Coccidioides immitis: CIMG_04573
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Entry
CIMG_04573 CDS
T01114
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cim
Coccidioides immitis
Pathway
cim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CIMG_04573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cim03041
]
CIMG_04573
Spliceosome [BR:
cim03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CIMG_04573
Complex C
U5 SnRNP specific factors
CIMG_04573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
Motif
Other DBs
NCBI-GeneID:
4564246
NCBI-ProteinID:
XP_001245132
UniProt:
J3KDS8
LinkDB
All DBs
AA seq
2354 aa
AA seq
DB search
MASLPPPPPPGWGAGAPPSMPLAPPPPGYRPPADPRVAKFEQKKKEWLRTQRNRFGEKRK
AGFVETQKADMPPEHLRKIVKDIGDVSQKKFSTDKRSYLGALKFMPHAVLKLLENMPMPW
ESAREVKVLYHVNGCLTLVNETPRVIEPVFHAQWATMWVCMRREKSDRRHFKRMRFPPFD
DEEPPLSWSENIEDVEPLEPIQMELDESEDGPVYEWFYDHRPLLDTPHVNGPSYKTWNLN
LPQMATLYRLSRQLLSDVVDKNYFHMFDLNSFLTAKALNVAIPGGPRFEPLYKDIDPNDE
DFGEFNAIDRIIFRAPIRTEYRVAFPYLYNSLPRSVKLSWYSHPQVVYVRTDDPNLPAFY
FDPVINPISSRSVAPKNITVSHEDQIFGPGNDEDDFELPGDIEPFLADEELYTSETASAI
SLWWAPYPFDRRSGKMVRAQDVPLVKQWYLEHCPQGQPVKVRVSYQKLLKTYVLNELHKK
KPKAQNKQNLLRALKGTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRKNLTYLHLDYNF
NLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGNIDAFQLADGILYAF
NHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNSGPVGKGPGCGFWAPAWRVWLFFLR
GIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMADLMDMMPEGIK
QNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKSKADWWISVAHYNRERIR
RGATVDKTVAKKNLGRLTRLWLKAEQERQHNYLKDGPYVSSEEAVAIYTTTVHWLESRKF
SPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALIEQAYDSPGTTLARIK
RFLLTQRAFKEVGIDMNDNYSHINPVYDIEPIEKITDAYLDQYLWYQADQRHLFPSWIKP
SDSEVPPLLVYKWAQGINNLSNVWETADGECNVMIETELSKVYEKIDLTLLNRLLRLIMD
HNLADYITSKNNVQLNYKDMNHTNSYGLIRGLQFSGFVFQYYGLVIDLLLLGLQRASELA
GPPQSPNDFLQFRDRATETRHPIRLYTRYIDKIWVFFRFTADESRDLIQRFLTEQPDPNF
ENVIGYKNKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRSITTIEWDDTFASVYSRDN
PNLLFSMCGFEVRILPKTRNQNEEFSVKDSVWSLTDNSTKERTAYAFLQVTEEDIQKFNN
RIRQILMSSGSTTFTKIANKWNTSLIALFTYYREAAVSTVNLLDTIVKCETKIQTRVKIG
LNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPASDKRWSKQTDTGVTHYRAGMSHDEE
TLIPNIFRYIIPWEAEFIDSQRVWMEYSQKRQEANQQNRRLTLEDLEDSWDRGLPRINTL
FQKDRSTLSFDKGFRTRTEFKTYQLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQALGGVE
TILEHTLFKATAFPSWEGLFWERASGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTI
NRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELE
QLGIETVQKETIHPRKSYKMNSSCADILLFATHKWNVTRPSLLFDTKDVIEATTTNKFWL
DVQLRYGDYDSHDIERYVRAKYLDYTTDSMSIYPSATGLMIGIDLAYNLYSAYGQYFPGL
KALVQQAMAKVMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSELFSNQIQLFIDD
TNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTA
EEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVHLLDFPNISIRASELQLPFQAAMKIEKL
ADMILRATEPQMVLFNLYDEWLKTISSYTAFSRLILILRALHVNIDKTKILLRPDKSVIT
QEHHIWPTLSDEDWIKLEVQLRDLILNDYGKKNNVNTQSLTSSEVRDIILGMEISAPSLQ
RQQAAEMEKQQQDQKQLTAVTTKTQNVRGEEIIVTTTSQYEQQSFASKTEWRTRAIATSN
LRTRANNIYISSEDIQEDGHFTYIMPKNILKRFIMISDLRVQVAAFLYGRSPPDNAQIKE
IITIVMIPQVGNTRDVQLPQQLPKHEYLNDLEPLGIIHTMSGNEPSYMTAMDVTQHSRLM
NAHPSWDKKTVTMTVSFTPGSVSLSAWSLTPQGYKWGAENKDTSSDQPQGFSTSFGEKCQ
LLLSDRIRGYFLVPENNVWNYSFMGSSFSSVEKRPVYVKVDTPLRFYDDQHRPLHFQNFA
ELEDIWVDRTDNFA
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactgcctcctcccccgcccccaggatggggtgccggagctcccccttccatg
ccacttgctcctccgccccccggataccgaccaccagccgacccaagagtcgccaagttc
gagcagaagaagaaggagtggcttcgaacacagcggaatcggttcggggagaagcgaaag
gcaggatttgtggaaacccagaaggccgatatgccgccggagcatttgcgaaagatcgtg
aaggatatcggagatgtgtcccagaaaaagttcagcactgataaaagaagctaccttgga
gcgttgaagtttatgccgcatgctgtattgaagctattggagaatatgccgatgccatgg
gagtctgctagagaggtcaaagtgctctatcatgtgaatggctgcttgacccttgtcaac
gaaactcctcgagtgattgagccggtcttccatgcgcaatgggcgactatgtgggtctgt
atgcgacgggagaagagcgaccgaagacatttcaagagaatgcgatttccgccgtttgat
gacgaggaacctcccttatcatggtcggagaacattgaagatgtggagcccctagagccc
attcagatggagctagatgaaagtgaagatggcccggtatatgaatggttctatgaccat
aggcctcttcttgatacacctcatgtgaatggacctagctacaaaacgtggaacctgaat
ctcccccaaatggcgaccttatatcgactcagtcggcagcttctgagcgatgtggtggat
aagaactatttccacatgttcgatttgaatagtttcctaacagcaaaggccctcaacgtt
gctattccgggtggcccaaggttcgagccgttatacaaggatatagaccctaacgacgaa
gatttcggtgaatttaacgctattgatcgcatcatcttccgagcgccaattagaactgaa
tacagggtcgcttttccctatttgtacaactcattaccgagaagcgtgaagctgtcgtgg
tactctcatcctcaagttgtatatgttcgaaccgacgatccgaatcttccagcgttttac
ttcgaccccgttattaatcctatttcttctcgatcggtcgctccaaagaacatcaccgtt
agccacgaagatcaaatcttcggtccgggaaacgatgaagatgatttcgagctccctggt
gatattgagcctttcttagctgacgaagagctatatacaagcgaaacagcgtcagctatt
agtctgtggtgggctccatatccgtttgatagacgttcgggtaaaatggtacgagcacaa
gatgtgcctctggtgaagcagtggtatcttgaacattgtccccaaggtcagcccgtaaag
gttcgggtgtcttaccaaaagttactcaagacatatgttctcaatgagctgcataagaaa
aagccgaaagctcagaacaaacaaaatctattgagagccttaaagggaacgaagtttttc
cagcagaccaccattgattgggtggaagctggtcttcaagtttgccgtcaaggttttaat
atgctaaatttgctaatccaccggaagaacctgacatacctgcatttggattacaatttt
aacctcaagcccgtcaaaaccttgacaactaaagaacgtaaaaagtctcgctttggaaac
gcgttccacttaatgagagaaatcctccgacttaccaagctgatcgtcgacgcccaagtt
cagtatcgccttggtaatattgatgctttccagcttgcagatggaatactctatgcgttc
aaccatgtcggccagcttaccggaatgtacagatataagtacaaactcatgcaccagatc
cgatcctgcaaagatctgaagcatctaatttattaccgtttcaactccggccctgtagga
