Coccidioides immitis: CIMG_05431
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Entry
CIMG_05431 CDS
T01114
Name
(RefSeq) small nuclear ribonucleoprotein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cim
Coccidioides immitis
Pathway
cim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIMG_05431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_05431
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CIMG_05431
mRNA degradation factors
5'-3' decay
Lsm complex
CIMG_05431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
4564262
NCBI-ProteinID:
XP_001245990
UniProt:
A0A0E1RZC2
LinkDB
All DBs
AA seq
209 aa
AA seq
DB search
MEHFSPQDTKNVAGRAGGGPSPGPPSQYPQSGRFQQPSPPVGPPHSQQHQMPPGNTPPQQ
QGGAPVLPSGPPQLPPQLFTTAAQLLDLTDKKLVLILRDGRKLIGVLRSWDQFANLVLQD
TVERVYSGNLYGEEPRGVYLVRGENVLLLGEIDLDKEDDIPEPYRQAPYKEVLEMKQRED
SERKRTDKRRGGKLQTLGFEAEHSGEVLF
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggagcacttctcccctcaggacacgaagaacgtcgccggacgagccggaggtggtcct
tcgcctggcccaccttcccaatatccccaaagtggccgatttcaacagcccagtcctcca
gtcggacccccccactcccagcaacatcaaatgccaccaggaaacacaccaccgcagcaa
cagggcggagcgccagtgctaccgtccgggccgccgcaattacctccgcaactgttcaca
actgctgcgcaacttttagatttaaccgacaagaaacttgttctgatccttcgtgacggt
cgcaaattaatcggagtgctacgaagctgggaccaattcgcgaacttggtccttcaagat
acggtcgaacgagtttattccggaaatctctacggagaagaaccgcgtggcgtatattta
gtacgaggagaaaatgtccttctccttggagagatcgatctcgacaaggaagacgatata
cctgaaccttaccgtcaagcgccgtacaaggaagttcttgagatgaagcaacgagaggat
tccgagcgaaaaaggacagacaaacgccgcggcgggaagctacaaacccttgggttcgag
gctgaacacagtggtgaagtcttattctga
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