Coccidioides immitis: CIMG_04434 Help Entry CIMG_04434        CDS       T01114                                  Name (RefSeq) antiviral helicase SKI2   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism cim  Coccidioides immitis Pathway cim03018   RNA degradation Brite KEGG Orthology (KO) [BR:cim00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CIMG_04434  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cim03019]     CIMG_04434 Enzymes [BR:cim01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      CIMG_04434 Messenger RNA biogenesis [BR:cim03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      CIMG_04434   mRNA degradation factors    3'-5' decay     Ski complex      CIMG_04434 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4-like_stalk MTR4_beta-barrel ResIII Helicase_C DEXQc_Suv3 Motif Other DBs NCBI-GeneID:  4565146 NCBI-ProteinID:  XP_001244993 UniProt:  J3KDH0 LinkDB All DBs AA seq 1302 aa AA seqDB search MASDLASAMQQVQINAQALDVDAELDAWIDGAGEATEGKRRKRQPQSAEELKRELEEEFL APSPRFNTQWLNRLQKRWEAPVDYADLFELAPTQTRTVIRFTREGLEGRVTRYREVTVPA GSATAKNSTSLRRRPAGRAEFVRGAAGFYPFEPGGLEAVEAISVLESEAQAEELRASAAA GKSSLDRIIKFGVEGGLLEVAPGLSRGLDFKKEKAAEAERDADDVQDALQRDDSQLDREV GEAGHEVDGGPKKEEPDEGLASDEEEDIDSLLPVEYPALEPRGELLAASAKKAGREWAHV VDVNKEITNFYDLVPDMAREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAI ALAAKHMTKAIYTSPIKALSNQKFRDFRNTFDDVGILTGDVQINPEASCLIMTTEILRSM LYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASW VGRTKKKDIYVISTPKRPVPLEHFLWAGKSMHKIVDAEKRFIESGWKQADDILSGRDKIR AQKEAEAKANQRGGFVDRGRGQSQRGAQRGAQRGGSQRGGGGQQRGGPQQRGRGQPAPRG IGNIARTGRGGGRTTAAQDRNIWVHLVLHLKKESMLPACIFVFSKKRCEENADSLSNQDF CVASEKSSIHMLIEKSLARLKVEDRRLPQIRRVRELLSRGIGVHHGGLLPIIKEIVEILF ARGLVKVLFATETFAMGLNLPTRTVVFSGFRKHDGRQFRDLLPGEYTQMAGRAGRRGLDT VGSVIIATSGRDEAPPIWALKKMILGDPTKLRSQFRLTYNMILNLLRVEALKIEEMIKRS FSENATQALLPEHQKQVQISEATLEKITREPCAICDIDLETCHRASVEFGRLTVRLHTLL LASPVGRRLFATKRVVVYRKNGVRTVGMLAKEGVSGGAAPSLQVFEFGPQSLVRHPSDIL PYLPMFRHYFVPLPRLASDMHLKTCKVPLMDLECVTSAVVKFGGPPYALNNKKEGLKIAN KELIPLASSWEKAEWDELDWGRMKELQVIEVLNERQKQLEIAQSCQCFQCPQFLKHFEMQ HDEWQVKENISQLKQLMSDQNLQLLPDYEQRLQVLKDLGFVDEACRVQLKGKVACEIHSA DELVLTELILENVLAEYEPEEIVALLSAFVFEEKTENAPTLTPRLEKGKEAIIDISNRVN DLQVKHQVILSSEDAGDFESKPRFNLVEVVYEWARGMSFNRITDLTDVMEGTIVRVITRL DETCREVKSAAKLVGDPSLYTKMQTAQEMIKRDVIFAASLYM NT seq 3909 nt NT seq  +upstreamnt  +downstreamnt atggccagcgacctcgcctccgccatgcagcaggtgcagatcaacgcccaagcccttgac gtagatgctgaactcgacgcctggatcgacggggccggcgaagccacagaaggcaagcgg cgaaagcgacaaccccaatccgcagaggaactcaaacgggagctggaggaagaattcctg gctccctcaccaagattcaacacccaatggctaaaccggctccagaagcgctgggaggct cccgtcgattatgcagatttattcgagcttgcgcccacccagacccggacagttatcaga ttcacccgcgagggcctggagggtagggttactcgctaccgtgaagtcactgtgcctgcg ggtagtgcaacggcgaagaactcgacgtcgcttcgcaggcggccagctgggcgggcggag tttgtgagaggtgctgcggggttttatccgtttgagcccggcggtttggaagcagtggag gctatttctgttctggaatctgaggcgcaggctgaagagctgcgggcaagcgcggcggcg gggaagtcttcgcttgatcgaattatcaagtttggagttgagggtgggctgttggaagtt gcgccgggtttatcgcgtgggttggatttcaaaaaagagaaagctgccgaagctgagagg gatgcggatgatgtgcaggatgcgttgcagcgagatgacagccagctggatcgcgaggtc ggagaggctggacacgaagtcgatggtggacccaaaaaagaagagccagacgaaggattg gcctccgatgaggaagaagacattgattccttgcttcctgttgaatacccagccttggag