Coccidioides immitis: CIMG_07053
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Entry
CIMG_07053 CDS
T01114
Name
(RefSeq) cell differentiation protein rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cim
Coccidioides immitis
Pathway
cim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIMG_07053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_07053
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CIMG_07053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
4561719
NCBI-ProteinID:
XP_001243157
UniProt:
J3K9J0
LinkDB
All DBs
AA seq
400 aa
AA seq
DB search
MLQAQTQHLFSHQHQYPQADSTWLQHQQHQQHQSHFQQQQQHHSLAAQHAAQAQAQQVAA
AVAQQQQQQQQQQQQQQQQHPHYNRLALSGATSANNPQSAQGGPDSTALGAAANMDSMIS
EENRKVLVWVAELLDPSRRETALMELSKKREQVPELALIIWHSFGVMTSLLQEIISVYPL
LNPSQLTAAASNRVCNALALLQCVASHNETRTLFLNAHIPLFLYPFLNTTSKSRPFEYLR
LTSLGVIGALVKNDSSDVINFLLTTEIIPLCLRIMETGSELSKTVAIFIVQKILLDDIGL
AYICATYERFYAVGSVLSNMVTQLVEQQTVRLLKHVVRCFLRLSDNNRAREALRQCLPEP
LRDATFSSVLRDDAATKRCLAQLLINLSDNVVDTSAGPTM
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggctcagactcaacacctcttctcccatcagcaccagtacccccaggctgat
tccacctggctccagcaccagcaacaccaacagcaccagtcgcacttccaacagcagcag
cagcatcactcccttgcggctcagcatgccgcacaggcacaggctcaacaggtggccgca
gctgtagctcagcaacaacagcaacaacaacagcagcagcaacaacagcagcagcagcac
ccacactacaatcgccttgcgctgagcggtgccacctctgcgaacaatccccaatccgct
cagggcggtcccgatagcaccgccctcggagctgctgcaaacatggacagcatgatcagc
gaggagaatcgcaaggttctcgtgtgggttgctgagctgctggacccgagccggagggag
actgcactcatggagctgagcaagaagagagagcaggtccccgagttggccttgatcata
tggcattcattcggtgttatgacatcgttgctgcaggagataatctccgtctacccgttg
ctgaatccttcccagttgactgccgctgcgtcaaaccgagtctgcaacgcccttgctctc
ttgcagtgtgtcgcctctcacaatgaaacgcggactctttttctgaatgctcatattcca
ctcttcctctacccgtttctcaacaccacctcaaagtcccgcccttttgaataccttcgc
ctcacatccctgggtgtgatcggtgctctggtgaaaaatgattcgtcggatgtcatcaac
ttccttcttacaactgaaatcatccccctctgtctacggatcatggaaaccggatctgag
ctgagcaagaccgtggccatctttatcgttcaaaaaatattgctcgacgatatcggtctc
gcctacatctgtgccacgtacgaacgtttctatgctgtcggctccgtcctgagcaacatg
gtcactcagcttgttgagcaacagacagttagattgctcaagcacgtcgtgcgctgtttc
cttcgacttagcgacaacaaccgggcgagagaagcccttcgtcaatgtctgccggagcca
cttcgtgatgctacattctcctctgttctccgtgacgatgctgccacgaaacgatgcctt
gctcagcttctcatcaacctctccgataacgttgtcgacacgtctgccggtcctaccatg
tag
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