KEGG   Coccidioides immitis: CIMG_06230
Entry
CIMG_06230        CDS       T01114                                 
Name
(RefSeq) RNA polymerase-associated protein CTR9
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
cim  Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:cim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cim03021]
    CIMG_06230
Transcription machinery [BR:cim03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     CIMG_06230
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_8 TPR_19 TPR_16 TPR_14 TPR_12 TPR_17 TPR_7 TPR_11 SIL1 LOH1CR12 ARM_TT21_4th
Other DBs
NCBI-GeneID: 4562130
NCBI-ProteinID: XP_001242334
UniProt: J3K7Q4
LinkDB
AA seq 1210 aa
MASFQNGYVNGSTVALDNAANAPPANLRFSDIPSAIDIPASSFDTEVEISLEELPEDPTE
LCTLLDNEQATKNFWVIISLAYAKHNQLDLAIEILNRGIASLSHGASVEKLGLLNWICWL
YLLKSRQAPRVAPEGQLLSEARTKDYYLQAATATLNEATRMNPAFPPLFLARGVLSLLRA
SLQPPAKPIRPGTVDTSERVESLRQALKCFDESSKAFGNRNVMAILGRARAQYMLGRYAE
ALEGYQDVLMKMPNMTDPDPRIGIGCCLWQLDFKDQAKAAWNRALALNPNSKVANILLAA
YYLYDSSRHATTDPAFGSLYKLAMTQYTQKAFKLDKEYPLTCAMFGGYFLLRRHFPTVEA
LARKAIELTDVNAIASDGWYLLARKEHEEGDPSKAQEYYNRSDQARGGSDKGYLPAKFGA
VQMQIKAHDKDGAKFRLEKIFQQKKNPEAMTLLGSLYAEEIFEALASGNKEDKSTEIKKA
IGLLEAVRASWKDEKKKISPDISVLLYLARLYETSAPEKSMQCLSQIEQIQLAQIPQEDR
PDNVEDEETMTNILRERLAPQLLNNMGCFFYQADKIEQARNMFQTALNACVKTQEKDDGT
DTDALVTTISYNLGRTYETAGMPEEAEKVYKGLLERHSDYTEANARLTYMALRQSPTDEG
PKKMAKLYEAEATNLEVRALFGWYLNKSKRRTANIAEDHEQRHHKHTLQGYDKHDRYSLT
AMGNIHLMVARDMRRDGEQDREKRRKVYERAVEFFDKALQLDPKNAYAAQGIAIALVDDR
KDYASAVQVFSKVRDSIRDASVYLNLGHVFAELRQFSKSIENYEIALSKDRAKDPQILSC
LGRVWFLKGKQERSITSMRTALEYAERARAVAPEQKHLDFNIAFVQNEIAHLASNLPETQ
KTSQEIEEALSGLDEAVVTFEKIAKAPNPPYPPISLEQRANMIRNTTINQLQRALQSQKE
YEEKNAAKLQQAREARDAEQRRREEKRRKAEEAEAERKRQIAEERQQMVEEAQRLAAIRA
EEEKAREAAEYTTDSETGDRVKRKKASGGKRKKKGEDGERETSRKSRAKSAASSRTPATS
DAEDQPAPRKRRRLERRATAKSSKYKSSEIVVESESDEETGAPASNGSPPTADERDERMR
DTGHLDEDDEDTLVSRRRKKVNLRIEDDEDEDEGEHDDLFDEKPGSEGEEAKAGDDIGVD
AEMKDAEDEE
NT seq 3633 nt   +upstreamnt  +downstreamnt
atggcatcttttcaaaatggctatgtgaacggctctaccgtcgcgctggacaatgcagct
aatgcgccgcccgcaaatcttcgcttctccgacatcccttctgccatcgatatcccggca
tcctcctttgacaccgaagtcgaaattagccttgaagaactccccgaagatcccaccgag
ctctgtactctccttgacaatgagcaggccacaaagaatttttgggtgataatctctctt
gcttatgctaagcacaatcaacttgatctcgctatcgagatcctcaatcgtgggattgcg
tctctatctcatggcgcgtcggtggagaagctcggcttgctgaactggatctgttggtta
tacttgctcaagagcaggcaggctccgagagtcgctccggaaggacagttgctgtccgaa
gcgagaacaaaagattactatcttcaagccgcaaccgctaccctcaatgaagccactcgg
atgaacccggctttcccaccgctcttcctcgcgcgaggtgtcctttctctcctccgtgca
tctttacagcctccagcaaagccgatcagacccggcactgtcgacacctccgagagagta
gaatctctgcgacaagcgttgaaatgtttcgatgaatcctccaaggctttcgggaataga
aatgtcatggctatactgggtcgagcaagagcccagtacatgttaggacgctatgctgaa
gctctggaagggtatcaggatgtcctgatgaaaatgccaaacatgacagatcctgatccg
cgaatcggtatcggttgctgcctgtggcagcttgattttaaggaccaggctaaagcagct
tggaaccgcgcccttgctctgaatcccaactccaaagttgcaaacatcctcctcgctgcg
