Coccidioides immitis: CIMG_07004
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Entry
CIMG_07004 CDS
T01114
Name
(RefSeq) small nuclear ribonucleoprotein Lsm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cim
Coccidioides immitis
Pathway
cim03018
RNA degradation
cim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CIMG_07004
09123 Folding, sorting and degradation
03018 RNA degradation
CIMG_07004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_07004
03041 Spliceosome [BR:
cim03041
]
CIMG_07004
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CIMG_07004
mRNA degradation factors
5'-3' decay
Lsm complex
CIMG_07004
Spliceosome [BR:
cim03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CIMG_07004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
4561205
NCBI-ProteinID:
XP_001243108
UniProt:
J3K9F3
LinkDB
All DBs
AA seq
98 aa
AA seq
DB search
MSLQPYINKKVLVLTVDGRTLIGTLLSTDQLTNLVLSETVERIIRPPDDPEPSSEVDHGL
YLIRGDNVVICGEIDEEVDGKIDWSKVKGEVIKGTKNY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcagccctatataaacaaaaaggtcctggttctcactgtcgatggccgcacc
ttgataggcacgcttctctccacggaccaactcaccaatctcgtcctgtcggaaacggtg
gagcggataatcaggccgccagatgaccctgaaccgagctcagaagttgaccatggacta
tatctgattcgtggcgacaacgtggtgatatgcggggagattgacgaagaggtagacggg
aagatcgattggtcgaaagtcaaaggcgaggtcatcaagggaacgaagaattattga
DBGET
integrated database retrieval system
