Coccidioides immitis: CIMG_03019
Help
Entry
CIMG_03019 CDS
T01114
Name
(RefSeq) TruD family tRNA pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cim
Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cim03016
]
CIMG_03019
Enzymes [BR:
cim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CIMG_03019
Transfer RNA biogenesis [BR:
cim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CIMG_03019
Prokaryotic type
CIMG_03019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
DUF6656
Motif
Other DBs
NCBI-GeneID:
4563400
NCBI-ProteinID:
XP_001243578
UniProt:
J3KAF5
LinkDB
All DBs
AA seq
764 aa
AA seq
DB search
MDEHPSGDESRRKRVKLSEADAAATASSAAQRATGGVGRLRAATSDDAQALKEAEVGITE
FVSPDLPGFSGILKKRYTDFLVNEILPSGEVLHLQDINLPASLKASSQNPSVQKSGPEKE
TAVRENGEPQSADNQPGDRATDAAAGSAEAPAVEGGRANPEIPDEDRKILEQHLGPDVAQ
KVLKLYARALAKPNLRAGDLGRVKSDSVPDKEARTIVHQALRRIFGGRIESSTESDNSLL
ISSVPVRRLKAQMKGGVADNRRGKLGWSEVGGEYLHFTIYKENKDTMEVINFLARQMKLG
VRGFKFAGTKDRRGVTVQRACVFRVDAGRLANMNRILRNAAVGDFEYQKQGLELGELGGN
EFVITLRDCDFPVTLGEDPIAAASDLVSTAMENLREKGYFNYYGLQRFGTFATRTDTIGL
KMLQSDFKGACECILHYTPACLDAGQGKPREGDDILLSSDDISRAEAIHIFESTGQAGPA
LAKMPRKFTAESNIIKHLGRKQNDYMGALQTIPRNLRLMYVHAYQSLVWNFAVGERWRLY
GDKVVEGDLVLVNEFKDRDSDPTIAEEVDADGEAIVLPDTADSSVSVDSVFERARALTSE
EAASGKYTIFDIVLPLPGYDIIYPPNKMTEFYKTFMGSERGGKLDPFDMRRKWKETSLSG
SYRKILSRPGPDYSLDVRMYTDDNEQFIKTDLERIRQNAHNFPGKPINENAKVGDEDMDD
KQKEKLAVVVKFQLGASQYATMALRELMKTGGAKVYKPEYMGGR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcacccgtctggcgatgaatcccgtcggaagcgcgtgaagctttcggaagcc
gacgcagctgctacggcgtcttcggctgcacagcgggcaactggtggagttggaagactt
cgagcagcgacgtcggacgatgcgcaggcattgaaagaggcggaggtagggattacggag
tttgtaagcccagatctacctgggttctcgggcattcttaaaaaacgatataccgatttt
ctggtcaatgagatcctcccatccggtgaagtgctccacttgcaggacatcaatcttccg
gcgtctttaaaagcaagctcgcaaaatccttcggtgcagaagagtgggccagagaaagaa
actgcagtgcgggagaatggagaaccccaatcagcggacaaccagccgggtgacagagcc
actgatgcggctgcaggctcagcagaggcacccgctgtagagggtggacgggcaaacccc
gaaatccccgatgaagaccgaaagatcctagaacagcatcttgggccagatgtagcgcaa
aaggtcctgaaactttacgctcgtgcacttgccaaaccgaatctcagagctggagacttg
ggccgtgtgaaatcagactcagtaccggacaaagaggcgagaacaatcgtccaccaggct
cttcgacgtatatttggggggcggatagaatcttcaaccgaaagcgataactcgttgcta
atttcctctgtccctgttcgaagactaaaagcccaaatgaaaggtggtgttgcggacaat
cggagagggaagctgggctggagtgaagtcggaggcgagtatctccatttcactatctac
aaggagaacaaagatacgatggaggtgatcaattttctagctcgccagatgaaactaggc
gtgagaggttttaaatttgccggcacaaaggaccgacgtggcgtgacggttcaacgggcg
tgtgtcttccgcgtcgatgccggtagattggcaaatatgaatcgtatcctgcgtaacgct
gccgtcggagattttgaatatcaaaaacagggattagaactaggcgaacttggtggaaac
gagttcgtcataacccttcgagattgcgatttcccagtcactcttggagaggacccaatt
gcagccgcctcagaccttgtttctaccgcaatggaaaatctccgcgaaaaaggttacttc
aactactatggactacagcgcttcggtacttttgcgacccggacggacacgatcggactc
aagatgctacagtcagacttcaagggagcgtgtgaatgtattctacattatactccggct
tgcttggacgcaggacaaggaaagccacgcgaaggagatgatattcttctaagctctgac
gatatctcccgcgcagaagcaatccacatcttcgaatcaaccgggcaagccggtccagcc
ttagcgaaaatgccgagaaagttcacggccgagtccaacatcatcaagcaccttgggaga
aaacagaacgattacatgggcgccttacaaacgattccacggaacctgcggctgatgtac
gtgcacgcctatcaatctctcgtttggaacttcgccgttggcgaacgatggcgtctctat
ggcgacaaggtcgtcgagggggatttagtcctagtcaatgaatttaaagatcgtgattcc
gatcccaccattgctgaggaagtcgatgccgacggcgaagccatcgtcttaccggacact
gccgacagctctgtttctgtagatagcgtgttcgagcgtgcacgagcactaacaagcgag
gaagctgccagcgggaaatacaccatcttcgatatcgttttaccacttcccggatacgac
atcatctaccctcccaacaaaatgacagaattctacaagaccttcatgggcagtgagcgg
ggcggaaagctggatcccttcgacatgcgcaggaaatggaaagaaacgagccttagtggg
agctataggaagattcttagtcgaccaggccccgactattcgctcgatgtgaggatgtac
acggacgacaatgaacagttcatcaagactgacctagagcgaattcgtcaaaatgcccac
aactttccagggaagccaatcaatgagaacgccaaagttggagatgaggatatggacgac
aaacagaaagaaaagctggctgtggtagtcaaattccagcttggggcgagccaatatgct
accatggcacttagagagctgatgaaaactgggggagctaaggtttacaaaccagaatat
atgggtgggaggtga
DBGET
integrated database retrieval system
