KEGG   Coccidioides immitis: CIMG_07173
Entry
CIMG_07173        CDS       T01114                                 
Name
(RefSeq) Poly(A)+ RNA export protein
  KO
K14298  mRNA export factor
Organism
cim  Coccidioides immitis
Pathway
cim03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CIMG_07173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cim03019]
    CIMG_07173
   03036 Chromosome and associated proteins [BR:cim03036]
    CIMG_07173
Messenger RNA biogenesis [BR:cim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CIMG_07173
Chromosome and associated proteins [BR:cim03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CIMG_07173
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_EML_2 Beta-prop_WDR5 WDR55 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 WD40_Gbeta Beta-prop_WDR90_POC16_2nd EIF3I ANAPC4_WD40 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_RSE1_2nd Beta-prop_ACSF4 Beta-prop_Aladin PilX Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_Nup120_160 Pep3_Vps18 Beta-prop_At4g14310
Other DBs
NCBI-GeneID: 4562245
NCBI-ProteinID: XP_001243277
UniProt: J3K9S2
LinkDB
AA seq 359 aa
MSSALFGSTTSTTGDLSKDVALSSPPEDSISDLAFSSVSDHLAVASWDKKVRIYEINEQG
MSEGKALFEHQGPVLNCCWSPDGTKVVGVGADKAARMLDLAGNPSNPVQVAAHDAPIRCC
RMISNPANSSQPLLVTGSWDKTVKYWDLRQSTPIASLDCQERVYTMDVRNKLLVIGTADR
YINIVNLDQPTKFYKTMQSPLKWQTRVVSCFTDATGFAVGSIEGRCAIQYVEDKDSSSNF
SFKCHRESPSGSTTISNVYSVNSIAFHPTHGTFSTAGSDGTFHFWDKDAKHRLKGFPNVG
GTISCSTFNRNGNIFAYAVSYDWSKGYTGNTPQTPNKVMMHPVAAEEVRPRPSNARRTR
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtcgtcagccctctttggctccaccaccagcacgacaggcgatctctctaaggatgtt
gccctgtcctcgccgccggaggatagcatctccgatctcgcattttcaagtgttagcgac
caccttgcagtggcatcatgggataagaaagtccgtatctacgagatcaacgaacaagga
atgagtgaagggaaagcgctgtttgagcaccagggtcctgttctgaactgctgttggtcg
cctgatggaaccaaggttgtcggtgtcggtgcagataaagccgcccgtatgctcgactta
gctggcaaccccagcaatcctgttcaagtcgcagcgcatgacgcgcctattcgatgctgc
cgcatgatttcaaatccagcaaattcaagccagcctttgctcgtcaccggctcgtgggat
aaaactgtaaagtactgggatctgcgacagtctacgcccattgcgtctctcgattgtcaa
gaacgggtatacacaatggacgttaggaacaagcttctcgtcatcggcacggcagatcga
tatattaatattgtgaatctggaccaacctacaaagttctacaagaccatgcaatcgccc
ctcaagtggcaaacaagagttgtcagctgcttcacggatgctacagggttcgcagttggc
agcattgagggtcgctgtgcgattcagtatgttgaagacaaggattctagctcgaacttc
agtttcaagtgtcaccgcgaaagccccagtggctccacaaccatcagcaacgtctattct
gtcaattccatcgccttccaccccacacacggcacattcagtacggcaggcagcgacgga
acgttccatttttgggataaagatgccaagcacagacttaagggatttccaaatgtcgga
gggacgatttcctgttccaccttcaaccgtaacgggaacatttttgcctatgcagtgagc
tatgactggagcaagggatatactggcaatactccacaaactccgaataaggtcatgatg
catcctgtcgccgcagaagaagtccgacctcgcccttcaaacgcacgcaggaccagatga

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