KEGG   Coccidioides immitis: CIMG_06056
Entry
CIMG_06056        CDS       T01114                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
cim  Coccidioides immitis
Pathway
cim03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CIMG_06056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cim03021]
    CIMG_06056
Transcription machinery [BR:cim03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     CIMG_06056
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 4561122
NCBI-ProteinID: XP_001242160
UniProt: J3K7B7
LinkDB
AA seq 479 aa
MGSGTPEKKRKRASEKHDRPSKKPAIESVMPPLKVKFIENDAGPVPVIASTPGIRLPESL
SLQAYTKPRAKRASTTATTNSDVISSELLLHSSSHPKLDFTAREGVDQLDSLWNHYVAIY
DPKRNALQLVEARKVTVRSSLREAVPDEEEESDEEVKTAFSKRSALAEAFGTKQSRKAIQ
SIAENALLSNAPGGAPNAAESALLSSMPKDEISTVPAEKTAQQEIQAAKPLPQPNLSAQH
PSDVYSLDSLIPGGLSTLHSMPIRDWQNSLAKSEAILTRSRFVSRRVEAVGKSGDKTQLQ
LLRFILLLIEFAGSLKPTRGADKASPGSKKLPLREDLRRKLSEATNPKNSTAPQFVTDSL
IDSLRRKFVPQGAILARNDITFLLTTICALTLHIPPASGAPHAPNELATDPADLRDDLSL
ENQTALQYFKELGCRIDKPRESEYAKWGIKKGKTEAAMKRIARLRIPVEFPKVSRGGRR
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgggctccggaacccccgaaaagaaaagaaagcgcgcctcagaaaaacatgaccggcct
agcaaaaaaccggctatcgagtccgtcatgcctcctctaaaggtcaagttcattgagaac
gacgctggaccggttccagtgattgcttctacgccgggaattcgtctccctgagtctctt
tctctccaggcctacaccaaaccgcgtgcaaagcgtgcttccaccacggctactaccaat
tctgatgtcatttcttccgaattactcctgcattcgtcttcgcatccgaagctggatttt
actgcgagggaaggtgtggatcaattggattcgttgtggaatcattatgtggccatctac
gatcccaaacgaaatgcgttgcaattggttgaggccagaaaggtcactgtgagaagctct
ctgcgcgaggcggttcctgacgaagaagaggaatctgatgaagaagtcaaaaccgcattc
tccaaacgatctgccctggcagaagcctttggcactaagcaatcccgcaaggccatacaa
tcgatcgccgaaaatgccctactctccaacgcgccgggcggagcgcccaacgccgcagaa
tccgccttgctctcctcgatgccaaaggacgaaatatccaccgtccccgccgaaaagaca
gctcagcaagaaatccaagccgccaaaccgcttccacaaccgaacctgtccgcacagcat
ccatcagacgtatactctctcgactctttaatccccggcggcctctcgacactgcactcc
atgccaatccgcgactggcagaactcactcgcgaaatccgaagcaatcctcaccagatcc
cgcttcgtctcccgtcgcgtcgaggcggtgggcaaatccggcgacaaaacgcagctacaa
ctcctccgattcatcctcctccttatcgaattcgccggcagcctcaagcccacccgcggc
gccgacaaggctagccccggcagcaagaagctccctctccgcgaagacctgcgccgcaag
ctctccgaggcgaccaatccgaagaacagcacggcgccgcagttcgtcacggattcgctg
atcgattcgctgcgcaggaagttcgtgccccagggtgcgatcttggcgcggaacgatatc
accttcctgctcaccacgatctgtgctctgaccctgcacatcccgccggcgtcgggggcg
ccgcatgctccgaatgagttggccactgatcctgcggatctgcgcgatgatttgagtctg
gagaaccagactgcgttgcagtattttaaggaattgggctgtcggatcgacaagccacgg
gagagtgaatatgcgaaatggggtattaagaaaggaaagacggaggctgcaatgaagcga
attgcgagactgaggataccggtggagtttcccaaagtgagccgtggtggcagaaggtga

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