Coccidioides immitis: CIMG_02207
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Entry
CIMG_02207 CDS
T01114
Name
(RefSeq) mRNA cleavage and polyadenylation specificity factor complex subunit
KO
K06100
symplekin
Organism
cim
Coccidioides immitis
Pathway
cim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CIMG_02207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cim03021
]
CIMG_02207
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_02207
Transcription machinery [BR:
cim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CIMG_02207
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CIMG_02207
U7-dependent histone pre-mRNA processing factors
CIMG_02207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
SMMA_N
Motif
Other DBs
NCBI-GeneID:
4568145
NCBI-ProteinID:
XP_001248436
UniProt:
J3KKW1
LinkDB
All DBs
AA seq
809 aa
AA seq
DB search
MALPVSSLVEQMSQLDAARNLVLGDAALYPQIVHGIIPIIGPNSRLELRRWGAEFLAETF
ASPAFPQPAKQKLATEVLATIQDLLSISMEDTAVLKGAIQASASVYSLVFRYIIDHPEDS
TLWERMTAIKHAILRKWDATSPGVKICCIKFAQRVVQAQTQGVISDPRRPEKNEISLALV
PKNHPLIPIPNLEAEASGLLDRLLNVFHENSSDPLLVNATLNSLAVLIRMRPSISNKIIN
AILSFNPLKQANAPMTPTARVNIKSMERTTRALLVNLLKRNPSNPLAGRIQQYIERMAQS
RNEIFEEATRKRALPTEPTDLVDSAKRARLGVNTPPQLKIPPLPPGPTSFAQLFTLTEDA
GLTSFDVKQLPLDLLVKITVPILNRIDAEALDQAIGAVRNRHLTLCKKQVFEHQAQAQQV
QPPAEEEEDEYEPEYEPMDIPAVPVSQPLQTEPEGAGAAEIPPDLMTLGPFVLPQPLPLS
ETEAAEVGKEAVQRVFNMASTLDQPSKTAKDSGQTLGFGRLAASSFDRDSWLTLLTRLAT
RASAGLEADVEEEVKQIENGNKQVVNPSQRPSLGNGIRELLYRYVLEDFRVRLNVAISWM
NEEWYNYRVQLKYAAQQNGDGLNGVSVSSHYDYWVMRLLEGILPYLDARDKILIRFLSEL
PELNRALIKKVETLANDPERVNLCVQALHYLVLVRPPAKELCLDALEDLYKTVEEARPLI
TKILLKFRPEVLPEQPKQLTDNTKPQGQPQSTPDSGTEPGNTPRNSVSGYSSPGKVEGNA
TLSIPQQNGQALEPGKGDMPVDQTVTATG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggccttgccggtgagtagtctagtggagcaaatgtcccagctggacgcggcgcgaaat
ctcgttctcggtgacgctgctctctatccccagattgtccacggaataattcctataatt
ggccccaattcacgtctagaattgcgacgatggggtgccgaatttctcgcagagacattt
gcaagccccgcgtttcctcaaccagcaaagcaaaagcttgctaccgaagtccttgcgacg
atacaggatctgttgagtatatcgatggaagatactgcagtgctgaaaggagctatccag
gcctcagctagtgtttactcgctggtttttaggtatatcattgatcaccctgaagattcc
accctgtgggaaaggatgacagctatcaagcacgctatcctaaggaagtgggatgccact
tctcctggcgtcaaaatttgctgtatcaaatttgcccaaagagtcgtgcaagctcaaaca
cagggagttatctctgatccaaggcgtcctgagaaaaatgaaatctcactggcgcttgtt
ccaaagaaccatcctctcattcctattcctaacctcgaggcggaagcatcgggccttctt
gatagacttctgaatgtctttcatgagaattcgagtgaccctcttcttgtaaatgcaact
ttgaattctcttgcggtgttgattcgtatgcgtccgtccatctcaaacaagattatcaat
gccatcctgagcttcaacccgctcaaacaagcaaatgcgcccatgacgccaactgccaga
gtaaacatcaaatcaatggaacggacaaccagagcattgttagtcaatttgttgaagaga
aacccgagcaatcctctggcaggccgtattcaacagtacattgaacgaatggcacagtct
cgtaatgagatattcgaagaagcaacgcgcaagagagcacttcccacggagccaacggac
ttggttgatagtgccaaacgagcaagattgggcgtcaacaccccgccacaattgaaaatt
ccaccattgcctccgggcccaactagctttgcccagctctttactttgacagaggacgct
ggcctaacttcgtttgatgttaaacaattgccgctggacttacttgttaagatcacggtg
ccaattctaaatcgcatagacgcggaggctttggatcaagccattggtgccgttcgaaat
cgccatctcacactttgcaagaaacaagttttcgagcatcaggcacaggcacaacaggtg
caaccacctgctgaagaggaagaggatgagtacgagcccgaatatgagcctatggatatt
cctgcagttcctgtatcacaaccgctgcaaactgaaccagaaggagctggggctgcagaa
atccctcccgatcttatgacactagggccattcgtacttccacaaccccttccactgtcc
gaaacggaggctgccgaagtgggcaaggaggccgtccaaagagtgtttaacatggcctcg
actctcgaccaaccttctaaaacagctaaagactcagggcaaactctgggatttggaaga
ctcgctgcgagctcgtttgatcgagattcctggctaaccttactaacgcgtttggcaaca
cgggcatccgctggtttagaagcagatgttgaagaagaagtaaagcagatcgagaacggt
aataaacaagttgtgaacccatcccagcgaccttcattagggaacgggatcagggagttg
ctataccgatacgttttggaagattttcgggtgcggctcaatgttgcgatatcctggatg
aatgaagaatggtacaattatcgagtacagttaaagtacgccgcacagcaaaatggtgat
ggtttgaacggtgtgtcagtatcaagtcactacgattattgggtgatgaggcttctggag
ggcatcctgccgtatcttgacgccagggataagattcttataaggtttttaagcgagcta
ccggagttaaatcgcgctttgatcaaaaaggtggagacgttggcaaatgatccggagaga
gtcaacctgtgtgttcaagcgctacactaccttgttcttgtacgtcctccggcgaaagaa
ttatgtctggatgctctagaggatctgtataagaccgtggaagaagctcgccctttgata
accaaaatcctcctcaagtttcgccccgaagtccttccggaacagccgaaacagctgacg
gacaatacaaaaccacaggggcaaccacagtcaacccctgatagtggcactgaaccggga
aacaccccccgaaattcagtctctggatattcatcacccggaaaggttgaaggcaatgct
accctatctattccccagcagaatggacaagctttagagccagggaaaggggacatgcca
gttgatcagactgttacagccactggatga
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integrated database retrieval system
