Coccidioides immitis: CIMG_03878
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Entry
CIMG_03878 CDS
T01114
Name
(RefSeq) TBP associated factor
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
cim
Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cim03021
]
CIMG_03878
Transcription machinery [BR:
cim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
CIMG_03878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
HEAT_ECM29
CLASP_N
TIP120
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
4562526
NCBI-ProteinID:
XP_001244437
UniProt:
J3KCB2
LinkDB
All DBs
AA seq
1905 aa
AA seq
DB search
MGSRLDRLVILLETGSTPVIRNTAAQQLADVQKQHPEELFNLLGRILPYLRSRSWDTRTA
AAKAIGGIVGYAPKFDPNADDSSPSKEEEAENAKVKTESEAADELLSLETLDIVSILKHG
QKLLGSAGKEYEISLAGLDPAARLQKQKRTLTARLGLAGEYIEESLINDHDINDGTVPKG
SSGTGCVPKLDTSVSTLARQHSITNIPPQSATSPNDPQTPMNGEEHGLSKRQLNQLKRKN
KQSARMGGSKVRVVDLSVRKGSDIVATPSVTTPHPIKKESGEENEDEKVDYFSLKREGPD
DDSKLVTEFKGAVVPERSFIQTDAEEQNLEWPYERMCEILMVDLFDHAWEIRHGAAMGLR
EVIRVQGAGAGRLWGKTRAENDELNHCWLNNLACRLLCVFMLDRFGDYISDNVVAPIRET
VGQTLGALLSHLPSKSVVLVYHILYRIIMQKDLDTIKPVWEVCHGGMIGLKYLVAVRNDI
LFEDSAVLDGVIEAVMKGLGDFDDDVRAVSAATLIPIADDFVKLRPGALDSLIDIVWNCL
SNLQDDLSASTGSVMDLLARLCIFPQVLEAMKVNAAHDPESSFGNLVPRLFPFLRHTISS
VRSAVLRALLTFLKLENEGQDSWVDGKALRLVFQNLLVERHESVLKLSLQVWSEMLRVLG
SQGIFSTDQLVTPVQPLISATMNPFGVPRYPIPMDLSLFIRPSGSAFTSAPSIPRKPSVH
TPTEPAPRGRRRKTEKKEAPVVMVHNVDGHMLQGDIDLVGTDTMVRSKIYAAIALGEFLA
TWDSANEFNLWDRVLPALNWPGSTSQLVAAMVVEEYTKRQGPASRHASLLSQWLNPLIEN
ERPSWYGDISCYLHIARAQCHSLLNAFRDHAHVSQSRLPTLAVVVQGDPEAGPNAFSIHD
AENVVGSDFERLKRDLTPTQRITALQVLNDSRASAQAAVKEAKEVKEQRDMRIRAAIAGS
LVALKDIPKKPSHIIKAMMDSVKKEENIELQQRSASAIASLVEYYTTAAKRGPVDKVIAN
LVKFCCVDTSETPEFHHNAHLEKAILSLRKEEDKKDPVDAAKFERESREARIMRRGAKES
LEQLATRFGAQLLEKVPNLAILIQNALKQALSGDLPKNIRDPFNELGQETVDGLSILRAL
SPKFHPGLYPWVTELMPVIVKALQCELSVIRYAAAKCFATLCSVMPVEGMTMLVEKVLPS
ISNALDVNCRQGAIECIYHLIHVMEDKILPYVIFLIVPVLGRMSDSDNDVRLLATTAFAT
LVKLVPLEAGIPDPPGLSEELLQGRDRERKFMAQMLDVRKVEPFEIPVGIKAELRSYQQE
GVNWLAFLNRYNLHGILCDDMGLGKTLQTLCIVASDHHLRAEEFSRTQAPEVRRLPSLII
CPPSVSGHWQQEIQQYAPFLTCVSYMGPPAERARHRPRLTEVDIVITSYDICRNDNDIFA
PMAWNYCVLDEGHLIKNPRAKITLAVKRIQSNHRLILSGTPIQNNVLELWSLFDFLMPGF
LGTEKVFLDRFAKPIAASRFSKSSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPP
KILQNYYCDPSELQRKLFEDFTKKEQKELAKKLGSTEKEAKEHIFQALQYMRRLCNSPAL
VVKEGHRQYQEVQRYLANKNSNIRDISHAPKLTALRDLLIDCGIGVDLSVEGELNTAASY
VSPHRALIFCQMKEMLDIVQNDVLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDPSYDV
LLLTTSVGGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLE
EKILNLQRFKIDVASTVVNQQNAGLSTMDTDQLLDLFNLGETAETAEKPSQDAGLNGNEV
DMVDIDGEVKEKGKKGWLDDLGELWDNRQYEEEYNLDSFLASMKG
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgaggctcgatcgcttagtcattcttttggagactgggagcacgccagtcatc
agaaacactgctgcccagcagctggccgatgttcagaagcagcatccagaggagctgttc
aacctgcttggccgcatcctaccatatcttaggtcgcggtcatgggataccagaacagca
