KEGG   Coccidioides immitis: CIMG_05431
Entry
CIMG_05431        CDS       T01114                                 
Name
(RefSeq) small nuclear ribonucleoprotein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cim  Coccidioides immitis
Pathway
cim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIMG_05431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cim03019]
    CIMG_05431
Messenger RNA biogenesis [BR:cim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CIMG_05431
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CIMG_05431
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 4564262
NCBI-ProteinID: XP_001245990
UniProt: A0A0E1RZC2
LinkDB
AA seq 209 aa
MEHFSPQDTKNVAGRAGGGPSPGPPSQYPQSGRFQQPSPPVGPPHSQQHQMPPGNTPPQQ
QGGAPVLPSGPPQLPPQLFTTAAQLLDLTDKKLVLILRDGRKLIGVLRSWDQFANLVLQD
TVERVYSGNLYGEEPRGVYLVRGENVLLLGEIDLDKEDDIPEPYRQAPYKEVLEMKQRED
SERKRTDKRRGGKLQTLGFEAEHSGEVLF
NT seq 630 nt   +upstreamnt  +downstreamnt
atggagcacttctcccctcaggacacgaagaacgtcgccggacgagccggaggtggtcct
tcgcctggcccaccttcccaatatccccaaagtggccgatttcaacagcccagtcctcca
gtcggacccccccactcccagcaacatcaaatgccaccaggaaacacaccaccgcagcaa
cagggcggagcgccagtgctaccgtccgggccgccgcaattacctccgcaactgttcaca
actgctgcgcaacttttagatttaaccgacaagaaacttgttctgatccttcgtgacggt
cgcaaattaatcggagtgctacgaagctgggaccaattcgcgaacttggtccttcaagat
acggtcgaacgagtttattccggaaatctctacggagaagaaccgcgtggcgtatattta
gtacgaggagaaaatgtccttctccttggagagatcgatctcgacaaggaagacgatata
cctgaaccttaccgtcaagcgccgtacaaggaagttcttgagatgaagcaacgagaggat
tccgagcgaaaaaggacagacaaacgccgcggcgggaagctacaaacccttgggttcgag
gctgaacacagtggtgaagtcttattctga

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