aagggccctggctgtggcttctgggcgcctgcatggagagtgtggcttttcttcctccgt
ggaataatccctcttctggaacgatggcttggaaatttgttgtctagacagtttgaaggc
cgacatagtaagggagtggcaaagaccgttaccaaacagcgagttgagtctcatttcgac
ttggagcttcgagcgtctgtgatggcggatctaatggacatgatgccagagggaatcaag
cagaacaaagtcaatacagtccttcagcacctttcagaagcgtggagatgctggaagagc
aacattccgtggaaagtacccggtcttccagctccaatcgagaacattattttgcgatac
gttaagagcaaggcggattggtggatatcggtcgctcattacaaccgtgagcgaattcgg
cgcggagcaaccgttgataaaacagtggctaagaaaaaccttggtcgtttaactcgtcta
tggttgaaagctgagcaagagcgacagcataactacctgaaagacggcccgtatgtatct
tctgaggaagctgttgctatctacactaccaccgttcattggcttgaatcccgcaaattt
tcaccgatcccgttccctagtgtatcctacaagcacgacacaaagattttgattttggcc
ttggaacgtttacgtgaggcatattcggtcaaaggccgtttgaatcaaagccagcgagaa
gaacttgctttgatcgaacaagcctacgattccccaggcacaactcttgcgagaatcaag
cgattccttcttactcagcgagcgtttaaagaggttggtatcgatatgaacgacaactat
agtcatatcaacccagtttatgacatcgagcctatcgagaagatcaccgatgcatatttg
gaccagtatctatggtatcaagctgatcaacgccaccttttcccgtcctggattaaacct
tctgattccgaagtgccgccgcttctcgtttataaatgggcccaaggcatcaacaacctt
tcaaatgtgtgggagaccgctgacggcgaatgcaacgtcatgattgagacggagctttcg
aaagtgtatgaaaagattgatcttacacttctcaaccgcttactccgtctcattatggac
cataacttggcagattatatcacgtctaaaaacaacgttcagctcaactacaaggatatg
aaccacactaacagctatggtctaatccgcggtctccagttctccggcttcgtcttccaa
tactatggcttggtgatcgatctactcctgctcgggctgcagcgagccagtgagctagcc
ggtccaccccagagccctaacgacttcctacagttcagggatcgagcaacagaaaccaga
catccgatccgtctctacacgagatacattgacaaaatctgggtattttttagattcacc
gccgacgagtctcgtgatctgatccaacggtttttgaccgaacagcccgacccgaacttt
gaaaatgttatcggttataagaataaaaagtgctggccgagagattctaggatgagactg
atgaggcatgatgtcaaccttggtcgtgccgtgttctgggatttgaagaatcgtcttcca
aggtctataactacaattgaatgggatgacacgtttgcgagtgtctacagtcgggacaac
cctaatcttctcttctccatgtgcggattcgaagtgcgtatccttccaaagactcgaaac
cagaatgaggaattttcggtaaaagacagcgtctggtccctcacagataattccacgaaa
gagcgaactgcgtatgcattccttcaggtcacggaagaagatatccagaaattcaataat
cgcattcgacagattcttatgtcctctgggtcgactacgttcaccaaaattgcgaacaaa
tggaataccagcttgattgcgctcttcacatactaccgtgaagctgcagtctcgactgtt
aacctcctagataccattgtgaagtgcgagaccaaaattcaaactcgagtgaagatcggc
cttaactccaagatgccttctcgttttcctcctgcggtgttctatacacctaaggaatta
ggagggctaggcatgatatccgggtcgcacatccttatccctgcgagtgacaaacggtgg
tccaaacagaccgacactggagtcactcactacagagcgggaatgtcacatgacgaagag
acgcttattcctaacatcttccgttacatcattccgtgggaagccgagtttattgattca
caacgtgtctggatggagtattcacagaaacgacaagaggccaaccagcagaatcgacga
ctgactctcgaggatctggaagacagctgggatcgtggtcttccacgtattaacactttg
ttccaaaaggatcgcagtacgctcagttttgacaaaggtttccgtactcgtacggagttc
aagacctatcagttgatgaagagcaatcctttctggtggaccagtcaaaggcatgacggc
aaactgtggaatctcaacgcctaccgtaccgacgtcatccaagccttgggaggcgtcgaa