gctgccaaggcaattggcggcatagtcggctatgctcccaagttcgacccaaatgcggac
gacagttcaccttccaaggaggaggaggctgaaaatgcaaaggtgaaaaccgaatcagag
gctgcggatgaactcctaagtttggaaactctggatatcgtatcaatcctcaagcatggc
caaaagttgctcggaagtgctggcaaggagtatgagatttcccttgctggcttggaccca
gcggcaaggttgcagaaacaaaagagaacgctgactgcgcgccttggattggcgggtgaa
tatatcgaagagagcttgatcaatgatcacgacatcaatgacggcaccgtcccaaaaggc
tcgtccggaacgggatgcgtgcccaaactggatacgtcagtctcgacccttgctcgtcaa
catagcatcacaaacattcctcctcaatcggcaacttcccctaatgatcctcaaacgccc
atgaacggtgaggaacatggacttagtaagcgccagttgaatcagttgaaacgaaagaac
aagcagtctgcgagaatgggaggcagtaaagtcagagttgttgacctctcggtcagaaaa
ggctctgatatcgttgcgacaccgtctgtgactacgcctcatcccatcaaaaaggaaagc
ggcgaggaaaacgaggatgaaaaggtggattatttctccctgaaaagagaagggcctgac
gacgactcaaaattagtcaccgaattcaaaggggccgttgtgcccgagagatcgtttata
cagaccgatgccgaggaacaaaatctagaatggccttatgaacgcatgtgtgaaatcctc
atggttgacctattcgaccatgcttgggagattcgacacggggctgccatgggcctccgg
gaagtaatccgtgttcagggagctggtgcgggccgtctatggggcaaaacaagagctgag
aatgatgaactaaatcattgttggcttaataaccttgcgtgtcgacttctttgtgtattc
atgcttgaccggtttggcgactacatctcagataatgttgtagctccaattcgcgaaacg
gttggtcagacgctcggtgcacttttgtcccatttgccctcgaagtcggttgttttggtc
tatcatattctgtacagaatcatcatgcaaaaagatctggacactatcaagcccgtttgg
gaagtgtgccatggagggatgatcgggttaaaatatttggttgccgttcgaaacgacatt
ttattcgaagactccgccgttttggatggcgtaattgaggctgtgatgaaaggcctgggc
gactttgatgatgacgttcgtgctgttagcgcagccaccctaattccaattgccgatgat
ttcgtgaaactgcggccaggagccctagattccctaatcgatattgtatggaattgcctc
tccaatttacaagacgaccttagtgcgagtaccggctcagtcatggacctcctcgcaagg
ctatgtatattcccacaagtgctggaagccatgaaagtgaacgccgctcacgatcccgaa
tcctcctttggcaaccttgttcctcgacttttcccgttccttcgacatactatttccagc
gtacggtctgctgtccttcgcgcccttcttacattcttaaaactagagaacgaaggtcag
gattcatgggtggacggcaaagcactaagacttgttttccagaatcttcttgttgagcgg
cacgaaagtgttctcaagttatccctgcaagtctggtcagaaatgcttcgagtacttggt
tctcaaggcatattcagtacagaccaacttgtcactccggttcagccactcatttcggca
actatgaatccgtttggcgttccacgttatccaatcccaatggatctgtctctctttatt
cgaccttctggatcagctttcacatctgcgccttctatcccaaggaaaccgtcagttcac
acacccaccgaacccgcaccgcgaggcaggagaagaaagacggaaaagaaagaagcgccc
gttgtgatggtgcataatgtggacggccacatgctccaaggagacatcgacttggtcggt
actgatacgatggtaagatcgaagatttacgctgccatcgctctcggtgagtttttggca
acgtgggattctgctaatgagttcaacttgtgggatcgcgttttacctgctttaaattgg
cctggctctacttcccaactggtggccgccatggtggtcgaagaatatacaaagcgccag
ggtcctgcttctcgacatgcttctctactttcgcaatggctcaatccattgatagagaat
gaacggccgtcatggtatggcgacatttcatgctacttgcatattgcacgagcccaatgc
cattcacttctcaacgcgttcagggaccatgcgcatgtttctcagtcaagacttccgact
ttagcagtggtggttcaaggtgatcccgaagccgggcctaacgctttctcaatccacgat
gctgagaatgttgttggttcggattttgaaaggctcaagagggacttaacgccaacccag
cggatcaccgcacttcaagtgttgaatgactctcgtgcaagcgcccaagctgcggtcaaa
gaagcaaaagaagtcaaggaacagcgtgacatgcggattcgggctgctattgctggatcg
ctggttgcactgaaagatataccgaagaagcctagccatattatcaaggcaatgatggac
agtgtcaaaaaagaagaaaatatagagctgcaacagcgatcggcatctgctatcgcatcg
