Coccidioides immitis: CIMG_05611
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Entry
CIMG_05611 CDS
T01114
Name
(RefSeq) pre-mRNA splicing factor
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
cim
Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cim03041
]
CIMG_05611
03036 Chromosome and associated proteins [BR:
cim03036
]
CIMG_05611
Spliceosome [BR:
cim03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CIMG_05611
Chromosome and associated proteins [BR:
cim03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
CIMG_05611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_PARP14_3
Nup35_RRM_2
HAT_Syf1_CNRKL1_N
Lsm_interact
RRM_Nup35
RBD_DEAH11
DUF7551
HAT_PRP39_C
Suf
Motif
Other DBs
NCBI-GeneID:
4563345
NCBI-ProteinID:
XP_001246170
UniProt:
J3KFY8
LinkDB
All DBs
AA seq
1296 aa
AA seq
DB search
MDINSLLSHDSTPSSQARNPSANSPRRRPSHNLRSNPARQNMTSSPLVHQVLTPSNLREP
SPPAISPVIGPVRSSGGTPPSSDLPPPRQASTPGMDTLADLASMQQHQPQRSNAPRLRNA
ESYESQLSPSTMYPNVPPVAHTTPTPRPFESNAADGSGDTPRRDYSNTCLAPDARKQATD
LCAEVQRNPHAYDARVKFIKLLHQGFVDHVYPPSSPGSRGDPHKYDVLKDLRAAREELDN
LFAIGEDLWVEWIQDESLLARTVEERISVMELCQRSVEEEFGSTRLWIIYGDWMLYLYNS
ASNSGEPAASQAQWSEEDKVVGREVFGWQSVMDVWRKGAEATRWRISDSHLVWNRYLELT
MRDLASSPTSEKASQVRALFESRLQTPHMAWDQTFQIFSNFVSTYYNANYEDIMVSTNAK
AGEIKAICDARETSELALQRAVESNDTTAEWTAYTQYLELETTHKYKKPLYGFQLITALF
QRALLRFPTDANLWDDYVIYIVNESMHRRTNEPVIPILERAARHCPWSGSLWSQLLLSAE
RAGYSFQDISDLKHRATRTGLLEAAGVDEVLKVHTTWCSYLRRLPFQSNSTDEDLDVAEV
GMRSAIESVQAIGDKGDKTVPNDPLFRLERIYIRYLSESGSWDSARETFKGLVGRHGHTY
EFWLMFYTWELLCWSKFTQGDGPRKAPSPHYATAVLKQALQRDDLDWPEKIMDTYIAHCE
QYEDAEELQLAIVEIRRVSKRVAKRREKEALEAAAQQQAAVAQAVQAAQNNAEDTVHVGK
RKRESADVNGLASKKPKAEVSEAKPAEPEAEHAPKRDRENSSVSVKNLPRDVPTLKIRQF
FRDCGKINAVTLLPADGDSASAIVEFDSKDDAEVAQTRDQKVLEGRVLSVQLETKATLFV
TNFPPEADESYIRRIFSPHGEIVEVRFPSLKFNTHRRFCYVQFASAADAHDALELDHKSV
GKNLNLVVKISDPSKRQARSGAFEEGREIHISNLDWKATEDDLIELFTAFGKVEVARIPT
KADGGSKGFGFVAFSTPEAANAALAMDQKEFRSRPLRVRLSTHTGAKRQSTTIISRVGRS
KSPSMEPNGGASPSTASVNQADLPVGERNLRTLGLMNIPDTVNDARIRTLVEPYGPLVKI
ILRPDHQGAIVEFMDVGDAGKAALGLDGQEIAPGRQIRVGPVSEMLKQPPEHKVDRLQVG
KQKQKQKPALMVQPAAPISRPGQQGRAGRRGGLGVKKGAFNGKIGPASIATKAEAQQSSA
DRISSHDHILSEAPKPKSNDDFRVMLSQPKTKSEEI
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggatataaattcgctcttgtcccacgactcgacgccctcgagtcaggctcgtaatccg
tcggccaactcgcctcgcagaaggccgtctcacaatcttcgctccaacccagcgaggcag
aacatgacctcttctcccctcgttcaccaggttcttacgccttcgaatctgcgcgaaccg
tccccgcctgccatcagtcctgtaattgggcctgtgcgatccagcggcgggactccacct
tcctccgatttgcctccgcccagacaggcgtcgactccgggaatggataccctcgctgat
ctcgcctcgatgcagcagcatcagccacagcggtctaacgccccgagactgaggaatgcc
gaatcctacgaaagccagctctctccgtcgacgatgtacccaaacgtacctccggttgcc
cacaccactccgacgcctcgcccctttgaaagcaatgcggccgatgggtccggtgataca
ccgaggagagattattccaacacctgcctcgccccggatgcccgtaagcaagcgaccgat
ctttgcgccgaggtccagcgcaatccccatgcctacgacgcccgcgtcaagttcatcaag
ctgctccaccagggctttgttgaccacgtctaccctccgtcgtcgcctggctctcgtgga
gatccccacaagtacgatgtcctcaaggacctccgcgcagcccgtgaggaattggacaac
ctattcgcgatcggcgaggacctctgggtggaatggatacaggacgagagcctgcttgct
cgcacagtagaggaacgcatctctgtgatggaactgtgtcagagatccgtcgaagaggaa
tttggaagtactagactctggattatctatggggactggatgttatatctctacaattcc
