Coccidioides immitis: CIMG_05797 Help Entry CIMG_05797        CDS       T01114                                  Name (RefSeq) tRNA-splicing endonuclease   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism cim  Coccidioides immitis Brite KEGG Orthology (KO) [BR:cim00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cim03021]     CIMG_05797 Enzymes [BR:cim01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      CIMG_05797     5.6.2.5  RNA 5'-3' helicase      CIMG_05797 Transcription machinery [BR:cim03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      CIMG_05797 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel UvrD-helicase AAA_19 Viral_helicase1 AAA_30 zf-CCHC DEAD AAA_22 Med9 nSTAND3 Motif Other DBs NCBI-GeneID:  4561782 NCBI-ProteinID:  XP_001241901 UniProt:  J3K6T2 LinkDB All DBs AA seq 2141 aa AA seqDB search MAELLGTLGELKALSNELHLLCPRQNDDDRSQYKEKHVDREKCKRNDEDACKRLAEIRKA REEARIRREKFLSCMPLLAFHEAELIEHQTWIWNRLQQSLESCELCIIEYYKGKSWLWET LKEHYEESEVAQFGKMLDDWDIGRILNHLDSAAQTLSSLDPSQRCPEILDRSGLCAIFEA LNCQALMKQEDKFRQHFDEPFKLVQTHQRLRIMEYVPGLSRFIFDPDPLRSKWAELAWEK VPEPLTKEDFEQAVKEPLMPALSQATYQPYQPDIVERLWRGLYLIVQRCDEGIITHNLRG LEIDICRLSVEHLEIQGPCLRPLLNTIRVLVEKAPRVFWDAMQTIPPQAILERIFHNPQL DKLFREMVEEEPFEMSALRGVLLFLHSFVRSLLDAHRPQTCRYLTYQLLTRIQESEFPEV VKFYCINAGLSVIIMLLRSFTEDSTSRGSVATVVLSETLEIVTKHINIIFNPPKFVINGK PMDLVPLCTDVVRNVLSFECESLKADYGMILENKNLQQNVSTYTPVIWDEVVRHLHEGNI ALSRSALIGLYPLPGLEKFPTRGENNPEKTHYNTMYGHITHCFCLILERLADFKPEKLDE LFQDPSAPLAPISALFSADLNTYQAAIDLIKTVSGQSGRREAISHLFQAFWTSTLYAFSW SYRRIAKMKTFASAPRMVKTGTDIIDVLCDSQTGILRSRKLADDAETASLQKLWEYQWVG LTTIFNQTEAWHRTGVDRTTMMEFCRDTMQFADLLFDQFPIFVTAIVESNSSISKSASEI LLKAPTKTMSGMVKWLRLKDEYLATTLGGLVVKLLRRLGELNVELPEDAINFIRGVAVTS EVKTILTQREKAELVRALEAYYGEPLAPTQATLPIIKKQTTIRDFAKPVDRSAVSTPKES TEEEFSEDIPDETLMQLSSSVELNKARLAATSKKTEKRISVAPKPLLKPSPLTQSVQSFR EKREREREEKKRRDKLEADRRKKNSAFLGVAEQTMSQGSGLDSISVDITEPKPVDSMMVS QTSSESESDDEDQGTLGQKTPMKPDAVRAYEESKKMRLQQRMPVKKIKVARSAKDMRARL SPDLTTLHKTILSWDFFATGDLPPNCGRTDYTLVSNTFTNALEYQRTFEPLLILEAWQGF QSAKEDGTFKPFEITVANRVSVDNFVEVSTSMAPQTVKDLGLGEADMILISKGSNPTTDS KAHHCLARVSGLIKKKGQMEITYRVNPMNPLINTISPGASLYGVRISSLTPLEREYGALM ALKYYDLSDEIIRAKPSPILNYSTESVKHILGTYDLNLAQAKAVKSAMDNDAFTLIQGPP GSGKTKTIVALVGALLTPTLSEHRIAPPRPGDKTARTLAKKLLVCAPSNAAVDELVMRFK EGVKTLQGRAQKISVLRLGRSDAINTNVLDVTLDERVNAKLSEIGQKNGSERDLQSLYTE HKDTSNKFNEIRERMDQCRAKAQALPAELEREFDLLKKKKAQLSQAIDSARDKNQAAARN AELTRRKIQQEIIDEAHVICATLSGSGHEMFQTLSIEFETVIIDEAAQSIELSALIPLKY GCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPQDVHLLDTQYRMHPEISRF PSAAFYDGRLQDGPAMAKLRIRPWHNTELLGPYRFFDVQGMHASAPKGHSLVNMAELRVA MRLYDRLVQDFPTYDFAGKIGIITPYKGQLRELKQHFANKYGNAIFKAVEFNTTDAFQGR ECEVIIFSCVRASNHGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLARGEFWRGLINDAR ERQLYTDGDVYKILQSPQRSLVPNDIEMTDASMDPIVSEPSSRPGSSVTGGNGSSRPASR LSNDTTNGLSIDDVPSRSGMLTPVRLPDVAGGGGNGLNEKLACGYCGSLLHIAQNCDNYE AKTVSQGTCFRCREEGHSKRDCTAIRCMVCGMFGHVAEICKSNRVLTKTEKDRIMREEHQ FRTLQKRKADIRKEKQLGDHDPKVPTIQVPGTTPRPSDSRQGQPNAATKMAGKRKHMDSD APDRKDSKIPRSGHNAQPANAPKGLKGRKFDPHSVAPPAGDLVIPSKDSPGHRPIDAKGQ DKPTAVAPSGNGVSVLRNGPMKRPPIRKKKPVDPFIRPKRR NT seq 6426 nt NT seq  +upstreamnt  +downstreamnt atggcagagttgctaggaactctcggagagcttaaagccctgtcgaatgaactccaccta ctctgcccgcgtcaaaacgatgatgacaggtcgcaatacaaggagaaacatgtcgatagg gaaaaatgcaagagaaatgacgaggacgcgtgcaagcgactcgcagaaattcgaaaagcg cgggaagaggcgaggatacgccgcgagaaattcctgtcatgtatgccgctattggctttt cacgaggcagaattgatcgagcatcagacttggatatggaatcgtcttcagcaaagtctt gagagctgtgagctttgcattatagaatattacaagggcaaatcgtggttatgggagaca cttaaagagcactacgaagaaagtgaggttgcgcagtttggcaagatgctggatgattgg gatataggccgcattttgaaccatttggattcagctgcccagacattaagcagcctcgac cctagtcagaggtgccctgagattttggacaggtcaggcttgtgtgcaatttttgaagca ctgaactgtcaagcgttgatgaagcaggaggacaaattccgtcagcatttcgatgaacca tttaaattggtccaaactcatcagcgcctacgaattatggagtatgtccctggattgagt cgatttatctttgatccggaccctcttcgaagcaaatgggctgagcttgcttgggaaaaa gtgcccgaaccccttaccaaagaagacttcgaacaagcagtcaaggagccacttatgcca gcgttgtctcaagctacctatcagccttatcagccggatatcgtcgagagattatggcgg ggattgtatctcattgttcaaagatgcgatgagggaatcattactcataatttaagagga cttgaaatcgacatctgccgcctgtctgtcgaacaccttgagattcagggcccttgcctc cggccactattgaatacgatccgtgttcttgtcgaaaaggcgccaagagtattctgggat gcgatgcaaacaattccaccacaggctattctcgaacgcatctttcacaatccacaactc gacaagcttttccgtgaaatggtggaggaggagccttttgagatgtccgccttgagaggc gtattgttgtttctgcactcttttgtgagatcgcttttggatgcacaccggccgcaaaca tgtcgatatttgacgtatcagctacttactcgcatccaagagtctgaatttccagaagta gtgaagttttactgcataaacgccggcttgtcggttataattatgcttcttcgaagcttc acagaagattccacctccaggggctctgtggcgaccgtcgttttatccgagacgctggaa atagtcaccaagcatattaacataatattcaaccccccaaaattcgtcattaatggcaaa cccatggaccttgtacctctctgtaccgatgttgtgcggaatgttttgtctttcgaatgc gaatcgctgaaagccgactacgggatgatcctagagaacaagaacctgcaacaaaatgtg agtacttacactccggttatttgggatgaggttgtcaggcatctccacgaaggtaatatt gcgctgtcacgctccgcgttgatcggtttatatcctcttccgggcttggaaaaattcccg