Coccidioides immitis: CIMG_03496
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Entry
CIMG_03496 CDS
T01114
Name
(RefSeq) ATP-dependent rRNA helicase SPB4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cim
Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cim03009
]
CIMG_03496
Enzymes [BR:
cim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CIMG_03496
Ribosome biogenesis [BR:
cim03009
]
Eukaryotic type
Pre-60S particles
Helicases
CIMG_03496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
DUF3106
Motif
Other DBs
NCBI-GeneID:
4564127
NCBI-ProteinID:
XP_001244055
UniProt:
Q1E1R7
LinkDB
All DBs
AA seq
653 aa
AA seq
DB search
MASKKKERGPPPHSRSWQALTPPLSEWILDAVAAMGFTRMTPVQASTIPLFMGHKDVVVE
AVTGSGKTMAFLIPVVEKLLRLEAPIKKHHVGAIIVSPTRELAEQIYKVLLSLLAFHAPS
AAAIQPSTSDETADGETTLPSYPSSTLKVVPQLLLGGATTPAQDLSTFLKRSPNLFVSTP
GRLLELLSSPHVHCPQTSFEVLVLDEADRLLDLGFKDDLQKTLARLPKQRRTGLFSATVS
DAVDQIIRVGLRNPVKIAVKVKGAPGTEEKRTPASLQMTYLLTRPSHKIPAIRQILNSID
NTPQKTILYFSTCAAVDYWSHVLPSLLPEIFVTLPLHGKHPPNVRQKNFSRFTNSVSPSV
LLTTDVAARGLDIPLVDLVIQFDPPTDPKAYLHRCGRAGRAGRRGLSVILLCPGREEDYI
PFLEVRKTPVSLLESPPVALSDTLATEATSKIRETVLRDRALHDKAQKAFVSWVRSYTKH
QSSSIFRITDIDWEEAGRAWGLLKLPKMPELQKFSGDRTLGVTLDWDKYSYKDKQREKHR
QESLNSATTHNPLKRPAPSSSSNNDTAPWSKTLEKKSDKEKRRERKRAKKEREHWEKMTE
EEKTKSRETHQMLEELRKKNRQELNAKSHTSSSVLSKPQEAELDGESEFEGFD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaaaagaaggagcgagggcctccgccgcattcccgctcttggcaggccctg
acgccgccgctgtcggaatggatcctcgacgccgttgcggcgatgggcttcacccgcatg
actcccgtccaggcgtcgacaatcccgctcttcatgggccacaaggatgtcgtcgtggag
gccgtgactggcagcgggaagaccatggcgtttctgatccccgtcgtcgagaagctccta
cgcctggaagctccgataaaaaagcaccacgtcggagctatcattgtctcgccaactaga
gagttagctgagcagatatataaagtccttctttccctcctcgcgttccacgcgccctcc
gctgcggccatacagccttcaacctccgatgagacggcagatggcgaaaccacccttccc
tcctatccctcctcgacactgaaagtagttccgcagctactccttggcggtgcaactact
cccgctcaggatctaagtacatttttgaaacgctcgccgaacctctttgtctccactcct
ggcaggctccttgaactcctttcctccccgcatgtacattgtcctcagacttcttttgaa
gttctcgtcctagatgaagccgacaggctactggatctcgggttcaaggatgacctgcaa
aaaacacttgcccggctgccgaaacaaaggcgaaccggtttgttcagtgccaccgtgagc
gacgccgtagatcagatcatccgagttggtttgcggaatcccgtgaaaattgctgttaaa
gtaaaaggggcacctggcacagaagagaagcgtaccccggcaagtttgcagatgacatat
ctcctgacacgcccctctcataaaatccccgccatcaggcagatcctcaactcgatagac
aatacaccacagaaaactattctatacttttcgacatgtgctgcagtagactactggagc
cacgtcctaccctccctactccccgaaatattcgtcaccctaccccttcatggaaagcac
ccacctaatgtccgacaaaagaacttcagccgttttaccaattcagtatctccatcggtc
ttactaaccaccgatgtcgccgctcgaggattagatatcccgcttgttgacctggtaatc
cagtttgatccaccaaccgatcctaaggcatacctccaccgatgcggtcgtgctggccgg
gctggacgtcgtggcctaagtgtcatattgctctgtcctggccgagaagaagattacata
cccttccttgaagtccgaaaaacacctgtatcacttcttgaatctcctccggtagcctta
tccgacactctcgcgacagaagcaacaagcaaaatccgggaaactgtccttcgtgaccgt
gcattgcacgacaaagcccagaaggcctttgtcagttgggtccgcagctacactaagcat
caatctagtagcatctttcgtatcacggacatagactgggaagaagcaggtcgcgcgtgg
ggcttgctcaagctgccgaaaatgccagagctgcagaagttctctggggacaggacactc
ggagtaaccctggactgggacaaatattcctacaaagataagcagcgagagaaacaccgt
caagaatctctaaactctgccactacccataaccccttgaaacgccccgccccatcatcc
tcttcaaacaacgacacagcgccatggagcaagactctcgaaaagaaatccgacaaagaa
aaacggcgcgaacgcaaacgcgcaaagaaagagagagaacattgggagaagatgacggaa
gaagagaaaaccaaatctcgcgagacacaccagatgcttgaagagctccggaaaaagaac
cggcaagagctcaacgcaaaatcccacacttcttctagcgttctttcaaagccgcaagaa
gcggagctcgatggcgagtcggagttcgagggcttcgactaa
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