ttagtggaatattacaccacggccgccaaacgtggtccggtagataaagtcattgcgaac
cttgttaagttttgctgcgtcgatacgtcagagacacccgaattccatcataatgcacat
ctagagaaagccatattatcgcttcgcaaagaggaagataaaaaggatccggtcgatgca
gctaaattcgagagagagtcgcgagaggctaggatcatgcgtcgtggagcaaaggaatct
ctggagcagttggcaactagatttggtgctcagttattggaaaaggtgccaaatctcgca
attcttatccaaaacgctttgaaacaggcattatccggcgacctcccaaagaatattaga
gacccatttaacgaattaggacaagaaacggtggatggcctatcgatattgcgtgccctg
tctcctaaattccatcctggactttacccatgggttaccgaacttatgcctgtcattgtg
aaggctttgcaatgcgaactctctgtcattcgatatgcggcggccaaatgttttgccaca
ttgtgtagtgttatgccggttgagggtatgaccatgcttgtggagaaagttttgccttct
atcagtaatgcattggatgtcaactgtcgacagggagccatcgagtgcatataccatttg
attcacgttatggaagataaaattcttccatatgtcattttcctgattgtccctgttctc
ggcagaatgagtgattctgataatgatgtgaggcttttggcaaccaccgcatttgctact
cttgtcaagcttgttccattggaggccggaatccctgatccaccagggctctctgaagaa
ttgctccagggtcgagaccgggagagaaagtttatggcgcaaatgcttgatgttcgcaag
gtggagccatttgagataccagttggtatcaaagctgaactccggtcatatcagcaggaa
ggtgttaattggcttgcgttccttaatcggtacaatctccatggcatcctttgcgacgac
atgggtcttggcaagactctacagacactttgtatcgttgccagcgaccatcaccttaga
gcagaggagttttctcgcacgcaggcccctgaggttcggcggctaccatccttaattatc
tgtcctcctagtgtttccggtcactggcagcaggaaattcaacaatatgcacctttcctc
acctgcgtctcctatatgggcccgccagcagaaagagcaagacatcggccgcggctcact
gaagtggacattgtgatcacttcttacgatatttgcaggaacgacaatgatatttttgca
ccaatggcgtggaactactgcgtccttgatgagggtcatctgatcaagaatccacgagca
aagattactctggcagtgaaacgcattcaaagcaatcaccgtctaatactttccggtaca
ccgattcaaaataacgttttagaattgtggtcattgttcgacttcttgatgccaggattt
ttaggaactgaaaaggttttcttggatcgctttgcaaaaccaattgcagccagtcgcttt
agcaagtcctcttccaaggagcaagaagctggggccctagctatcgaggctttgcacaaa
caagtcctaccgttcttgttgcggcgattgaaggaggaggttttgaatgacttacctccg
aagattcttcaaaattattactgtgatccaagcgaactccagcggaaattatttgaagat
ttcaccaaaaaagagcagaaggagttggcgaagaagctcggaagcacagagaaggaggcc
aaagaacatattttccaagccttgcaatatatgcgtcggctttgcaattctcctgctctt
gtcgtgaaagaaggacataggcaataccaggaagttcagagataccttgcgaataaaaat
tcgaatattcgcgatatctcgcatgctccgaaacttacggcgcttcgcgatttgcttata
gactgtggtattggcgtggatctaagtgtcgaaggagaacttaataccgctgcaagctac
gttagtccgcatcgtgcgctgatcttctgccaaatgaaagagatgcttgatattgtacaa
aatgatgtgctcaagaagctgcttccgtctattcaatacctccgtctggatggaagcgta
gaggcaactaaacgacaaaacattgtcaatcaatttaacacggatcctagctatgacgtt
ctcctccttacgaccagcgttggtggccttggtctcaaccttaccggagcggataccgtt
attttcgtggagcacgattggaatccacaaaaagatatacaagctatggaccgagctcat
cgtatcggccagaaaaaggttgttaatgtataccgcctgatcactcgaggaacactggag
gagaagattttgaatctacaacgcttcaaaatcgatgtcgcctctactgtcgtcaatcag
caaaacgctggcctaagtacaatggacacggaccagctccttgacttattcaatctaggc
gaaaccgccgagactgcagagaaacccagccaggatgctggtcttaacggcaatgaagtt
gatatggtagatatcgatggcgaagttaaggaaaagggtaaaaagggttggctagacgac
cttggggaattatgggataaccggcagtacgaagaggagtacaaccttgattccttcttg
gcgtctatgaaggggtga
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integrated database retrieval system