actagaggagaaaataatccggaaaagacacattacaatacgatgtatggccatattacg cattgtttttgcctgatactggaaagactggcggatttcaagccagagaaacttgacgag ctattccaggatccctcagcgcctttggcccctatctctgctcttttctccgcagatttg aatacctaccaggcggctattgatcttatcaaaacagtcagcgggcaatccggtcgcaga gaggcgatttcacacctgtttcaagccttttggacatctacactgtatgcctttagctgg tcctatcgtcggattgccaagatgaaaacgttcgcttctgcaccgaggatggtaaaaacg ggaaccgatatcattgacgtcctttgtgactctcaaacaggaattcttagaagtcgtaaa ctggccgacgatgcggagaccgcttctcttcaaaagctctgggagtaccagtgggttggg ctgaccacgatatttaaccagacggaggcatggcacaggacaggagttgataggaccact atgatggagttctgccgggatacgatgcaattcgccgatctcctttttgatcagttccct atttttgtgaccgccattgttgagtcgaactccagtatctctaaatccgccagtgaaatt cttctaaaagcgccaactaagacaatgagtggaatggtgaagtggcttcgcctgaaggac gaataccttgctaccaccttgggaggtttggtggtgaaactcttacgccgcctgggagaa ttaaatgtagaattgcccgaggacgcaataaacttcatacggggcgtagcggtgacatcg gaagtcaagacaatcctcacgcaacgagagaaggcagagcttgttagggcgctggaagct tactatggagagcctttagcacccacacaagctacactacctatcattaagaagcagaca acgatcagggactttgcgaaacctgtcgacagatccgcggtatctaccccgaaagagtct acggaggaagaattcagtgaggatattccggatgaaacactcatgcagctttcttcgtcc gttgagctaaacaaggcaagattagctgccacgtctaaaaagacagaaaagcggatatct gtggctcccaagcctctactgaaaccgtcgccactaacgcagagtgtccagtctttccgt gaaaagcgagaaagagaaagagaagagaagaaaagacgggataaactggaggcagatcgc cgaaaaaagaactcagcttttcttggtgttgccgaacagacgatgtctcagggctctggt cttgattccatcagtgttgatatcaccgagccgaagccggtcgacagtatgatggtttcc caaactagctccgaatctgagagtgatgatgaagaccaaggaacgcttggacagaaaacg cctatgaaaccagatgcggtcagagcatatgaagaaagcaagaagatgcgattacaacaa cgtatgcctgtcaagaagatcaaggtagctcgctccgctaaggacatgagggcaagactc tcaccagatttgactacgcttcataagacaatactgagttgggatttttttgcgaccggc gaccttccacctaattgcggtcgaacagattatactcttgtctcaaatacctttacgaat gccttggagtaccaacgaactttcgaaccgcttttgatcctagaagcgtggcagggattt caatctgccaaagaggacggtacattcaagccgttcgagataacagtcgccaaccgagtt tcggtcgataattttgtagaagttagcacttctatggcaccacagacagtgaaggatctt ggactaggcgaggcagatatgattctcatctctaaaggcagtaacccaacgacagactcc aaagcgcatcattgcttggctcgtgtaagtggcctcatcaagaaaaaggggcagatggag ataacgtatcgtgtaaaccccatgaacccactaataaacaccatttcacccggagcgagc ttatacggcgtacggatctcttcgcttacgcctctggagcgagaatatggtgctctgatg gcgctgaagtactatgacctgagcgatgagatcataagggcgaagccatctcccatcctc aactatagcacagaatctgtaaaacatattctcggcacgtatgatctgaatctggctcag gcaaaagcggtaaagtctgcaatggataatgatgcctttacgttgatacagggtccgccg ggttcaggaaagacgaaaacgatcgtcgcacttgtgggtgctctattaactcccaccctg tctgaacatcgaattgccccccctcgtcctggtgataaaaccgcgcggacattggcgaag