Coccidioides immitis: CIMG_03378
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Entry
CIMG_03378 CDS
T01114
Name
(RefSeq) DNA-directed RNA polymerase I subunit
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cim
Coccidioides immitis
Pathway
cim03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIMG_03378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cim03021
]
CIMG_03378
Enzymes [BR:
cim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIMG_03378
Transcription machinery [BR:
cim03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
CIMG_03378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
4564172
NCBI-ProteinID:
XP_001243937
UniProt:
J3KB81
LinkDB
All DBs
AA seq
1690 aa
AA seq
DB search
MASFTRPVSSTISGVDFEVLSDNEIKSVSVKRIHNTPTLDSFNNPVPGGLYDPALGAWGD
HVCTTCRLNAWSCAGHSGHIELPVQVYNVTFFDQLFRLLKAQCIYCHRFRMSKIQINTYV
CKLRLLQYGLVEEASTIGTMELRKGKHNKEDGESDSSEDEDEEDLIDRRNAYVQKCISGL
ASYKTRQNYMKMAKNPAAAEMRRNLVRDFLKDVASVKKCASCSGISPPYRRDRYSKIFRK
SLPQKAKAAMVAAGFQIPNPLVLMEEANRLSKKHKTIQKEDSVNGIIDDGNISVITETHG
AEQQVSMGNAVLAAVEDTGSSEIGGQLDDSQQYIPSSEVYASVRFLFEKEQEILDLVYDS
RPGSGRRSHVNADMFFIKNLLVPPNKYRPAAQQGPGQIMEAQQNTSFTRILKLCDQINQI
SRERQGDNGESISRIRSYRDLLHAIVQLQDAVNSLIDRDRNPAQGAAGIQNEDGIKQRLE
KKDGLFRKNMMGKRVNFAARSVISPDPNIETNEIGIPLVFAKKLTYPEPVTNHNYWELKQ
AVINGPDIYPGAAAVENELGQVVNLKFKSVDERIAIANMLLSPSNWKLKRSRNKKVYRHL
TTGDVVLMNRQPTLHKPSIMGHRARVLTGERTIRMHYANCNTYNADFDGDEMNLHFPQNE
IARAEAMQLADTDHQYLVATSGKPLRGLIQDHISMGTWFTSRDSLFDEEDYHQLLYSCLR
PENSHTVSEKIELMPPTILKPKPRWTGKQIISTILKNITPENRAGLNLIGKSSTPGDRWE
IGSEEGKVIVKDGELLCGILDKAQLGPSAGGLIHSVHEVFGHVVAGKLIGILGRLLTRFL
QMRAFTCGMDDLRLTKKGDEERKKQLKRGDNLGHEVALQYVTLDESPVEDKETELQRRLE
DVLRDDEKQAGLDSMFNSRTAGLSSDITAACLPSGLEKPFPWNQMQAMTVSGAKGSVVNA
NLISCNLGQQVLEGRRVPVMISGKTLPSFKPFETKLVAGGYVSGRFLTGIKPQEYYFHAM
AGREGLIDTAVKTSRSGYLQRCLIKGMEGLKAEYDNSVRDTTDGTLVQFLYGEDGLDITK
QKHLQDFSFLAQNYLSILSQVNGMDEFNKVNSEVAAKWNKSAIKKVKKTGQVDAKDPVLA
HYHPGANFGSTSESFATALKEYEKKNPDKLLKDKGQGIDGISKKDFEHIMNMKYMRSVVD
PGEAVGIVAGQSIGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREIVMTASTQILTPTMSA
NFYEQVSTKDRELFAKGISRLTLAEVVDKLSVHERISNRGNVKAKVYDIHINFFPAEEYT
QEYAIKVQDVLETLEKRFVPKLVKLTRAELKKRTSEKSLSDFSAAQPEIGASVGVVEEGP
RNTEGREAANDDDEDEDQDDAKRARSSQNRSNQVSYEAPDEDDQDIIRRQDSSELDSEDE
DESSENKENRPASGDEDVEMKDASDVEDEDKEREESIRDKHAEVTRFKFDPKKGTSCIIQ
LQYDVSTPKLLLLPLVENATRAAVIQFIPGLGSCTYVPEERDTPAHVLTDGVNLLAMRDY
QHIINMHTLYSNSIHHMLTLYGVEAARASIVREMDSVFKSHSIAVDNRHLNLIGDVMTQS
GGFRPFNRMGIVKDSTSPFMKMSFETTVRFLRDAVLERDWDNLAAPSSRIVMGRVSTVGT
GSFDVLAPVG
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctttactcgacccgtatcttccacaatcagtggagtggatttcgaagtcctt
