Coccidioides immitis: CIMG_05822
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Entry
CIMG_05822 CDS
T01114
Name
(RefSeq) 3' exoribonuclease
KO
K12586
exosome complex component RRP43
Organism
cim
Coccidioides immitis
Pathway
cim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIMG_05822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_05822
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CIMG_05822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
4561878
NCBI-ProteinID:
XP_001241926
UniProt:
A0A0E1RWF2
LinkDB
All DBs
AA seq
410 aa
AA seq
DB search
MTSTAPNTKAPATPSPFLSLSPAHLARLQPHTYVYAHLNPSPDISRPSIRINGRTESQFR
PASVNTGSLSHTNGSAVVRIGDTTAVCGVRGEILSTHDIPAWKVSNNGAGSSWGSPQKRN
QDHDAEDEDYDEDDSEIHAFNLLVPNLSLSTGCSPSILPGSAPSSLAQSLSHQLLSLLHS
SRLIRASDLRIWSNPNPTQAPSQEQSEDIDMEDTPAFTDSVGAPELKAFWTLYIDVLIIS
HAGSPFDAAWAAIVAALQDVRLPKAWWDIDNDMVLCSDRVSESKKLRLRGMPISSSFAVF
EADPVGDWRKVIIPLQDGEPKEKDQTSADDGDAARRKRWILADPDAFEESLCQERVCIVV
DKDGKKPGCMKILMMEKGGGFYVGKSEIKGLVELASVRWEEWRALLEGVR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgacatccacggcccctaacacaaaagctccggctacaccttcgccgtttctttcgctt
tcacccgcccacctcgcccggctccaaccgcatacctacgtttacgcgcatctaaaccct
tcacctgatatttctagaccatccatccgcataaatggtcgtacagagtcccaattccgc
ccggcaagtgtcaacactggctctttgtctcacacgaatggtagcgcggttgttcggatt
ggcgacacaactgcggtatgtggggtccgtggggagattttatcaacacatgatataccc
gcatggaaggtttcgaataatggtgcaggttctagctggggttcgccacaaaagcggaat
caagaccatgacgccgaggacgaggactatgatgaagacgactcagaaattcatgcattc
aacctcttagttccgaatctctctcttagcacgggctgctcgccgtctatacttcctggt
tctgcaccttcgtcgctcgctcaatcgctatcacaccagctcctttccctccttcattcc
tcacgactaatacgagcaagtgatttacgaatttggtccaatccaaaccccacgcaagct
ccatcccaagaacaatctgaggatatcgacatggaggatactcccgctttcactgactcg
gttggagccccagagctcaaggcattttggaccctctacattgatgttctaataatttcc
catgcgggaagtccgttcgatgcagcctgggcagcgatagttgccgcgttacaagatgtg
cggcttcccaaagcgtggtgggacatagataacgacatggttctttgttcagatcgtgta
tcggagtccaaaaagttgcgattgcgggggatgcctatatcaagctcatttgctgttttt
gaagcagatcctgttggagattggaggaaagttattattccacttcaggatggagagccg
aaagagaaagaccagacgagtgccgatgatggcgatgctgcaagaaggaaacgatggata
cttgcggatcctgatgcttttgaggagagtctttgtcaagaacgggtatgcattgtagtg
gataaggatgggaagaagccgggttgcatgaagattttgatgatggaaaaaggtggtgga
ttctacgttggaaaaagtgagataaaaggacttgtggagttggcatctgtgaggtgggag
gagtggcgcgccttattggaaggggtgcgatga
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