Coccidioides immitis: CIMG_03795
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Entry
CIMG_03795 CDS
T01114
Name
(RefSeq) mRNA 3'-end-processing protein rna14
KO
K14408
cleavage stimulation factor subunit 3
Organism
cim
Coccidioides immitis
Pathway
cim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CIMG_03795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_03795
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CIMG_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
HAT
Motif
Other DBs
NCBI-GeneID:
4562958
NCBI-ProteinID:
XP_001244354
UniProt:
J3KC44
LinkDB
All DBs
AA seq
1088 aa
AA seq
DB search
MALSQPEAQATEAEHQPDEQHDPPLKDSSFGYLLFLFPVSSSLNNFLSAFSLNPLVLILS
AKIFGHWPSIRFNMAEDEAERAFFRSQALNMENYETGDDQGANGSDTDEYDPSKTVENEF
STGLANPQTTMPSYSRVSEYSAPDSVQRGDVSHDFSQVQDPGGAFPSKSPSRSESRTSAS
AYPSGLAVDANSQATAGDVQEEEVGDGDGGDAEYEPPGALDHVQDTTSTPADIQQRSFSQ
NSNEIVSPFHVSQQQTVSEKTTPHDVSNNLSSTAIPTGAPVQSDTASKPDEAALAVPSIA
QSTNSSIAATPIPTPVSKGRLPHDRVGILEDRIQADPRGDTEAWLELISEHRSRNKLDSA
RQVYERFFKVFPWAAEQWVAYASMESEHNELYRLEQIFNKSLLNIPSVQLWSVYLDYVRR
RNNLTTDTTGQARRIISSAYDFALQNIGIDKDSGPVWVDYIQFIRSGPGNIGGSGWQDQQ
KMDLLRKSYQRAICVPMQAVNTLWKEYDQFEMGLNKLTGRKFLQERSPSYMTARSSYTEL
QNITRDLVRASLAKLPPAPGFAGHAEYMKQVGIWKRWIKWEKDDPLVLKEEDAGAYKSRV
LYVYKQALMALRFMPDLWFEAADFCFQNGMDAEGTDMLKQGIEANPESCLLAFKRGDQLE
ITTASEQDRSKRGTLVREPYDKLLDALYDLITKAKVKEAQDIAQIEEKFAEEGMQPTGRG
NDEEEEEDESHESKAKTAAKAAEIETAKKTHGEHIRLLSKTISYAWIALMRAMRRIQGKG
KPGEIAGSRQIFADARKRGRITSDVYIASALIEYHCYKDPAATKIFERGAKLFPEDENFA
LEYLKHLIDINDVTNARAVFETTVRRLASNPENVAKAKPIFAFLHEYESRYGDLTQIISL
EKRMRELFPEDPTLQQFSHRYSGPLFDPTSAQFIISPTQTRLKQDVPLEEFHSRQESPAG
PVYLSPKRAFPVDDLDDDFRPRKFMRAESPLKGAAGRRLDQKRGHQANGSGANNVGQARA
PAQAQPLPRDIVYLLSIIPPASTYDSVRFIPENMVNLLRQVDIPSSVSQLRPPIHNPTGA
GRPQYGGR
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagtcaaccagaggcgcaagcaactgaggccgagcatcagccagacgaacaa
cacgaccctcccttgaaagactcttccttcgggtatctgctcttccttttccctgtttct
tcatctctaaataattttttatcagcattttccctcaatccactggtcctaattctctct
gcaaagatctttgggcattggccctcgattcgtttcaacatggctgaagacgaagctgag
cgtgccttttttcgatctcaagcattgaatatggaaaactatgaaactggtgacgatcag
ggggcaaacggttcagacacagatgaatatgacccttcaaagacagtggaaaacgagttt
tctacaggcttagccaatccccaaactaccatgccaagttattctcgtgtttctgagtat
tctgctcccgattctgtgcagcggggggatgtctcccatgatttctctcaggttcaagat
ccaggtggcgcattcccttcaaaatcgccttccagatccgaatccagaacctcagcttcg
gcatacccttccggccttgctgtggatgcgaacagtcaagcgacagctggggatgttcaa
gaagaggaagttggtgatggagacggaggtgatgctgaatatgaaccaccaggagcatta
gatcatgttcaggatacgacatcaactcctgcagatatacaacagcgttctttttctcag
aattctaatgaaattgtttctccatttcatgtatcgcagcaacagactgtctcagaaaaa
