Coccidioides immitis: CIMG_07689
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Entry
CIMG_07689 CDS
T01114
Name
(RefSeq) translation repressor/antiviral protein Ski3
KO
K12600
superkiller protein 3
Organism
cim
Coccidioides immitis
Pathway
cim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIMG_07689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_07689
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CIMG_07689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_17
TPR_2
TPR_CcmH_CycH
TPR_22
TPR_8
TPR_16
TPR_14
TPR_1
TPR_11
TPR_12
TPR_6
TPR_7
ARM_TT21_N
ARM_TT21_5th
TPR_Slam
DUF3856
ARM_TT21_C
Coatomer_E
TPR_COPA_B
ANAPC3
ARM_TT21
TPR_15
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
4559685
NCBI-ProteinID:
XP_001240526
UniProt:
J3K3X4
LinkDB
All DBs
AA seq
1412 aa
AA seq
DB search
MPAKSALRNIRACLDAGDFAQAAIKATELCEQDPQNYHAHVFLGLALDKLNDADASERAY
INATKLKADDKTAWQGLINLYERLGGKKLDDYASAVIRLCHIFGEADEKSRAQALVEKYI
SSAGKSGTTSQYKQALKLLLPLSPLFNVLEGLIPHPSHTYLRVIELSEAEEKQFINREIG
ERRTRLGAKIDQVTAEVKLEAFRRSDLDELYRGLIDWTHDDAVRREHEEKLLQRGYDYLL
ALPIGKKPEQRNHVIKSANDMVIIHHPFDRAWKIALEWKDVNELSELDVTLLREYIQLFP
DDGLSKVLKGWLASDLSPFPKETDPETQVDQDVSKAGNPADDENQVPGDDPLLLMAEGLV
ESSGSVLSHRIMGEVYLALEEFQSTTEVSRKGLALALDLQRRTGLKLRNTIDSMNTALAT
ALITYQSPKNHPEAKQIFEEILKRNQTSTKCLLGLGLIFEEDQGYDQAVALLEKALQRDP
KNARVRCELFWCRAHCGELQQATRGLEETLTMIQCEQSQYRDLKAVILYRIGQCQWELDP
SPTARKDRNGAYAKFLGSIQSNMNYAPAYTSLGIFYADYKKDQKRAKRCFHKAIELSSSE
TEAAERLARDFANQGDWDLVEAIAQRVVDSGKAKPAPGSRRKGHSWPYAALGVVEINRQQ
YTKSIVSFQTALRISPNDYHCWVGLGESYHNSGRYISAIKSFQHAQALEETLSEADRDHI
WFARYMMANVMRELGDFPEAISRYKEVLNMKPDEFGISIALLQTLTESSWKSVESGVFSD
AAEMAATTIRMGISIAKRHPNSVNLWKAIGDAFSAFSWIENKTALMPVSEFKALLDTRCD
SEGFQILADLDNIGSNVNDLLETPNSNLPTIAAILAYKRALSVSNADVHARAVAWYNLGW
AEYRAHVRRLAEPSKAKKGKHSGFLKASMRCFKRAIELEAGNSEFWNALGIACASLSPKV
AQHSFVRSLHINERSASVWTNLGALYLLNNDFQLANEAFTKAQSADPDLSHAWLGQAILA
FLIGDVAEARELVTHAFTLGNSSFVFPKRQYTTSVFDHLCSSSASSDLSHLIQPLFALHQ
LHTQEPSNLPHDHLSALLAERLGDTAGAKSSLERVCSTVETEYEATESISALSRYSQAKA
DMARAQLAHLEYETAVESAETALSLSNEDGVAEFDTETHKKLRLSAHLTAGLAYYYLKEM
DRAIDMFRDALQEANSSPDVICLLAQVLWAKGGEEERSVAREQLFNCVEQHPDHVGAVTL
LGVIALLDMDEDAIDAVESDLQSMRTNNELSIHDRTKVSKLLAGVSSITSKNEPNVSEEQ
SRIHQASISVMLSPSEPQGWKALALASSEEFPAQMTVLTALGNIPPHGSLGAVDVSRACA
LTGQRQDALKAVMVAPWISDGWEELSHCLIEA
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaaatcagccctgaggaatatcagagcttgtctagatgccggagactttgcg
caagctgccataaaagccacagagctctgcgagcaagatcctcaaaattatcatgcgcac
gtatttctagggcttgcccttgataaactaaatgacgcggatgcatccgagcgtgcgtat
ataaacgctaccaagctcaaggcggatgataaaactgcctggcaaggcttgataaatttg
tacgaaaggctcggaggcaagaagctggatgattatgcatccgctgtgattcgactatgt
catatttttggagaagcagacgaaaagagccgcgcccaggcgttggtggaaaagtatatc
tcttccgctgggaagagtggcactaccagtcaatacaagcaagcactgaagctgctactg
cctttaagcccattgttcaatgttttggaaggcctgattcctcatccttcccacacatat
cttcgagttatcgagctttctgaagcggaagaaaagcaatttatcaaccgggagattggc
gaaagaaggactagattgggtgccaaaattgatcaggtcacagcagaagttaaactcgag
gcttttcgacgtagcgaccttgatgaattgtaccgtggcctcattgactggacccacgat
gacgcagtacggcgagagcatgaagagaagctcctacagcgaggatatgactatctattg
gccctcccaatcggaaagaaacccgaacagcggaaccatgtgataaaatccgccaacgat
atggttatcattcatcacccgtttgaccgtgcatggaaaattgccttggaatggaaagac
gtcaatgagctctctgagctagatgttactctcttaagggaatatattcagttattccca
gacgacgggcttagtaaagtactgaaagggtggttggccagcgatctatccccgtttcct
aaggaaacggatccagaaacccaagtcgatcaggatgtgtcaaaggcaggaaatcccgct