acaatcttggagcacacgcttttcaaggcaaccgcgttcccttcctgggagggtctcttt
tgggagagagcgtctggcttcgaagagtcgatgaaattcaaaaagctcacaaacgcccaa
agatccggtttgaaccagattcccaatcgtcgcttcactctttggtggtctcctaccatc
aatcgtgccaatgtttacgttggtttccaagtgcagctggatcttactggtatcttcttg
catggcaagatcccaactttgaagatctccctgatccagatcttccgagcacatttgtgg
cagaaaatccacgagtcggttgtcatggatctttgccaggtattcgaccaggaactcgag
caacttggcattgaaacggttcaaaaggaaactattcacccgcgtaaatcctacaagatg
aacagttcttgtgccgatatccttttattcgctacacataaatggaacgtcacacgccct
tcacttttattcgatacaaaggatgtgatcgaggccacaacgacaaacaaattctggttg
gatgtacaattgagatatggcgattacgattctcacgatatcgaaagatatgtccgtgct
aagtatcttgattataccacggatagcatgagcatctatccctcggcaactggactgatg
atcggtatcgacctggcatataacctgtattctgcgtatggccagtacttccctggtttg
aaagctctcgtccaacaagccatggccaaagttatgaaggcaaatccagctttgtacgtc
ctaagagaacgtatccgcaagggtctgcagctttatgcgtcggagagcaaccaagagttt
ctaaactctcaaaattattctgaactcttcagtaaccaaatccagctattcatcgacgat
accaatgtctatcgcgtcactatccacaaaacctttgaaggcaacttgacgacaaagcct
atcaacggtgccattttcatcttcaacccgcggactggccagctctttttgaaaattatt
cacacaagcgtttgggccggacaaaaacgtctgggtcagttggctaaatggaaaaccgca
gaagaagtggcggcgcttatccgatctctaccagttgaagaacagcccaagcagttgatt
gttacaagaaagggtcttcttgatcctcttgaagtgcatcttcttgacttcccaaacatt
tcaattcgagcttccgagttacaactgccattccaggccgccatgaagattgaaaaactc
gcagatatgattcttcgggcaacggagccacagatggtactgttcaacttgtatgacgaa
tggctaaagacaatctcgtcgtacactgccttctcccggttgattttaatcctccgagca
ctgcatgtcaacattgacaagaccaagattctcttgcgtccagataagagtgtaattacc
caagagcaccatatctggcctaccctttcggatgaggattggatcaaactcgaagttcag
ctccgtgatttaatcttgaacgactacggcaagaagaacaatgttaacacccagagtttg
accagcagcgaagttcgggatattattcttggtatggagattagtgcaccgtcattacag
cgtcagcaggccgccgaaatggagaagcagcaacaggatcaaaagcagctcaccgccgtg
actaccaagacacaaaacgtacgcggggaagagattattgttacgaccacgtctcaatac
gagcagcagtccttcgcctcgaagacagagtggcgtacacgtgccattgcgacatcgaat
cttcggacacgggctaacaatatctatatctcgtccgaggacattcaagaggatggacat
ttcacgtatatcatgccaaaaaatatcctcaaacgattcattatgatctcggacctccgg
gttcaggtggctgcgttcttatacggtcgctcacctcccgataacgcacagatcaaggaa
ataataaccatcgtcatgataccacaagttgggaacactcgagacgttcagctgccccag
caactgccaaaacacgaatatctcaacgaccttgagccgcttggaattatccacaccatg
tcgggcaacgagccatcgtatatgaccgctatggacgttacgcaacactcccgtctaatg
aatgcgcatccatcatgggataagaagactgtgactatgacagtatcttttactccgggc
tccgtttccttgtctgcatggtcgttgactcctcaaggctataaatggggcgctgagaac
aaggatacgagctcagaccaaccgcagggattctcgaccagctttggtgagaagtgtcag
ctactgctcagcgatcgtattcgtggctatttcttggttcctgagaacaatgtgtggaat
tacagcttcatgggcagctcgttcagcagcgtggagaagagacctgtgtacgtcaaggtt
gacactccattgcgattctacgatgatcagcacaggcctttacatttccagaactttgcc
gagctagaggatatctgggtagatcggactgataacttcgcgtga
DBGET
integrated database retrieval system