accactcctcatgatgtttccaataacttgtcttctactgctattccgactggtgctcca
gttcagagtgataccgcttctaagcctgacgaggcagctctggcggttccttctattgct
caatcaaccaacagctctatcgctgccactcccattccaacaccggtgtcaaaaggccgt
ttgccgcatgaccgagtcggaattttggaggatagaatccaagccgatccccgtggcgat
acagaagcatggttagagctaatcagcgaacatcgcagtcggaacaaactcgacagcgca
cgtcaagtctatgagaggtttttcaaagtgtttccatgggcagccgagcaatgggtagca
tatgctagtatggagtccgaacataatgaactttaccgtttggaacagattttcaacaaa
agtcttttaaacattcccagtgtccagctgtggtccgtttatctcgactatgttcgacgg
cgtaataatctcacaacggatacgactggtcaagcacggcgtattatttcctcggcttac
gattttgcgttgcaaaatattggaattgataaggattcggggccagtttgggtggattac
attcaatttatcaggtccggacccggaaacatcggtgggtctggctggcaggatcaacaa
aagatggatttactcagaaaatcatatcagcgagccatatgtgtcccaatgcaagcagtc
aataccctttggaaagagtatgatcaatttgagatgggtctcaacaaattaacgggtcgt
aaatttttgcaagagagatccccgtcgtacatgacagcacgaagctcgtatactgaattg
caaaatattactcgggatttggtccgagcctcgctggccaagttgccccctgctcctgga
tttgccggtcatgcagagtatatgaaacaggttggaatctggaaacgctggattaaatgg
gagaaagacgacccgctggtacttaaggaagaagacgccggagcatataaatctcgtgta
ttatatgtttacaaacaggcgcttatggcgctgaggttcatgcctgacttgtggtttgag
gcagcagacttttgcttccaaaacggtatggatgccgagggaaccgatatgctaaagcaa
ggaattgaagcaaatcctgagagctgcctgcttgcattcaagcgtggtgatcagcttgaa
attacaactgcttccgaacaagatcgttcaaaacgcggcacactggttagggagccatac
gacaagctccttgatgccctctatgacctaatcacgaaagcgaaagtgaaggaggcacag
gatattgcacagatcgaagaaaaatttgcagaagaaggcatgcagcccactggtcgaggc
aacgatgaagaagaagaagaagacgaaagtcatgaatcgaaggcaaagactgctgcaaaa
gctgctgaaattgaaacggcgaagaaaacccatggcgaacatatccggctgctctcgaaa
acgatatcatatgcctggattgcactcatgcgggccatgcgtcgtatccagggcaaaggc
aagccgggtgaaattgctgggtctcgacagatctttgccgatgcacgcaaacgtgggcga
atcacaagtgatgtgtatatcgccagtgcactcatagaatatcactgctacaaagacccg
gcggcaacaaagatttttgagcgaggagcaaaactcttccccgaggacgagaatttcgcg
ctggaatatctaaagcacctcatcgatataaatgacgttaccaatgcaagagcggtcttc
gagaccacagtccgcagactagcgtcaaaccctgaaaacgttgcaaaagcaaaacccatt
tttgcatttctccatgaatatgaatcccgttacggtgatctcacacaaattatcagtttg
gagaagagaatgagagagctattccctgaagaccctactttgcaacagttttctcatcgt
tattcgggaccgttatttgaccctacttccgctcagttcatcatctcccccacacaaaca
agactaaaacaggacgttccgctcgaggaattccattcacgtcaggagtcacctgcaggc
cccgtatacctgtctcccaagcgtgcgttcccagtggacgatctcgatgacgacttccga
cctcgaaagttcatgagagcagagtcgccattgaaaggtgctgcgggtagacggttggat
cagaaacgaggacaccaagccaacggtagcggtgcaaacaacgtcggccaggcacgagcg
ccagcacaagcacaaccgcttccgagggatatcgtctaccttctcagtattatccctccg
gcgtcgacctatgattcagtgaggtttataccggagaatatggtaaatttgcttaggcag
gttgatatcccatcttcagtttcacagttacgaccacctattcacaatccgacgggtgct
ggacgtcctcaatacggtggtaggtag
DBGET
integrated database retrieval system
