Coccidioides immitis: CIMG_06230
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Entry
CIMG_06230 CDS
T01114
Name
(RefSeq) RNA polymerase-associated protein CTR9
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cim
Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cim03021
]
CIMG_06230
Transcription machinery [BR:
cim03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CIMG_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_16
TPR_14
TPR_12
TPR_17
TPR_7
TPR_11
SIL1
LOH1CR12
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
4562130
NCBI-ProteinID:
XP_001242334
UniProt:
J3K7Q4
LinkDB
All DBs
AA seq
1210 aa
AA seq
DB search
MASFQNGYVNGSTVALDNAANAPPANLRFSDIPSAIDIPASSFDTEVEISLEELPEDPTE
LCTLLDNEQATKNFWVIISLAYAKHNQLDLAIEILNRGIASLSHGASVEKLGLLNWICWL
YLLKSRQAPRVAPEGQLLSEARTKDYYLQAATATLNEATRMNPAFPPLFLARGVLSLLRA
SLQPPAKPIRPGTVDTSERVESLRQALKCFDESSKAFGNRNVMAILGRARAQYMLGRYAE
ALEGYQDVLMKMPNMTDPDPRIGIGCCLWQLDFKDQAKAAWNRALALNPNSKVANILLAA
YYLYDSSRHATTDPAFGSLYKLAMTQYTQKAFKLDKEYPLTCAMFGGYFLLRRHFPTVEA
LARKAIELTDVNAIASDGWYLLARKEHEEGDPSKAQEYYNRSDQARGGSDKGYLPAKFGA
VQMQIKAHDKDGAKFRLEKIFQQKKNPEAMTLLGSLYAEEIFEALASGNKEDKSTEIKKA
IGLLEAVRASWKDEKKKISPDISVLLYLARLYETSAPEKSMQCLSQIEQIQLAQIPQEDR
PDNVEDEETMTNILRERLAPQLLNNMGCFFYQADKIEQARNMFQTALNACVKTQEKDDGT
DTDALVTTISYNLGRTYETAGMPEEAEKVYKGLLERHSDYTEANARLTYMALRQSPTDEG
PKKMAKLYEAEATNLEVRALFGWYLNKSKRRTANIAEDHEQRHHKHTLQGYDKHDRYSLT
AMGNIHLMVARDMRRDGEQDREKRRKVYERAVEFFDKALQLDPKNAYAAQGIAIALVDDR
KDYASAVQVFSKVRDSIRDASVYLNLGHVFAELRQFSKSIENYEIALSKDRAKDPQILSC
LGRVWFLKGKQERSITSMRTALEYAERARAVAPEQKHLDFNIAFVQNEIAHLASNLPETQ
KTSQEIEEALSGLDEAVVTFEKIAKAPNPPYPPISLEQRANMIRNTTINQLQRALQSQKE
YEEKNAAKLQQAREARDAEQRRREEKRRKAEEAEAERKRQIAEERQQMVEEAQRLAAIRA
EEEKAREAAEYTTDSETGDRVKRKKASGGKRKKKGEDGERETSRKSRAKSAASSRTPATS
DAEDQPAPRKRRRLERRATAKSSKYKSSEIVVESESDEETGAPASNGSPPTADERDERMR
DTGHLDEDDEDTLVSRRRKKVNLRIEDDEDEDEGEHDDLFDEKPGSEGEEAKAGDDIGVD
AEMKDAEDEE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttttcaaaatggctatgtgaacggctctaccgtcgcgctggacaatgcagct
aatgcgccgcccgcaaatcttcgcttctccgacatcccttctgccatcgatatcccggca
tcctcctttgacaccgaagtcgaaattagccttgaagaactccccgaagatcccaccgag
ctctgtactctccttgacaatgagcaggccacaaagaatttttgggtgataatctctctt
gcttatgctaagcacaatcaacttgatctcgctatcgagatcctcaatcgtgggattgcg
tctctatctcatggcgcgtcggtggagaagctcggcttgctgaactggatctgttggtta
tacttgctcaagagcaggcaggctccgagagtcgctccggaaggacagttgctgtccgaa
gcgagaacaaaagattactatcttcaagccgcaaccgctaccctcaatgaagccactcgg
atgaacccggctttcccaccgctcttcctcgcgcgaggtgtcctttctctcctccgtgca
tctttacagcctccagcaaagccgatcagacccggcactgtcgacacctccgagagagta
gaatctctgcgacaagcgttgaaatgtttcgatgaatcctccaaggctttcgggaataga
aatgtcatggctatactgggtcgagcaagagcccagtacatgttaggacgctatgctgaa
gctctggaagggtatcaggatgtcctgatgaaaatgccaaacatgacagatcctgatccg
cgaatcggtatcggttgctgcctgtggcagcttgattttaaggaccaggctaaagcagct
tggaaccgcgcccttgctctgaatcccaactccaaagttgcaaacatcctcctcgctgcg