gcttccaattctggagagccggcggcttctcaggcgcaatggtcagaggaggataaggtc
gtgggtcgtgaggtgtttggctggcagtcggttatggatgtgtggaggaaaggcgccgag
gccacgagatggcgtattagcgacagccacctcgtctggaatcgatatctcgagcttacc
atgcgagatcttgccagctcacccacctccgaaaaggcatcccaagtccgagccttgttc
gagagcagactgcagactcctcacatggcctgggaccagacgtttcaaatattttccaat
tttgtttcaacttactacaatgccaactatgaggatatcatggtcagtactaatgcgaaa
gcgggggaaataaaagccatttgtgatgccagagagacaagcgaattggccctgcagcgt
gccgtcgagtcgaatgacactacggctgaatggaccgcatacacccagtatctcgagttg
gaaactacgcacaagtacaagaagcctttgtacggctttcagttgataacggcgttgttc
cagcgtgctctgctgcgattcccgactgatgcgaacctctgggatgactacgtcatatac
atcgtcaatgagtcgatgcatcgccgcaccaatgagcccgtcattcctatcctagagcgt
gctgcaaggcactgtccctggtccggttctctctggtctcaactcttattatccgcggag
cgagccggctattccttccaggacatatccgatttgaaacatagggccacccgtaccgga
ttgctcgaggctgcaggtgtcgatgaggtgttgaaagttcacaccacctggtgcagctac
ctccggcggctgccgtttcagtccaattctacggatgaggatttagacgtggcagaagtg
gggatgcggtccgcgatcgagagtgtccaagctataggcgacaaaggcgacaagacggtc
ccgaacgatcctctcttccgcctcgaacggatatatatccgttatctgagcgaaagcggt
agctgggatagtgccagagaaacattcaagggcctggttgggcgtcatggtcatacctac
gagttttggctcatgttttatacgtgggagctcttgtgctggagtaaatttacacaaggc
gacggtccccggaaagcccccagtcctcactacgcgacggcggtgctgaagcaggcgctg
caaagagatgacttggactggcccgaaaagataatggatacgtatatcgcgcattgcgag
cagtacgaagatgctgaggagcttcagctggccatcgtcgagatccgaagggtctccaaa
agggttgcgaagcgacgagaaaaagaagctttggaggcagcggctcagcagcaagcagcg
gttgctcaggcagtgcaggcagctcagaataacgctgaagacacggtgcatgttggaaag
cgaaaacgtgaatccgcagacgtcaacggcttggctagcaaaaaaccaaaggccgaggtt
agcgaagccaaacctgcggaaccagaggcggagcatgctcccaaacgcgaccgggaaaat
tcgagtgtttcggtcaaaaacctgcctagggatgtcccaaccctcaaaatccggcagttt
ttccgtgattgtgggaaaatcaacgccgtcacactcctcccggcggatggtgattctgcc
tctgcgatcgtcgagttcgactcgaaagatgatgcggaagttgctcagacgcgggatcaa
aaggttttggaagggcgtgtgcttagcgtccaattggaaaccaaagcaacactttttgtt
acaaacttcccacccgaagccgacgagtcctacattcgacggatattcagcccacatggt
gagattgttgaggtgcgattcccgtctctcaagtttaatacccacaggcggttctgttat
gtgcagtttgcttctgcagccgatgcgcatgatgcactcgagttagatcataagtccgtg
gggaaaaatttgaacctcgtggtgaagatatccgacccctcgaaacgccaagctcgttct
ggtgcgttcgaggaaggccgggaaatccatatctcaaaccttgattggaaggctactgaa
gacgacctaattgagctctttacggcttttggcaaagtcgaagttgcgcgcatcccaacg
aaggccgacggtggcagtaaggggtttgggtttgtagcattttccacaccggaagctgca
aatgcggctttggcgatggaccagaaagagtttcgctcccgaccgctccgtgtcagactg
tctacgcacaccggcgcaaaacgccaatctactaccataatttcgcgcgttgggcggtcc
aagtctccatccatggaaccaaatggaggggcttcgccatccaccgcttcggtcaatcaa
gccgacttgccagttggtgaaaggaaccttcgcactctcggtctaatgaatattcccgac
accgtcaacgatgcccgtattcgtactctagtcgagccgtatggacctcttgtgaagata
attcttcgccctgaccatcaaggtgctattgtcgagttcatggacgtgggtgatgctgga
aaggcggcccttgggctcgacggccaggagattgcaccgggtcgtcagattcgcgttggg
ccagtatcagaaatgctgaagcagccgcccgagcataaagtggatcgtcttcaagttgga
aagcaaaagcaaaagcaaaagccggcgctcatggtccagcctgccgcacccatttcgaga
cctggtcaacagggtcgtgcgggaagaagaggcggattaggtgtaaagaaaggcgccttc
aacgggaaaattgggcccgcttcaattgccacgaaagcagaagcacagcagtcttctgca
gatcgaatttcctcccatgatcacatattatccgaggccccgaagccaaagagcaatgac
gatttccgagtcatgttaagtcaacccaagactaagtcagaggagatatga
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