tccgataacgaaatcaaatcggtatcagtgaagcgcatacacaatacgcccactctcgat
tcgttcaataaccccgtccctggaggtctatatgacccggctcttggtgcatggggtgat
catgtatgcacaacatgtcgattgaatgcatggtcttgcgctggccactcaggccacatt
gagctgccggttcaagtttataatgttacattttttgatcagctctttcggctcttaaaa
gctcagtgcatttactgccaccgattccgaatgtcgaagatccagataaatacatacgtt
tgcaaattgcggcttttgcagtatggtttggtggaagaggcttcgacgattgggacaatg
gagctccgaaagggcaaacataataaagaggatggcgagtctgacagcagtgaggacgag
gacgaagaagatcttattgatcgccggaatgcctatgtccaaaaatgcatctccggtctt
gcgtcttataagacgagacagaactatatgaaaatggccaaaaatccggcagcggcagaa
atgaggagaaatttagtgcgcgacttcctaaaagatgttgcaagtgtcaaaaaatgcgct
tcttgtagtggcatttctcctccatatcgaagagataggtactcaaaaatcttccgtaaa
tctttgccgcaaaaagccaaagctgccatggttgccgctggctttcagattccgaacccc
ctcgttttgatggaggaggccaaccgtctctccaaaaagcacaaaacgatacaaaaggag
gacagtgtcaatggaattattgatgatggcaatatcagtgttatcactgagacacatggc
gctgagcaacaagtgtcaatgggaaatgcagttttagcagcagtcgaggacacgggatcg
tcggaaatcggtggtcaactagacgattctcagcagtacataccatcatcggaagtctat
gcatctgtgcgatttttatttgagaaagagcaggagatattggatttggtctatgattca
aggcccggctcagggcggcggtctcatgtgaacgccgatatgttttttatcaaaaacctg
ctcgtgccccccaacaagtaccgcccggccgcacagcaaggtcctggtcaaattatggaa
gcccagcaaaatacttcctttactcgaattttaaagctatgcgatcaaatcaaccaaatc
agccgggagaggcagggtgacaatggtgaatcgatatcacggattcgaagttatcgtgat
ctcctccacgcaattgtacagttgcaagatgctgtcaatagtttaattgaccgtgacaga
aatcctgcgcaaggagcagcaggtattcagaatgaggacggtatcaagcaaaggctagaa
aagaaggacggcctgttcagaaagaacatgatgggaaaacgtgtcaattttgcagcccga
agcgttatatcccccgatccaaatatcgaaacgaacgaaattggaattcctcttgtcttt
gccaaaaagcttacctatccagagccggtgacgaatcacaattactgggagctcaagcaa
gcggtgatcaatggtccagatatctatcctggtgctgcagctgtcgaaaatgaactcgga
caggttgtcaatttgaaattcaagtctgtcgatgaacgtattgcaattgcaaatatgctt
ctatctccatcaaattggaaattgaaacgatcgaggaacaagaaagtctatcgacaccta
acaactggagatgtagtactgatgaaccgacagccaacactgcataaaccatccataatg
ggacatcgtgctagagtattaactggagaaaggacaattcgaatgcactacgccaattgc
aacacatataatgcagactttgacggtgacgaaatgaacttgcatttccctcaaaatgag
attgcacgagctgaggccatgcaactggctgatacagaccatcaatatcttgtcgcaact
tccggaaagcctctccgtggcctaatccaagatcatatttccatgggaacttggttcaca
tctcgggacagtctttttgacgaggaagattaccaccagcttctttatagctgtctgcgg
ccagagaactcgcacacagttagcgagaagattgaacttatgccacctaccattcttaag
cctaaaccaagatggaccgggaagcagattatctctaccattttaaaaaatattactccc
gaaaatcgagctggtttgaatctaataggcaagtcctccacgccaggagacagatgggag
ataggctctgaagaaggcaaagttatcgtcaaagacggagaactactgtgtggtatattg
gacaaggcccagcttgggcctagcgccggtggtcttatccactcggttcatgaggttttt
gggcatgttgttgccgggaagctcatcggtattctgggacgactgcttactaggttcttg
caaatgcgcgcctttacttgtggcatggatgatcttcggctgaccaagaagggtgatgaa