aagctgctcgtctgtgcgcctagtaacgctgctgtggacgaattagttatgcgattcaaa gagggcgtcaaaacactacagggaagggcccaaaagatctcggtccttcgactcggtcga agtgatgctatcaatacgaacgtcttggatgttacgctagatgaacgtgtgaatgcgaaa ctcagtgagattggccagaaaaatgggagtgaaagggatcttcaaagcctttacacggag cataaagatacgtcgaacaagttcaacgaaattcgagagcggatggaccaatgtcgagca aaggcccaagctcttccagctgaactcgagagggaatttgatttactaaagaaaaagaaa gcacagctcagtcaagcaattgattctgctcgagataaaaaccaagcagctgctcgtaac gcagagctaacacgcagaaaaatacagcaagaaattatcgatgaagctcatgttatttgc gctacacttagcggcagtggccacgagatgttccagactttgagcattgaatttgaaacg gtcattattgatgaagccgctcaatctattgaactcagtgcactcattccactaaagtac ggctgttccaagtgtattttagttggtgatccgaagcaattaccgccgactgttttgtcg aaagaagcgtcacgattccagtacgagcaaagtttgtttgttagaatgcaggcgaaccat ccacaggatgtccacttgttggatacccagtatcgtatgcatccggagataagccgattt ccaagtgctgcgttttatgatgggcgacttcaagatggccctgctatggctaagctgcgg attcgaccttggcataatactgagttacttggtccataccgcttcttcgatgttcaagga atgcatgcgagtgcaccaaaaggccactcactcgttaacatggcggaactcagagtggca atgcggctgtatgatcgattggtccaagactttcccacttacgattttgcaggaaagatt ggaattattactccatataaaggtcagctaagagaactcaagcaacattttgctaataaa tatgggaatgccatctttaaggctgttgaatttaatacaaccgatgctttccaaggcagg gagtgtgaagtgatcattttctcctgcgtcagagcttccaaccatggcattggtttcttg gccgatatccgtcgtatgaacgtgggtttaactcgtgccaaatcatctctttgggttctg ggcaattcgcaatctcttgctcgtggagaattctggagagggctaattaatgacgcgcgg gaacgacaattgtataccgatggtgatgtgtacaaaatactacagtcaccacaaaggagc ttggtgccgaatgatattgaaatgactgatgcttcaatggatcccattgtttcggagcca tcttcaagacctggttcctccgtgacagggggcaacgggagcagcaggcctgcctcaagg ctttcgaatgataccaccaacggcctatcgatagacgacgttccctcccgcagtggcatg cttacaccagtgcggcttcctgatgtagctggtggcggaggaaatggtttgaatgagaag ttggcttgtggatattgtgggagtcttttgcacatagcacaaaactgcgacaattatgaa gcgaaaaccgtcagtcaaggaacatgttttcgatgtcgcgaggaaggtcattcaaagaga gactgcaccgcaattcggtgtatggtgtgcggaatgtttggccatgttgctgaaatatgc aaatctaaccgagttctaacaaagacggagaaggataggatcatgagagaagagcatcaa tttcgaacgcttcaaaaaagaaaagccgacattagaaaagagaagcagctgggagaccac gacccgaaagttcctaccatccaggtaccagggacaacccctcgcccgagcgattcccgt caaggccaaccgaatgcagccacgaagatggctggaaagcggaaacacatggactcggat gctcctgatagaaaggattccaaaattccgagatccggtcacaatgctcagccagccaat gcacccaaaggcttgaagggtaggaaatttgatccacattcagtggcaccaccagcgggt gatctcgtgataccttccaaggacagccctggacatcgtccaattgatgcaaaaggccag gataaacctacagcggtggccccaagcggaaatggtgtgtctgtgcttcgaaacgggccg atgaaacggcctccaatccgcaagaagaaaccagtagatccgttcattcgtcctaaacga aggtga

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