Coccidioides immitis: CIMG_03141
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Entry
CIMG_03141 CDS
T01114
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cim
Coccidioides immitis
Pathway
cim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIMG_03141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_03141
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CIMG_03141
mRNA degradation factors
3'-5' decay
Pan complex
CIMG_03141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
4563736
NCBI-ProteinID:
XP_001243700
UniProt:
Q1E2S2
LinkDB
All DBs
AA seq
657 aa
AA seq
DB search
MASAGKPNIDDGRRGTSSPKLKGRDHAKDTLCRNVTIYGRCRYEDKGCVFNHDPSRVNDA
QHPERSSSKKRFNVDSPSFTPSATPLNGSSGLKKSATISPKAANAAPFLPKGVLSRSNAA
TPQSQPETSTPEWSIGEIQDFVPQGFDTSHVESIHGHGNGVLSTPAYDPFVSSSTPLGAS
GAVTHQVQPNPYSHDPSAIGGAAFFGAHNAFQQPVQYHLYAPIGPHNQNILGYQRNIHDL
FLPNSFREELQKKAAATLQTLPNSQLPTQIDYFHSLVPLDLSHQKNAAIFGYPSWVYKAQ
SSKDGNFYALRRLEGFRLTNEKAIRSVQNWKRVSCGSVVTVHDAFTNRSFQDSSLIFVTD
YHPLSKTLAEQHLADGQGRYQGRHTSGHIPEQILWSYVTQIANALKAIHSAGLAARVIEP
SKILLTGKNRIRLNACGILDVVQFDSQRPLADLQHQDLVNFGQLILTLGANSPSLMHNPT
KATEHFNRSYSAQLNNSVYWLLSGMQKDQERTIDIFISGISSQLMSTFDSSLHLDDQLIS
DLSRELENARLVRLLTKLNFINERPEYEHDRQWSENGERYFLKLFRDYVFHQVDAQNAPV
VDLGHVLTCLNKLDAGTDEKVTLISRDEQSCFIVSYKELKKAVEASFQALLKPARRI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcgggcaaaccgaacatcgacgatggcagacggggcaccagttctccgaag
cttaaaggacgcgatcacgcgaaagacacattatgtcgaaatgtgaccatatacggccgc
tgtcgttacgaagataaaggctgcgtattcaaccatgatccgtcacgggtcaatgacgcc
cagcatccggaaagaagtagcagcaagaagcgctttaatgtggactcacccagcttcaca
ccatccgctactcccctcaatggctcctccggcttaaagaagtccgctactatctctcca
aaggccgccaatgctgcgccgtttcttcccaaaggggtcctttcgagatcaaatgctgct
acgcctcagagccaaccggagacctctacacctgagtggtccataggcgagatccaagat
ttcgttccgcaagggttcgacacttcgcatgttgaaagcatacatggacacggcaacgga
gtcctttcaactcctgcttatgatccgtttgtctcttcttccacaccgttgggagcttct
ggtgctgtcacccatcaggtgcagcctaacccatactcccacgatccatctgcgatcggc
ggggcggctttttttggagcccacaacgcgttccagcagccggttcaataccacttgtac
gccccaattggaccacataatcaaaatattttaggttaccaaaggaacatccatgacctg
tttcttcccaattcctttcgagaggaattgcaaaagaaagctgcagctacccttcagaca
ctacctaattcgcaactccctacccagatagattactttcactctcttgtcccgcttgat
ctctcccatcagaagaacgccgccatttttgggtacccgagttgggtttataaggctcaa
tccagcaaagatggaaacttttacgctctcaggcgtctggaaggtttccgtttgacaaat
gaaaaagcgatccgatcagtgcagaactggaaaagagtgagctgtggcagcgtggtcact
gtgcacgatgcctttaccaatcgaagtttccaagatagctccttgatcttcgttacagac
taccatccgttatctaaaaccctggcggagcagcatttagccgatgggcaaggtcgctac
cagggtcgtcatacctccgggcatattccagagcaaattctctggagctatgtgacccaa
attgcgaatgcgctgaaagcgattcatagcgcgggtcttgctgctcgcgtcatcgaacca
agcaaaattctgcttaccggcaagaatcgaattagattgaatgcgtgcggcattttggac
gttgtgcaattcgattctcagcgacccctggctgatttgcaacatcaagacctcgttaac
ttcggacaattaatcctcacactcggggccaactcgccttcactaatgcataacccaacg
aaagccacggagcatttcaaccgcagttacagcgctcagctcaataattccgtctactgg
ctactcagtggtatgcaaaaagatcaagaacggactatcgatatatttatctccggtata
tcttcacaacttatgtcgacctttgattcgtcgcttcatcttgacgaccaacttatttcc
gatctaagccgggaattagaaaatgcccggctcgtccgcttgctcaccaaactcaacttc
atcaacgaacgaccagaatacgaacacgatcgtcaatggtcagaaaatggagaacgttat
ttcctaaaattattccgcgattatgtgttccaccaagtcgatgcgcagaatgcacctgtg
gtggatctaggtcacgtattgacctgtttgaataaattggatgcgggaaccgatgagaaa
gttaccttaatcagccgcgatgaacagtcgtgcttcattgtgtcgtataaggagctgaag
aaagctgtagaagcgtctttccaggcgcttctcaaaccagcgcggagaatctga
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