Coccidioides immitis: CIMG_04751
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Entry
CIMG_04751 CDS
T01114
Name
(RefSeq) mRNA 3'-end-processing protein yth1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cim
Coccidioides immitis
Pathway
cim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CIMG_04751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cim03021
]
CIMG_04751
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_04751
Transcription machinery [BR:
cim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CIMG_04751
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CIMG_04751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_9
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
4564825
NCBI-ProteinID:
XP_001245310
UniProt:
J3KE56
LinkDB
All DBs
AA seq
251 aa
AA seq
DB search
MAEVHRVADRIVSADSPRDPNFTNFAFSPFLRKTFGFGLASDVPVCKAYREGHCPLGPMC
PDRHPTPSRISTATSPAIAPSSTHGSLVCKHYLKGLCKKGIKCEYLHEYNLRRMPECQSF
ARSGYCANGDDCLYQHVSEEAKLPPCEHYDKGFCPLGPLCAKKHVRRKICPFYLAGFCPE
GRACTTGAHPRWPENLPKPTVKVEKTAEEIEREKARIREEQEKEEEREREWRRERGRGGR
FMGGRFRGKRL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggttcatcgtgttgcagaccggatcgtatccgccgacagtcctcgcgaccca
aacttcaccaacttcgccttcagcccgttccttcgcaagacgttcggttttgggctcgcc
tcggatgttcccgtctgcaaggcttatcgagaaggccactgcccactcgggcctatgtgc
ccagaccgccatccaaccccctcccgaatctctacggctacttcgcccgcgattgctcca
tcgtctacacacggcagccttgtatgcaagcattacttgaaggggctatgcaagaaggga
ataaaatgcgaatatctacatgaatataatttgcgccgcatgccggaatgccagtctttt
gcgcgaagcgggtattgcgccaacggcgacgattgtctatatcagcacgtttccgaagaa
gccaaattaccaccttgtgaacattacgataagggattctgtccgttagggcctttatgt
gcaaagaagcatgttcgcaggaagatatgtcctttctacttggcaggattttgtcctgag
ggaagagcttgcacgacgggtgctcatccaagatggccggagaatttgccgaaacccacg
gtgaaagtggaaaaaactgcggaggaaatcgagagagagaaggctagaatcagagaggaa
caggagaaagaggaggagagggaaagagaatggaggagagaacgaggtcgcggcgggcgg
tttatgggtggaagatttcgcgggaagaggctatag
DBGET
integrated database retrieval system
