Coccidioides immitis: CIMG_03377
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Entry
CIMG_03377 CDS
T01114
Name
(RefSeq) DNA repair helicase rad15
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cim
Coccidioides immitis
Pathway
cim03022
Basal transcription factors
cim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CIMG_03377
09124 Replication and repair
03420 Nucleotide excision repair
CIMG_03377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cim03021
]
CIMG_03377
03036 Chromosome and associated proteins [BR:
cim03036
]
CIMG_03377
03400 DNA repair and recombination proteins [BR:
cim03400
]
CIMG_03377
Enzymes [BR:
cim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CIMG_03377
Transcription machinery [BR:
cim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CIMG_03377
Chromosome and associated proteins [BR:
cim03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CIMG_03377
DNA repair and recombination proteins [BR:
cim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CIMG_03377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
DEAD
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
4564171
NCBI-ProteinID:
XP_001243936
UniProt:
J3KB80
LinkDB
All DBs
AA seq
795 aa
AA seq
DB search
MKFFIDDLPVLFPYPRIYPEQYAYICDLKKTLDVGGHCVLEMPSGTGKTVSLLSLIIAYQ
QHYPSHRKLIYCSRTMSEIEKALTELRELMKYREQQLGYTEDFRALGLTSRKNLCLHPSV
RREKSGTVVDARCRSLTASFVKERKEKGEDVELCLYHENLDLLEPSNLVPPGVFTLDGLI
RYGEQHKQCPYFSARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKDCIVVFDEAHNIDN
VCIESLSIDITEDSLRKAGRGANNLGHKIDEMKRSDAAKLQKEYEKLVEGLREADQAREE
DQLMANPALPDDLLKEAVPGNIRRAEHFVAFLKRFIEYLKTRMKVLHAISETPLSFLSHL
KDLTYIERKPLRFCAERLTSLVRTLELMNIEEYRPLQEIATFATLVSTYEKGFLLILEPF
ESDTATVPNPVLHFTCLDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLGFQTVLQESY
SMTLARRSFLPMIVTRGSDQAQISSAFKIRNDPGVVRNYGNLLLEFSRITPDGIVVFFPS
YLYMESIISMWQGMGILDSIWNYKLILVETPDSQESSLALETYRTACCNGRGAILLCVAR
GKVSEGIDFDHHYGRAVLCIGVPFQYTESPILKARLRFMLENYRIREDDFLSFDAMRHAA
QCLGRVLRGKDDYGIMVLADRRFQKKRNQLPKWISQNILESETNLSTDMAVATAKSFLRT
MAQPFKAKDQEGISTWSLADLERHLEKQKGEAEKKYQEANQRDAALPAANGANNNGDLEM
YDDGIDEDLMMLDAE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttttattgatgatctgcctgttcttttcccatatccgcgaatatatcccgaa
cagtatgcatacatttgcgatctcaagaaaacgctggatgttggtgggcactgtgtcctg
gagatgccgtctggaactgggaagactgtgtctctattatcgttaattattgcatatcag
caacattatccatcgcacagaaaactaatatattgctctcgaacgatgtctgagatcgag
aaagccttgacagaattgcgagaattaatgaaatatcgagaacagcagttaggatataca
gaggattttagggcactgggtcttaccagcagaaagaatctttgtcttcacccctccgtg
aggcgagaaaagagtggtaccgtcgtggatgctcgatgtcggagcctaacggccagtttc
gtgaaagagagaaaggaaaaaggggaagatgtcgagctatgcctatatcatgagaatctt
gatttattagaaccaagtaacctcgttccgcctggcgtattcacgcttgatggtctcatt
agatatggagagcagcataagcaatgtccctacttttctgctcgacgaatgatgcccttc
tgcaatgttatcatatattcatatcattatctacttgatccgaaaattgcggagcgagtc
tcgaaggagctctcaaaagattgcatagtagtattcgatgaggcccataatatcgacaac
gtctgcattgagtctctcagcatcgatataaccgaggactcgctgcgaaaagctggtcgt
ggtgcaaacaatctgggtcataaaatagatgagatgaagaggtcggatgctgcgaagtta
cagaaggaatatgaaaagttagttgaaggcttaagagaagccgaccaagcgcgagaagaa
gatcagcttatggcaaatcctgccttaccagatgatctgcttaaagaagcagttccagga
aatattcggagagcagagcactttgttgcctttctgaagcggtttatcgaatacttaaaa
actcgtatgaaagtgctacatgcgatctctgaaacgccactctctttcctctctcatctc
aaagacctgacatatattgagcgcaagcctctaaggttttgtgcggaacgactcacatcg
cttgttcgaactctagaactgatgaatatcgaggagtatcgaccccttcaagagatagca
acctttgcgacattggtttccacctatgaaaaggggtttctcctcatccttgagcctttt
gaatcggacactgcaacagttccaaatcctgtgcttcactttacttgcttagatgcagca
atcgctattaaacctgtttttgagaggtttgggtcagtgatcattacctcgggtaccctc
tcgcctcttgagatgtacccaaagatgcttggattccaaactgtgcttcaggaatcgtac
agtatgactcttgcacgacgctcctttttaccaatgatagtcactcgtggctctgatcag
gctcaaatctcttctgccttcaagattcgtaacgaccctggggttgttcgaaactacgga
aatttactcttggaattttctcgcattacgcccgatggaatagtggtattcttcccatca
tacctttatatggaatctatcatcagtatgtggcaagggatgggaattttggattcaata
tggaattataaattaatcctcgttgaaactcccgattctcaagagtcgtctcttgcactt
gagacgtatcgcacagcgtgttgcaatggccgcggtgcgattctgctctgtgtcgctcgt
ggaaaggtttccgaaggaattgattttgatcaccattatggtcgtgcggtgctctgcatt
ggcgttccgttccagtacacagaatcacccattctgaaagcacgacttcggttcatgctg
gagaactaccgaatcagagaagatgattttctctctttcgacgccatgcggcacgcagcg
cagtgtcttggacgcgttcttcgaggcaaagatgattacgggattatggtccttgctgac
cgtcgtttccagaagaaacggaaccaactcccgaagtggatcagtcagaatattcttgag
agcgaaacaaacttgagcacggacatggctgtggcgacggctaagagtttcttgcgaaca
atggctcagccgtttaaggctaaagaccaggaaggtatctccacctggagtttagctgat
ctggagcgccatctagagaagcaaaagggcgaagctgagaagaaatatcaggaggctaac
caacgagatgctgcgctaccagctgctaacggtgcaaataataatggagatttggaaatg
tacgacgatggtattgacgaagacctcatgatgctggatgccgaataa
DBGET
integrated database retrieval system