tattacctttacgatagctctcgtcacgcaacaaccgatcctgcctttgggtccttatac
aagcttgccatgactcaatacacccaaaaagcgttcaaacttgataaggaatacccattg
acttgcgctatgttcggcggctatttcctcctccgcaggcattttccgacggttgaggca
cttgcaaggaaagccattgagctcactgatgtcaatgccattgctagtgatggttggtat
ttgctcgcacgtaaagaacatgaagagggcgatccgtcgaaggcgcaggaatactacaat
cgatccgaccaggcaagaggcggttcggataaaggatatctccccgctaagttcggagct
gtgcagatgcagatcaaggcacatgacaaagatggggcaaaatttcggcttgaaaagata
ttccagcagaagaaaaacccggaagcgatgacgctgctaggctctctttatgctgaagaa
atatttgaagccctggctagcggtaataaagaagataaatccaccgaaattaagaaggcc
attggtctccttgaagctgtacgcgcctcgtggaaggatgagaagaagaaaatatctccg
gatatatccgtactgctctaccttgctcgcttgtatgagaccagcgctccggagaagagc
atgcaatgcctttctcagattgaacagatacaacttgcccaaattccacaagaggataga
ccggataatgttgaagatgaagaaacgatgaccaacatcctccgagaacgtttggctcct
cagctactcaacaacatgggctgcttcttctatcaggccgataaaattgaacaagctcga
aatatgttccaaacagctctcaacgcctgtgtgaaaacacaggagaaagatgatggaacc
gatacggatgcgcttgttacaacgatcagttacaatctcgggcgtacgtacgaaactgcg
ggaatgccagaagaagccgagaaagtatacaaaggacttttggaaaggcatagtgactac
accgaagctaatgcccgtctcacgtacatggcactccgtcagagcccaactgatgaaggg
ccaaagaagatggcaaagctgtacgaagcagaagctaccaacttggaagtccgcgccctt
tttggatggtatctcaataaatcaaaacgtcgaactgccaatatcgcggaagatcatgag
cagcgacatcataaacatactcttcaaggttatgacaaacacgatcgatactccttgacc
gctatgggtaacatacacctaatggtggctcgagacatgagacgggatggagagcaagat
cgagaaaagcgtcggaaggtatacgaacgagccgttgaatttttcgataaagcccttcaa
ctagacccgaagaatgcatatgccgcccaaggaattgcaattgcattggttgatgacaga
aaagattatgcatcagcggttcaagtattttccaaagttcgagattctatacgggacgca
agtgtttacctgaacttgggacacgtctttgcagaactaaggcaattctccaagtctatt
gaaaactatgagattgctctctcaaaagatagggccaaggatccacagattctctcttgc
cttggccgcgtatggttcctgaaaggcaaacaagagcgaagcatcacttcgatgaggacc
gctttggagtatgcggaacgtgctcgcgccgtggcccccgaacagaagcatcttgacttc
aacattgctttcgtccaaaacgaaattgctcatctcgcctcgaatcttccggagacgcaa
aagacgtcccaggagatcgaagaagccctgagcggacttgacgaagccgtggtgacattt
gaaaaaattgcaaaggcaccgaatccaccttatccgcctatctcacttgaacagcgagcg
aacatgatcagaaacacaacaatcaatcaacttcagcgtgctttacaaagccagaaagag
tatgaagaaaagaatgccgccaagttgcaacaagctcgggaggcccgtgacgctgaacag
agacgacgagaagaaaaacggcgtaaggccgaggaggccgaagcggaaaggaagcgccag
attgcggaagagagacagcagatggtcgaagaggcccagcggcttgctgctattcgggct
gaagaagagaaggcaagagaagctgctgagtacactactgactccgagacgggagacagg
gttaaaaggaagaaggcttctggtggcaagcgaaaaaagaaaggagaagatggagaacga
gaaacgtcgaggaagtccagagctaagagcgcagctagctcacgcacacctgccacttcc
gatgccgaagaccagcccgctccaagaaagcgaagacgtttggaaagaagagcgacggcc
aagtcaagtaaatacaagagcagcgagattgttgttgagtctgaaagcgacgaagagaca
ggcgctccagctagcaacggtagcccgccaactgcagacgaacgagatgagaggatgcgt
gacaccggccacctcgatgaagacgacgaagataccctggtgtcgcgtcggcgtaagaag
gtcaatttacggatagaagatgatgaggatgaggacgagggagagcacgacgacttattc
gatgagaagccgggaagcgaaggggaagaagccaaggcaggtgatgatatcggtgtagat
gccgaaatgaaggacgcagaagacgaggaatga

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