Coccidioides immitis: CIMG_03513
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Entry
CIMG_03513 CDS
T01114
Name
(RefSeq) U3 small nucleolar RNA associated protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cim
Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cim03009
]
CIMG_03513
04121 Ubiquitin system [BR:
cim04121
]
CIMG_03513
Ribosome biogenesis [BR:
cim03009
]
Eukaryotic type
90S particles
Other 90S particles
CIMG_03513
Ubiquitin system [BR:
cim04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CIMG_03513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
NBCH_WD40
WD_LRWD1
PEP5_VPS11_N
eIF2A
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
4564390
NCBI-ProteinID:
XP_001244072
LinkDB
All DBs
AA seq
447 aa
AA seq
DB search
MKIKALSRSAASQQTPGTGATRLARNLDPAQHPFERAREYTRALNATKLERMFAAPFIAQ
LGGGHVDGVYSLAKDPSSLERFASGSGDGVVKVWDLTSREEIWQAQAHENIVKGMCWTSD
RKLLSCAADKTIKLFDPYNSASESPPLATYLGHGAFTAVSHHETHPSFAASSSVISIYDL
SRPSSTPSQTLHWPSSVDTITSLAFNRTETSLLASTATDRSIIMYDLRTSSPLTKVVLTL
ASNAIAWNPMEAFNFAVANEDHNAYIFDMRKMDRALNVLKDHVAAVMDVEFSPTGEELVT
ASYDRTVRLWNRSRGHSRDIYHTKRMQRVFSAKFTPDNKYILSGSDDGNIRLWRAEASSR
SGIKSARERQKLQYDEALKRRYAHMPEIRRIKRHRRLPKAVKKAGEIKNEEINAIKRREE
NIRKNSKKGSLPARRSEREKMVLATEK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaggctctttcacggtctgctgcgtcgcagcagacgcccggaacaggagct
actaggctcgctcgcaacctcgatccggcacagcatccattcgaaagagcaagagaatac
acaagagctctcaatgctaccaaactagagcgcatgtttgccgctccttttattgcccag
cttggagggggccatgttgatggtgtatattctttggcaaaggacccaagttccttagaa
cgctttgcaagcggaagtggtgacggcgtggtaaaagtatgggacttgacgagccgcgag
gagatttggcaggctcaggctcatgagaacattgtcaaaggaatgtgctggacatcggat
aggaagctactatcatgcgccgccgataaaaccatcaagctatttgatccttataattcg
gcctctgagagtcctccgttggcgacgtacctggggcacggagcttttactgccgtttcc
catcacgaaactcatccctcattcgctgcttcgtcgtcagtgatatctatatatgacctc
tctcggccgtcttctacgccatctcaaacgcttcactggcccagtagtgttgatactatc
acttcactcgcatttaaccggacggaaacttctctcctagcatcgacagctaccgaccga
tctataataatgtacgatctacgaacatcctctcctcttacgaaggtcgttcttactttg
gcttcaaatgctatcgcttggaatccaatggaagcgtttaatttcgctgtggctaacgag
gatcataacgcctatatctttgacatgcggaagatggaccgtgctttgaatgttcttaag
gaccatgttgcagctgtgatggatgttgagtttagtccaactggcgaggaacttgtcacc
gcgtcctatgaccgtacggttcgactatggaatcgttctcgcggacattctcgggatata
taccatacaaaacgaatgcagagggttttctcggccaaattcactccggataacaaatac
attctttctgggtctgatgatggtaatattcgcctctggcgcgcagaagcatcgtcccgg
agtggaatcaaaagcgctcgtgagcgtcaaaaactccaatatgacgaggctcttaagcgt
agatatgcacatatgcctgagattcgtcgtatcaaacgtcatagacgtctgccaaaggct
gtcaagaaagctggcgagatcaaaaatgaggaaattaacgctatcaagagaagggaggag
aatattaggaagaacagcaaaaagggttcgctacctgcccgacggagtgagagagagaag
atggtcctggctacggaaaaatga
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