Coccidioides immitis: CIMG_06450
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Entry
CIMG_06450 CDS
T01114
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cim
Coccidioides immitis
Pathway
cim03013
Nucleocytoplasmic transport
cim03015
mRNA surveillance pathway
cim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CIMG_06450
09122 Translation
03013 Nucleocytoplasmic transport
CIMG_06450
03015 mRNA surveillance pathway
CIMG_06450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_06450
03041 Spliceosome [BR:
cim03041
]
CIMG_06450
03009 Ribosome biogenesis [BR:
cim03009
]
CIMG_06450
03012 Translation factors [BR:
cim03012
]
CIMG_06450
Enzymes [BR:
cim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CIMG_06450
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CIMG_06450
mRNA cycle factors
Stress granule specific factors
CIMG_06450
Spliceosome [BR:
cim03041
]
Complex C
Other components
EJC/TREX
CIMG_06450
Ribosome biogenesis [BR:
cim03009
]
Eukaryotic type
90S particles
Helicases
CIMG_06450
Translation factors [BR:
cim03012
]
Eukaryotic type
Initiation factors
eIF-4
CIMG_06450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Flavi_DEAD
Helicase_RecD
AAA_22
TniB
COG4_N
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
4561224
NCBI-ProteinID:
XP_001242554
UniProt:
Q1DTB3
LinkDB
All DBs
AA seq
399 aa
AA seq
DB search
MADNFDRTADERIEFTTSKEVTVAPTFDDMHLKENLLRGIYAYGFESPSAIQSRAIVQIC
KGRDTIAQAQSGTGKTATFAISILQVIDTALRETQALVLSPTRELATQIQNVIMAVGDYM
NVQCHACIGGTNVGDDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADDLL
ARGFREQIYDVYRYLPPATQVVVLSATLPYDVLSMTTKFMTDPVRILVKRDELTLEGLKQ
YFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQ
KERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGR
KGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLLG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaatttcgatagaaccgcagatgagaggatcgagttcacgacctcgaaggag
gtaacggtggccccgaccttcgatgatatgcatctgaaggagaacctcctacggggtatc
tatgcatatgggtttgagtcaccgtcagccatccagtctcgcgccatcgtccagatctgc
aaaggccgcgatactatagcacaggcgcaatccgggactggtaaaactgcaacgtttgca
attagcatcctacaagttattgacaccgcgcttcgtgagactcaagctttggttctttcc
ccgactcgtgaacttgcgacccagatccagaacgttattatggctgttggcgactacatg
aacgtgcaatgccacgcatgcattggaggaaccaacgttggtgatgatattagaaagctg
gaccatggtcagcatgtcgtatccggaacccctggtcgtgtcgcagatatgatccgacgc
cgccaccttcgcacacgtcacattaagatgctcgttctcgatgaagccgatgatctcctg
gcgcgcgggttccgcgaacagatttacgacgtttaccgataccttccccccgcaactcag
gtggtcgtattgtctgctactctaccttacgatgtcctctccatgaccacaaagtttatg
acagacccagttcgcatcttggtgaagcgtgacgaattgactttggaaggcttgaagcaa
tactttattgcagtggaaaaagaagaatggaaatttgataccctttgcgatctctacgac
actctcacgatcacacaggcagttattttctgcaatactcgccgcaaggttgactggctg
accgataaaatgagagaagcaaacttcacagtttcaagcatgcatggagaaatgccacag
aaggagcgagacagcatcatgcaagacttcagacagggaaattctcgcgttcttatatcc
accgacgtttgggcccgaggtatcgatgtgcaacaggtgtcattggttatcaactacgat
ctacccagcaaccgtgagaattatattcacaggatcggtcgaagcggacgctttggacgc
aaaggtgttgcgatcaactttgtcacaagcgaagatgtcaggattctgagggatatcgaa
ctctattattccacccaaattgatgaaatgcctatgaacgttgccgatctcctgggttaa
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