gagcgtaaaaagcaactgaagaggggtgacaatcttggccacgaggttgccctccagtac
gttaccctcgacgagagccccgttgaggataaagagaccgagttgcaaaggcgactggaa
gatgtacttcgggacgatgaaaagcaagctggcttggatagcatgttcaactccagaaca
gctggactttcatccgatatcacggctgcttgcttgccttctggccttgaaaagcctttc
ccatggaatcaaatgcaagccatgacggtgtctggtgctaaaggttcagtggttaatgca
aacttgatttcctgcaatttgggtcaacaggtgctggaaggccgtagagtgccagttatg
attagtgggaagaccttgccatccttcaaaccgtttgaaaccaagctagtggccggtggt
tatgtctctggtcgtttccttactggaatcaagcctcaagagtattatttccacgccatg
gccggacgagaaggtcttatcgacactgcggttaagacctctagatccgggtacctccaa
cgctgtttgatcaagggaatggaaggtttgaaagcagagtacgataactcagtgcgggat
actacggacggaactcttgtgcaattcctttacggagaagacggtttggatatcacgaag
caaaagcatcttcaagatttcagtttcttagctcagaactacttgtccatactttcacaa
gttaatggcatggacgagttcaacaaagtcaatagcgaagttgctgccaagtggaacaag
agcgccatcaaaaaggttaaaaagactgggcaagtggatgctaaggatccagtcctggct
cattatcatccaggagctaatttcggaagcacatctgaatcttttgctactgcccttaaa
gagtacgagaagaagaatcccgacaagcttttaaaggacaagggccaaggaatcgatggc
atctctaaaaaggactttgaacatatcatgaacatgaagtatatgcgttcggtggtggat
cctggtgaagccgttggaattgttgccgggcagtctattggagagccatctactcaaatg
acgctgaatactttccatttggctggtcactccgcgaaaaacgtcacgcttggtattcct
cgacttagggaaattgtcatgacggctagtactcagatcctaaccccgactatgtctgcc
aatttttatgagcaagtttccaccaaagatcgggagctatttgccaaaggcattagcaga
cttactcttgccgaggttgttgataaactctcggtgcatgagcggatatccaaccggggt
aacgtgaaagcgaaagtttatgatatccatattaacttcttccctgctgaagagtatacc
caagagtacgctatcaaagttcaagatgtgcttgaaacattggaaaaacgattcgttccg
aaacttgtcaagctaacaagggcggaactcaagaaacgaacaagcgagaagtccctctct
gatttctctgctgctcagccagaaattggagcttctgtcggagtcgtcgaagagggccca
cgaaatactgaaggaagagaggccgccaatgacgatgatgaagatgaagatcaagacgat
gcgaagagagcaagatcgtcgcaaaacaggtcgaaccaggtttcatatgaagcccctgat
gaagatgaccaagacatcattcggcgccaagatagctcagagctagactccgaagatgaa
gatgagagcagcgaaaacaaggagaatagaccggcatcaggtgatgaagacgtcgagatg
aaagacgcttctgatgtggaagatgaggacaaagaacgcgaggaatcgatccgagacaaa
catgctgaagtcactcgattcaaattcgatcccaagaaaggcacgtcgtgcattatccaa
cttcagtatgacgtctcaacgcccaagctccttctgctgcctcttgtagagaacgccact
cgcgcagccgttatccaattcatccccggccttggcagctgcacatacgtgcccgaagaa
agagatacaccagcccacgtacttactgacggtgtcaatctcctcgctatgcgcgattat
cagcacattatcaacatgcacaccctgtacagcaattccattcaccacatgcttacactc
tatggtgtcgaggcagcgcgtgcaagcattgttcgcgaaatggactccgttttcaagagc
cacagcattgccgtggataaccgccatctgaacctcattggcgacgtgatgactcagagt
ggaggattccgcccattcaaccgtatgggcattgtgaaagacagtacatcaccgtttatg
aagatgagtttcgaaactactgtacgattcttaagggatgcagtcctagagcgtgactgg
gacaatcttgctgcacctagtagcaggattgtcatgggaagagtgagcactgttggtact
gggtcttttgacgttcttgcgccagttggataa
DBGET
integrated database retrieval system
