KEGG   Coccidioides immitis: CIMG_06005
Entry
CIMG_06005        CDS       T01114                                 
Name
(RefSeq) DNA repair and recombination protein RAD5B
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
cim  Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:cim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cim04121]
    CIMG_06005
   03400 DNA repair and recombination proteins [BR:cim03400]
    CIMG_06005
Enzymes [BR:cim01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CIMG_06005
Ubiquitin system [BR:cim04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    CIMG_06005
DNA repair and recombination proteins [BR:cim03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    CIMG_06005
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf-C3HC4_3 zf-Nse zf-C3HC4_4 zf-RING_5 zf-RING_11 zf-ANAPC11 U-box DEAD HDA2-3 RING_XB3-XBAT31 Prok-RING_4
Other DBs
NCBI-GeneID: 4561906
NCBI-ProteinID: XP_001242109
UniProt: A0A0E1RVR8
LinkDB
AA seq 900 aa
MPPRRTSKTPTSVQRVVHHDDDEVALSSQARSAPRQYVPSQTLSQPALPPENFLSLSQRL
PDTQAELEEEANAAAVVESSQEYYNGQATKGEYVNIRREPGNPYDSNAIRIDNVMGDQIG
HLPRQLASKLAPYIDSADLLVEGVLAGNKGVYECPISLRLYGTSEPRQQLELVARMKRQG
LPVAELLMKNSDRKKRQLQELKAAAANSSRARKNIGRGEEWNKSDNAFGVNMAPPGGHSD
EKNKNQESIDDIIGQSVVFNPREMSQVVEKFGADEKELAAMPMAECPASLSTELLPYQRQ
GLAWMLDKESPQLPGIGREDVVQLWKRQAQAYKNIATGYVTNQAPPLASGGILADDMGGI
RSIFEDHTDYLSAWSDEQLERQIATHVKQENALKVLVYHGTGKKEAEKLDQYDVVITTYG
ALAMEFGQVDGKSPKALKPKQGLFSMRWRRVVLDEGHTIRSPRTKGARAACALEADSRWS
LTGTPIINNLKDLYSQLRYLRISGGLEDFSVFNSALIRPLKDEDPNANLVLQALMATICL
RRKKEMGFINLRLPPMQYPSCELLPYPLSQTNEMTTRAEAKGVLMEYSNGKKSNVTYSHL
LEVILRLRQVCNHWKLCQSRINSLMDLLEKEKIVSLTPENVKALQALLQLNIESQETCPI
CLDSLDQPVITACAHTFDYSCIEQVIERQHKCPLCRAELADTSNLVHPAVALGEDDSKVD
VDPEESSSKIQALIKILTAHGQAPGSKTVVFSQWTSFLDLIEPQLVKHNITFTRIDGKMS
STKRDVAMATLTNDPNCTVMLASLNVCSVGLNLVAANQVILTDSWWAPAIEDQAVDRVYR
LGQKRPTTVWRLVMEGSIEDRVLDIQKRKRDLMTTAFREKNSKTGEQQRARLADLEKLLQ
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgccaccccgaagaacttcaaaaaccccgacatccgtgcaacgggtggttcatcacgat
gacgacgaggtggcattgagctcgcaggctcgtagtgcgccaaggcaatatgttcccagc
caaaccctcagccaacctgctcttcctcccgaaaattttctttcactcagccagaggctt
ccagacacccaggccgagctggaggaagaagcaaacgctgcagcagttgttgaatcctcc
caggaatattataatgggcaggcgaccaaaggagaatatgtgaacattagacgcgagcct
ggcaacccctatgattccaatgcaatccggatcgacaatgtcatgggcgaccaaatcggc
cacttacctcgccagctggctagcaaattggctccctacatagattctgcggacttacta
gtagagggtgttctagcgggaaacaagggtgtctacgaatgtccaatcagcctaagacta
tatggaaccagtgagcccagacagcaactagagctcgtagcgagaatgaaaaggcagggg
ctgccggttgcagagctgctcatgaaaaacagcgacaggaagaagcgtcagctgcaggaa
ttgaaagccgccgccgccaatagctccagggcacgcaaaaacattggaaggggtgaggaa
tggaacaaatcggacaatgcctttggcgttaatatggctcctcccggagggcattcggac
gaaaagaataagaatcaagagtctattgacgacattatcggccaaagcgttgtcttcaac
cccagggagatgagccaggtcgttgaaaagtttggcgctgatgagaaagaacttgcagca
atgccgatggcggagtgtccggcctcgctttcgacggaattgttaccatatcaacgtcaa
ggactcgcgtggatgttagataaggaatcaccacagctaccagggattggacgtgaggat
gtggtgcagttgtggaagcggcaggcccaggcgtataaaaatatcgcaactggttatgtc
acaaaccaggcacctccacttgccagcggtggaatccttgcggatgatatgggtggcatc
cgctcaatcttcgaggaccacactgattatctctccgcttggagtgatgagcaattggag
agacagattgctacccatgtcaagcaggagaatgcgcttaaagttctcgtataccatggg
acaggtaagaaagaggccgaaaagctcgaccaatacgatgtagtaatcaccacttatggt
gcacttgccatggaatttgggcaagttgatggcaaaagccctaaggccctgaaaccaaag
cagggccttttctctatgcgctggcgccgagttgtcctagatgaagggcatactattcga
tctccacggaccaagggagcaagagcagcttgcgctctggaggccgactctcgatggtca
ctgacggggacacctatcattaataacctgaaagacctatactcacagcttagatacctc
cgtatatctggtggattggaagatttttctgtctttaacagtgcactaatccgaccgctc
aaagacgaagaccccaacgccaatctcgttctccaggctctaatggcgacaatttgtcta
cgccggaagaaggaaatgggattcatcaaccttcgccttccgcccatgcaatatccttca
tgtgaacttctaccctaccccttgtcccaaactaacgaaatgactaccagggccgaggcg
aagggtgtccttatggaatattctaacgggaaaaagtcgaatgttacctattcacactta
cttgaggttatcctgcgccttcgacaagtctgtaaccattggaaattgtgccaaagccgc
ataaatagcctcatggatctgttggagaaggaaaaaattgtatctttgacaccagaaaat
gtaaaagcgctccaggcgctcctccaactgaacattgagagtcaagaaacgtgccctata
tgcctcgattctttggatcagccagtgatcacggcttgtgctcataccttcgattattct
tgcatagagcaggtcattgaaagacaacacaaatgtcccctttgccgcgcagaactcgca
gatacgtcgaatcttgttcatcccgctgttgctctcggtgaagacgacagcaaggtggat
gtcgaccctgaggaaagcagcagcaaaattcaagctttgattaaaattctaacggcacat
ggtcaggctccgggaagcaagacagttgttttcagtcaatggacatcgtttcttgacctg
attgagccgcagcttgtaaaacacaatatcacttttacccggatcgacggtaagatgagc
tccaccaaacgggatgtggccatggcgactttgaccaatgatccgaactgcactgtcatg
ctcgcgagtttaaatgtctgcagcgttggcctcaatcttgtggccgccaaccaagttatt
cttacagatagctggtgggcgcctgccatcgaagaccaggcagtggatcgcgtctatcga
ctgggccagaaacgacctactacggtatggcggcttgtgatggaggggagcattgaagat
cgagtactggatatacagaaacgcaagcgtgatctgatgaccaccgcttttagggagaag
aattcaaaaacgggcgagcaacaaagagcgagattggcggatttggaaaagctgctgcag
tag

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