gatgatgaaaaccaggttccaggggatgatccgttgttgttaatggctgaagggctggtg
gaatcttccggttccgtattatcccatcgaataatgggagaagtatatcttgcacttgag
gagttccagtccaccacagaggttagtcggaagggcttagcattggcgctggaccttcag
cgacgtacaggcctaaagcttcgcaatacaatcgattctatgaatacggcacttgcaact
gcacttatcacatatcagtccccgaaaaatcaccctgaggccaagcaaattttcgaagaa
atcttgaagcgaaatcaaacttcgacaaagtgtctcctgggactaggcctcattttcgag
gaagatcagggctatgatcaagccgtagctctgctcgagaaagcattgcagcgcgatccc
aaaaacgctagagttcggtgcgagcttttctggtgcagagcgcattgtggggagcttcaa
caggcgacgagaggtctagaggaaacccttacaatgattcagtgcgagcaatcacagtat
cgtgatctgaaggctgtgatattatatcgaattggacaatgccagtgggagctagaccca
tccccgacagcaaggaaagatcgaaatggagcatatgccaaattccttgggtcaatccaa
tcgaatatgaactatgcaccggcgtataccagtctcggtatattctacgcagattataag
aaagatcagaaaagggcaaaacgctgctttcataaggcaattgaactctcatcgtcggag
accgaagctgcagaacgtctcgcccgggattttgctaaccaaggtgactgggatctcgtc
gaggcaatagcccagagagttgttgattctggaaaggctaagcccgcgccagggtcaagg
aggaaaggtcacagctggccatacgccgccctgggggtggtggagataaatagacagcaa
tataccaaaagcattgtttcgtttcaaaccgctctccgtatatcgcccaacgactatcac
tgctgggttggccttggggagagttaccataattctggccgatatatctctgctatcaaa
tccttccaacacgcccaggcactcgaagagacgctatccgaagctgatagagatcacatt
tggtttgcaaggtacatgatggcgaacgtgatgcgagaacttggagatttcccggaggct
atttctaggtacaaagaagtgctgaacatgaagcctgatgagtttggaatttcaatcgcg
ctactacaaacgctcacagaaagctcttggaaatccgttgaatccggtgtttttagcgac
gctgcagaaatggctgcgacaactatcaggatgggaatttcaattgccaaacgacaccct
aattccgtcaatttgtggaaagcaatcggtgatgcgttctccgcgttctcttggattgag
aataaaactgcattaatgcctgtctcagagtttaaggcgctcttggatacacggtgtgat
tcggagggctttcagatactggcggatctcgataacataggctcgaacgtcaacgatctc
cttgaaacgccgaactcgaatctgccgacgattgcagctatccttgcgtataagcgtgca
ttatcggtctctaatgctgatgttcatgctcgcgcggtcgcatggtacaacctaggttgg
gcagagtaccgtgcacacgtacgtcgcctggccgagccgagcaaggctaaaaagggtaaa
cacagtgggtttctcaaagcctccatgcgctgtttcaagagagcaattgaactcgaggcc
ggaaattctgagttctggaacgcacttggtattgcatgcgcatccttgagtccaaaggtt
gcccagcattcgttcgtcaggagcctgcacatcaacgaaaggagtgcatcagtctggacg
aacttaggtgcattatatcttttgaataacgattttcaactggcaaatgaagcatttacc
aaagctcagtctgcagatcccgacctttcgcatgcttggttaggacaagccattcttgca
ttcttaattggggacgtcgctgaggctcgtgaactcgtcacgcatgcattcactctgggg
aattccagcttcgttttcccaaaacggcaatatacgacctctgtctttgaccacctttgc
tctagctcggcatccagtgatctatcccatctcatccaacctctttttgcgcttcatcaa
ctccacacccaagagccatcaaatctacctcatgatcacctgtccgcccttctagcagag
cgcctcggagacactgccggtgcaaaatcgagcctcgaacgcgtttgctccaccgttgaa
actgaatatgaagccacagaatctatttctgctttatctcgatattcccaggcgaaagca
gatatggcccgtgcgcagttggcccatctagagtatgaaactgctgtggagagtgcagag
actgcccttagtttatcgaacgaagacggtgtagcggagtttgacactgagacacacaaa
aaattgcggctatctgcacacttaacggcagggcttgcgtattattatttaaaggaaatg
gatagagctatcgatatgttccgggacgctttgcaggaagctaacagttctcccgatgtt
atatgtctcctcgcgcaagttttgtgggccaaaggaggtgaagaagaaaggagcgttgct
cgcgagcaattatttaattgcgttgagcaacatcctgaccatgttggagccgttaccctt
cttggtgtgattgcgttactcgacatggatgaggacgctatcgatgcggttgagtctgat
cttcagagcatgaggaccaataatgaactgagcattcatgatcgcacgaaagtatccaaa
cttttggctggtgtctcgagtatcacctccaaaaatgaacctaatgtttcggaggagcaa
agccgaattcatcaagcgagcatttctgtcatgctatcaccgagtgagccgcaaggctgg
aaagcactcgctttggcgtcttcagaggagtttccggctcaaatgactgttctcaccgct
cttggaaacattccaccgcacggctcactcggtgcagtcgatgtctcgagagcatgtgct
cttacaggacagaggcaagatgccctaaaagctgtcatggtggcgccatggatttccgat
ggctgggaggaactgagtcattgtctgattgaagcatag
DBGET
integrated database retrieval system