tattacctttacgatagctctcgtcacgcaacaaccgatcctgcctttgggtccttatac
aagcttgccatgactcaatacacccaaaaagcgttcaaacttgataaggaatacccattg
acttgcgctatgttcggcggctatttcctcctccgcaggcattttccgacggttgaggca
cttgcaaggaaagccattgagctcactgatgtcaatgccattgctagtgatggttggtat
ttgctcgcacgtaaagaacatgaagagggcgatccgtcgaaggcgcaggaatactacaat
cgatccgaccaggcaagaggcggttcggataaaggatatctccccgctaagttcggagct
gtgcagatgcagatcaaggcacatgacaaagatggggcaaaatttcggcttgaaaagata
ttccagcagaagaaaaacccggaagcgatgacgctgctaggctctctttatgctgaagaa
atatttgaagccctggctagcggtaataaagaagataaatccaccgaaattaagaaggcc
attggtctccttgaagctgtacgcgcctcgtggaaggatgagaagaagaaaatatctccg
gatatatccgtactgctctaccttgctcgcttgtatgagaccagcgctccggagaagagc
atgcaatgcctttctcagattgaacagatacaacttgcccaaattccacaagaggataga
ccggataatgttgaagatgaagaaacgatgaccaacatcctccgagaacgtttggctcct
cagctactcaacaacatgggctgcttcttctatcaggccgataaaattgaacaagctcga
aatatgttccaaacagctctcaacgcctgtgtgaaaacacaggagaaagatgatggaacc
gatacggatgcgcttgttacaacgatcagttacaatctcgggcgtacgtacgaaactgcg
ggaatgccagaagaagccgagaaagtatacaaaggacttttggaaaggcatagtgactac
accgaagctaatgcccgtctcacgtacatggcactccgtcagagcccaactgatgaaggg
ccaaagaagatggcaaagctgtacgaagcagaagctaccaacttggaagtccgcgccctt
tttggatggtatctcaataaatcaaaacgtcgaactgccaatatcgcggaagatcatgag
cagcgacatcataaacatactcttcaaggttatgacaaacacgatcgatactccttgacc
gctatgggtaacatacacctaatggtggctcgagacatgagacgggatggagagcaagat
cgagaaaagcgtcggaaggtatacgaacgagccgttgaatttttcgataaagcccttcaa
ctagacccgaagaatgcatatgccgcccaaggaattgcaattgcattggttgatgacaga
aaagattatgcatcagcggttcaagtattttccaaagttcgagattctatacgggacgca
agtgtttacctgaacttgggacacgtctttgcagaactaaggcaattctccaagtctatt
gaaaactatgagattgctctctcaaaagatagggccaaggatccacagattctctcttgc
cttggccgcgtatggttcctgaaaggcaaacaagagcgaagcatcacttcgatgaggacc
gctttggagtatgcggaacgtgctcgcgccgtggcccccgaacagaagcatcttgacttc
aacattgctttcgtccaaaacgaaattgctcatctcgcctcgaatcttccggagacgcaa
aagacgtcccaggagatcgaagaagccctgagcggacttgacgaagccgtggtgacattt
gaaaaaattgcaaaggcaccgaatccaccttatccgcctatctcacttgaacagcgagcg
aacatgatcagaaacacaacaatcaatcaacttcagcgtgctttacaaagccagaaagag
tatgaagaaaagaatgccgccaagttgcaacaagctcgggaggcccgtgacgctgaacag
agacgacgagaagaaaaacggcgtaaggccgaggaggccgaagcggaaaggaagcgccag
attgcggaagagagacagcagatggtcgaagaggcccagcggcttgctgctattcgggct
gaagaagagaaggcaagagaagctgctgagtacactactgactccgagacgggagacagg
gttaaaaggaagaaggcttctggtggcaagcgaaaaaagaaaggagaagatggagaacga
gaaacgtcgaggaagtccagagctaagagcgcagctagctcacgcacacctgccacttcc
gatgccgaagaccagcccgctccaagaaagcgaagacgtttggaaagaagagcgacggcc
aagtcaagtaaatacaagagcagcgagattgttgttgagtctgaaagcgacgaagagaca
ggcgctccagctagcaacggtagcccgccaactgcagacgaacgagatgagaggatgcgt
gacaccggccacctcgatgaagacgacgaagataccctggtgtcgcgtcggcgtaagaag
gtcaatttacggatagaagatgatgaggatgaggacgagggagagcacgacgacttattc
gatgagaagccgggaagcgaaggggaagaagccaaggcaggtgatgatatcggtgtagat
gccgaaatgaaggacgcagaagacgaggaatga
DBGET
integrated database retrieval system