtagctattccgtttcctgaaccgcgacctagccacgacgcgaaatacttgttggagtac
gctaggccgacagcaatcagtgttgtgggaagctttgcgctgaagactgcggtgaaggga
ctgggacaccctacggtcgaccttgcagtcactattccgaaacgtctcttacaaaaaaag
gactattacaactatcgttatatttacaagcgagcttattacatatcctgtatagccgca
ggcatcaagatctccaatgaaccgggtttccatctcagctacgcttaccaagatgacgat
aaattgcggcctattatccttattgaacttaccgaacgggcgaacgataacaatagtcgc
tcaaagttgattgtgcgggtcatcactgcagtcgaaaatgacacgtttcctgtggaccat
actaccgctacccgccataaggtacgacacgtttttcccactcatgacaagcctggcttt
ccggaatttgtttcagtatataattctactgttcgcgcggagtcatcggttgctgagtat
tcaagagtcttgcatgccgcgatcatcaagtgcccagcgttccgggatgcctgcatctta
ggacgaacttggctccgtcagcgtggatttggcacatccattgtccaaggtggttttggc
catttcgagtgggctattctgttagcgttactcttggaaaatggatctaccactgaaaag
gcacttttctcaaaaagttacaatccgtaccagttattcaaagccatggtgcaattccta
agtgggagagacttgacgaagccttttgtgtttttcagtgacgaaatgaaacagaaactc
cctgtgggaagcggtcctgttttatttgatggaaaacgaggagtaaacctgctcttcaaa
atgaccttttggtcatatcaactacttcgtcacgaagcagttatcactctcagcatgcta
aacgatcctctcttagaccacttcgataatatcttcatcaaccgggtggactacccactt
tgcaggttcgatgaatatctaacactgagaccccagtcaagccagaagacggccttggat
atcctttcgtgctgctgctctgcccatggtgtgctcacaaaagccctcggagacaggacg
aggctcgttcatattagttacagtgatagccctcggtggcctattcagtcagacattggg
ggtttagacattaaacctgtcggtgtagggttactccttaaccaggatacttgccatcgt
attgtcgaccgcggtcccctggcggaagataaagaagcctcttcagattttcgggagttc
tggggggacaaagctgaattgcgacgtttcaaggatggtacaatcgctgaaactttggta
tggtcggaacgcccatctgatggatcagttatacgtcaaataatcacatatagtctctgc
cgacatttggatttgttaccggatgatatacatttcaaaggtttggattctgagaagttc
ccggccatccgagacgtcatgagacctcgaacagactttcaaccagtattggatgcgttt
agatcactcgagtgcaagcttcgcaatctgcacggtttacctttgacttttcgtcaaatg
tttggtgcgagccctatcctgcggcattcgtcacttgacatgtcaaccagtgaccgaggt
tggtccaaaccaatcgatgtgattctccagttcgaaggatcagctcgatggcctgatgac
ctcgcggcaattcaaatgacaaagttgtcattcttgataaagattggggaattattagag
cagtccgagggtggcgtaccatgtagagtgggcttagaggacagtgacagcggaatccaa
aacgcggcgtttctcgacatcagcttctcgcatatgttgacttttcgccttcgtctatat
cacgaatgcgaacaaaaattgctggagaagtgcctcagaggccgaaatatgggggatcaa
gtaaaagaaaaccttgcttcagctcttattgctcataagcggctcttcccctaccaaatt
cagcatacgcaggccattcagacgctagctacccgattcccgctcctgacgcctactatt
cgtgcttttaaactgtgggtgaattcgcatcttttcgaaccttacttttgcgaggaatta
ttggaactcctagtctgtcgtgttttcctccatcccgagccatggacaaccccttcgagt
gttggtaacggccttctccataccctgtacctcatttcaaaatgggattggcagcacgag
cctcttgtggtcgactttaacaacaaactaacgctaagtgacttcgctgatatcaaaacc
cgattcgcagcatggcgtaaaattgatccacttatgaataccgtcagcttgtttgtggcc
tctagtttggattatgagggtatcgcttggactcgtcgaggaaagccaccaaaggttgtc
gctttaagactctcgaatcttactagagcggcacttgaccttgtcaagaagatgggagta
gaggtttgcttttctcatcttttccggtctttactgcaggactatgattttgtccttcat
ctcaatccccaaagtggcacgacttctggaggccaacaattgtataaaaatcttccggaa
ccgagatcgtctggtaaagtagatgtgataacgcatcttctcggcgaacttgaccgtatg
tacgggagccatatcttgttcttccacgggaatgaagagtgcaaggtgattgcaggtctc
tggaagccgtattctacaaaacctcggggctttggcctgaagctgaactactcgatcgca
ccagtaaccgatacggatgccacggatcaagcagtagttttagccaaggacacgacctta
aaagatatcactacccttggtggagatctcatttctaaggcggagataaacaggtga
DBGET
integrated database retrieval system
