KEGG   Coccidioides immitis: CIMG_04674
Entry
CIMG_04674        CDS       T01114                                 
Name
(RefSeq) U2 snRNP auxilliary factor, large subunit, splicing factor
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cim  Coccidioides immitis
Pathway
cim03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CIMG_04674
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cim03041]
    CIMG_04674
Spliceosome [BR:cim03041]
 Complex A
  U2 snRNP components
   U2 related factors
    CIMG_04674
 Complex B
    CIMG_04674
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 4564955
NCBI-ProteinID: XP_001245233
UniProt: A0A0E1RXC1
LinkDB
AA seq 545 aa
MNGEAYSSRDTGRSRDYYGSRSERDDRRDRGDRGDRRDRDRRRSRSPHHSSRSSRRDHEL
DSYSSSRDYRAREREDRYSRRDDRDWDRDRGDRRRDRREDDERPSRRERELFDDRPRRDR
GGRDRRRSQSPAQRKKEPTPDLTDVVPILERKRRLTQWDIKPPGYENVTAEQAKLSGMFP
LPGAPRQQAVDPSRLQAFMNQPGGNASNTLLKPSNSRQAKRLFVYNLSPSLSEDSIAQFF
NLQLNGLNVVSGVDPCVSAQLSTDGTFALLEFKTAADATVALAFDGVSMEPDDANGHTNG
SSQGLSIRRPKDYIVPSETDDSNRQEGVVSNEVPDSPNKICVTNIPPFIQEEQVTMLLVS
FGELKSFVLVKDSGTDESRGIAFCEYVDPSSTNIAVEGLNGMELGDKRLKVTRASIGATQ
AAGLDMGVNAMSMFAKTTSQDLETGRVLQLLNMVTAEELMDNDDYEEICDDVRDECSKYG
QILEMKVPRPTGGSRQSAGVGKIYVKFDNYESAYKAMKALAGRKFQDRTVVTTFFSEENF
DVGAW
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgaacggcgaggcctacagctcgagagataccggacggtcgagagactactacggctct
cgttccgagcgagatgatcgaagggatcgcggcgaccgtggagatagacgcgatagagac
cggagacgatctaggtctccacaccacagttcccgttcctcgcgtcgcgatcatgagtta
gattcgtattccagcagtcgcgattatcgcgcacgggagcgagaggatcgatatagccga
cgtgatgaccgagactgggatcgagataggggcgatagaagacgtgatagacgcgaagac
gatgagagaccttcgcgacgggaacgcgagctttttgatgaccggcctcgtagggaccgt
ggaggcagagacaggcgaagaagccagagccctgcacaacgaaagaaggaacctactccg
gatctgacggacgttgtgccgattctggaacggaaacggcggctgactcaatgggatata
aaacctccaggttacgaaaatgttaccgccgagcaggcgaaactctcaggcatgttcccc
cttccaggcgcaccacgtcagcaggcagtcgatcccagtcgtttgcaagcgtttatgaat
cagccagggggaaatgcaagcaatacgctcctcaagccctcaaattctcgacaggccaaa
cggctctttgtttacaatttatctccatctctttctgaagattctattgcacaatttttt
aacctacagttgaatggtctaaacgttgtcagcggtgttgatccatgtgtgtcggcacag
ctgtcaactgatgggacattcgcccttctggagttcaaaaccgcggccgatgccaccgtt
gcattggctttcgacggtgtctcaatggaacccgatgatgccaatggccacacaaacgga
tcgagccaaggtctttctattcggaggccgaaagattatatcgtaccatccgaaacggac
gattcgaaccgtcaagagggcgtcgtttcaaatgaagtccccgactctcccaataagata
tgcgttacgaacattcctccattcattcaagaagaacaggtaacaatgcttctggtatca
ttcggcgagctgaagtcctttgtactggtcaaggacagcggaaccgatgaatctaggggc
attgccttctgcgaatacgtcgacccctcatccaccaacattgcagtcgagggtttgaac
ggcatggaactcggtgataaacggctgaaggtaacccgagctagcattggggctacccag
gccgctggtcttgatatgggtgtaaatgctatgtcaatgtttgccaaaacgacatctcaa
gatcttgaaactggtcgagttttgcagttgctcaatatggttacggctgaggaactgatg
gacaacgatgactacgaagaaatctgcgacgacgttcgcgacgaatgttcaaaatatgga
caaatccttgagatgaaggttccacggcctactggtggcagtcggcagtcagccggtgtt
ggaaaaatctacgtaaaattcgacaattacgagtctgcctataaagcaatgaaggcgttg
gcgggacgtaagttccaggaccggacagtcgtgactacatttttttcagaggaaaatttc
gatgtcggtgcttggtga

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