cctcggggggaacttctggctgcttcagcgaagaaagccgggagagaatgggctcatgtg gtggacgttaataaagagatcacgaatttttacgatttggtgcctgatatggctcgagaa tatccattcgagttggatacattccaaaaggaggcagtctatcaccttgagaatggtgac tccgtttttgttgcggcccatacgtctgccggaaagacggtcgttgctgaatatgccatt gcattggctgccaaacatatgaccaaggccatttacacctctccaatcaaggcgctgagc aatcagaaattccgagatttcagaaatacattcgacgatgtgggaattttaacgggagat gttcagataaaccccgaagctagctgtttgatcatgaccaccgagattttgagaagtatg ctctaccgcggtgcggacttgataagagatgtagaatttgttatctttgacgaagtccac tacgttaacgatttggaaaggggagttgtctgggaagaggttatcatcatgcttccggaa catgtcacgctgattctcttatccgctaccgtgccaaacacttacgaatttgcatcctgg gtgggtcggacgaagaagaaagatatctacgtcatttctacacccaaacgtcccgtgcct ttggagcattttctctgggccggcaaaagcatgcacaaaattgtcgacgctgaaaagaga ttcatcgaaagtggctggaaacaagccgatgacattttgtccgggcgtgataagattcgt gcacagaaggaagcagaagccaaagctaaccagagaggtgggttcgttgaccgtggacgc ggacaatctcagcgtggtgcccaacgtggtgctcaacgaggcggaagccagcgcggcggt ggcggtcagcagcgaggtggcccacagcaacgaggacgaggacagccagctccacgaggc attggcaacatcgcgcgaaccggacgagggggcgggcgcaccacagcagctcaagatcga aatatatgggtccaccttgtgctacatcttaaaaaagaaagtatgcttccagcatgtatt tttgtgttttcgaagaaacggtgtgaggaaaatgcggattcgctatctaatcaagatttt tgtgtggcctccgagaagagctcgatccacatgctcattgagaaatcgttagcccgtcta aaggtggaggacagacgactccctcagattcgaagagtgagagaattgctcagcagggga atcggcgtgcatcatggtggtcttttgcctattatcaaagaaattgtggagattctcttc gccagaggtctcgttaaggttctatttgctactgagacgttcgccatggggctgaacctg cctactaggaccgtggtcttctccggtttcaggaagcatgatggtaggcaatttcgggac cttcttcctggggagtatacccagatggccggtagagccgggcgccgtggtcttgacact gttgggtcagtgataattgccacctccgggcgagacgaggcgcctccgatttgggctttg aagaagatgattcttggtgatcctactaagcttcgttcccagttccgtctcacttataat atgatcttgaaccttctgcgtgtagaggcactgaaaattgaggagatgatcaagagaagc tttagcgagaatgccacacaggcgctcttgcctgaacatcagaagcaggtgcaaatatcc gaagctacgctggaaaagataacacgagaaccatgcgccatctgcgatattgacctggaa acatgccatagagcatcagttgagtttgggcgtttgaccgttaggctccacactctcctt ttggcgtccccggtgggcagacggctcttcgcaacgaagagggtagtggtatatagaaag aatggtgtgcgaacagtcggcatgctggcgaaagagggtgttagcggcggcgctgcaccc tcgcttcaagtcttcgaatttgggcctcaaagtctagtccgtcaccctagtgatatcctg ccgtatctccctatgttccggcattacttcgtgccgctgccaagattagcttccgacatg catctgaagacttgcaaggtcccacttatggatctagaatgtgtcacgtcggccgtggta aagtttggaggtccgccttacgctctaaataataagaaggagggattgaagatcgcaaac aaagagttaatacccttggcttcgtcgtgggaaaaggctgaatgggatgagcttgactgg ggccggatgaaggaattgcaggttatagaggttttaaacgagaggcagaaacaactggaa atcgcccagtcatgccagtgctttcaatgcccccagttcttgaagcattttgaaatgcaa catgatgagtggcaggtgaaggagaatatttcgcaattaaaacagctgatgtcagatcaa aaccttcaattgctgccagactatgagcagcggttacaggtgttaaaagaccttggcttc gttgatgaggcctgcagggtgcagctcaagggtaaagttgcatgcgagatccactcggca gacgagttagtcctcacggaactgatactcgagaacgtcctggccgagtatgaacccgaa gaaatcgttgctcttctatccgcctttgtgtttgaagaaaagaccgagaacgctccgacg ttgacgccgcgactagaaaagggtaaagaagcgattatcgatatctctaatagggtcaac gaccttcaagtcaaacatcaagtgatattgtccagcgaagacgcaggcgactttgaaagc aaaccacgcttcaaccttgtcgaagttgtctatgaatgggcacgaggaatgtctttcaac cgcatcactgatttaactgatgtgatggagggcacaatcgtgagagtgatcactcgtctc gatgaaacatgccgcgaagtgaagagcgccgcgaaactggtgggggatccttcgttatac acgaaaatgcagacagcacaggagatgatcaagagagatgtcatattcgccgcctctcta tacatgtag

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