Coccidioides immitis: CIMG_07813
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Entry
CIMG_07813 CDS
T01114
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cim
Coccidioides immitis
Pathway
cim03020
RNA polymerase
cim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIMG_07813
09124 Replication and repair
03420 Nucleotide excision repair
CIMG_07813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cim03021
]
CIMG_07813
03400 DNA repair and recombination proteins [BR:
cim03400
]
CIMG_07813
Enzymes [BR:
cim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIMG_07813
Transcription machinery [BR:
cim03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CIMG_07813
DNA repair and recombination proteins [BR:
cim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CIMG_07813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
4560179
NCBI-ProteinID:
XP_001240650
UniProt:
J3K466
LinkDB
All DBs
AA seq
1258 aa
AA seq
DB search
MQEYEDEYGEDGYYEAEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEE
QGQVTLDQTIAPDEDDPDPVMVRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNLT
YASPLYLGITKKIAEGRERSLAERDEDDDEPDAKGDEERRARGTYLQWEPKALPEDEADE
ENIFIGKMPIMLKSKYCILKDLGEHALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNI
VQVFKKAPPSPTPYVAEIRSAVEKGSRILSQLSIKLFAKGDSSKGGFGPTIRSTLPYIKT
DIPIVVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRG
SSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDD
RDHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQLYLNIGVKASTLTGGL
KYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNT
HWGLVCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVLEEFEPQVSPNS
TKIFVNGVWVGVHRDPSHLVSTVQSLRRRNMISHEVSLVWDIRDREFKIFTDAGRVCRPL
FVVDNDPKSENSGSLVLTKEHIHKLEADKEIPADLDPEERRERYYGWDGLVKSGVVEYVD
AEEEETIMIVMSPEDLEVSKQYQAGYIPEEDTSDPNRRVRSKLSQKAHTWTHCEIHPSMI
LGICASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNFDQRMETMANILYYPQKPLATTRS
MEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFYRTYTDSEKMIGL
TVVERFEKPMRSDTLRMKHGTYDKVDDDGIVAPGVRVSGEDIIIGKTAPLAPESEELGQR
TKQHTKLDVSTPLRSTESGIVDQVLVSTSNEDLKFVKVRMRTTKIPQIGDKFASRHGQKG
TIGVTFRQEDMPFTREGIVPDLIINPHAIPSRMTIAHLIECQLSKVSSLRGYEGDATPFT
DVTVDSVSSLLREHGYQSRGFEVMYNGHTGRKLVAQIFLGPTYYQRLRHMVDDKIHARAR
GPTQILTRQPVEGRARDGGLRFGEMERDCMIAHGASAFLKERLFDVSDPFRVHICDICGL
MTPIAKLKKGDFECRACKNKNKISQVHIPYAAKLLFQELMSMNIAARMYTKRSGVTLR
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatacgaggacgaatatggcgaagatggctactacgaggctgaggaaggaatc
acttccgaggactgctggaccgtcatctcttccttcttcgaatcgaagggtctcgtctcc
cagcagctcgattctttcgatgaattcatttcaacgacgatgcaggaacttgtggaggag
cagggacaggtaacacttgaccagacaatagcccccgatgaagacgatccagatccggtt
atggtgcgacgttacgagctcaagttcggtaccgtgatgcttgcgcggccgtcgatgaca
gagggtgatggagcgacaagtatcatgttgcctcaagaagcgcgccttcggaatttgaca
tacgctagccctctttatcttggaatcacaaagaaaattgcagagggccgagaacgatcg
ctggccgaacgcgacgaagatgacgatgaacccgacgcgaaaggcgacgaggagagacgg
gctagagggacatatctacaatgggagcccaaggcgcttcctgaagatgaagctgatgag
gagaatattttcattggaaagatgccgattatgttgaagtctaaatactgtattctcaaa
gaccttggcgagcatgcgctgtacaactggaacgaatgcccctacgactctggcggttac
ttcatcatcaacggcagtgaaaaagtccttattgctcaagagcgaagtgctggaaatatc
gtgcaggtcttcaagaaagctcctccaagccctactccctacgtcgcggaaattcgaagt
gctgtcgaaaaaggctcccgtatcctctcccaattatctatcaagcttttcgccaaaggt
gatagttcgaagggaggctttggtcctactatccgttccacgctgccctacataaaaacc
gacattcctatcgtcgtcgtctttagagccctaggcgtcgtttccgatgaagatattctc
aatcatatttgctatgaccgcaacgatacccctatgctagaaatgctaaagccttgtatt
gaagaaggttttgttattcaggaccgtgaggttgctctcgacttcattagtaagcgaggc
tcttctcccacgagcatgaaccatgagaagcgtgtgagatacgcaagagatatcatccag
aaagaattcctgcctcatatttcccaaagtgaaggaagcgagacacgaaaggccttcttc
ctaggttacatggtacacaaattactacagtgtgcccttggccgacgggatgtggatgat
cgtgaccactttggcaaaaagcggcttgatctagccggaccattacttgccaaccttttc
cgggtcctttttatgagacttacaaaggatctctacaaatacgtccagagatgcgtcgag
acaaatcgccaactttatttgaacattggcgtcaaggccagcactttgactggcggtcta
aaatacgctcttgctaccggaaattggggtgagcagaaaaaggcagcaagttcaaaggcc
ggtgtttctcaggtgcttaaccgctacacttatgcctctacgctatcgcatcttcggcga
accaacacgccaatcggccgtgatggaaagatcgccaaacctcgtcagcttcacaatact
cactggggtttggtttgtcctgcggaaactccggaaggtcaggcttgtggtttggttaag
aacttggctctgatgtgctatattacagtcggcacgcctagtgagcctatcattgacttc
atgatccagcggaacatggaggttctggaagagtttgaacctcaagtgtcgcccaattcc
acaaagatcttcgtcaatggcgtctgggttggagtccacagagatccatcgcatctcgtg
agcacagttcaatcgctgcgtcggcggaacatgatttcgcacgaggtcagtttggtatgg
gatatccgtgatcgggaattcaagattttcactgatgcgggtcgtgtttgtcgaccgctt
ttcgttgtggacaatgatccaaagagcgaaaatagtggatctcttgtgcttaccaaggaa
catattcacaaacttgaagcagacaaggaaatacctgcggatctggatccggaggagcgt
agggagcggtattatggttgggatggacttgtcaagtctggtgtcgtcgaatacgtggac
gcagaggaagaagagacaatcatgattgtcatgagtcctgaagacctggaagtctccaaa
caataccaggctggatatatccccgaggaggatacatcagatcctaaccggcgtgtcagg
tcgaaactcagccagaaagcacacacttggactcactgtgaaatccatcctagcatgatc
ttgggtatctgcgccagtatcattcccttccccgaccacaaccaatctccgcgtaataca
taccaatctgctatgggtaaacaagctatgggtgtcttccttaccaacttcgatcaaaga
atggaaacgatggcgaacattctctactacccccagaaacctctggcaacgacaaggtcg
atggagttcctgaagttccgagagcttcctgccggccagaacgctattgttgctattgcg
tgttactctgggtataatcaagaagactctgtcatcatgaaccagagcagtattgaccgt
ggtcttttccgaagtctgttctaccggacgtacaccgactctgaaaagatgatcggctta
acggtggtggagagattcgaaaagcccatgagatcagatacgctacgcatgaagcatggc
acatatgacaaggtcgatgacgacggtattgtggcgcccggtgtccgtgtttccggtgag
gatatcatcattggaaagaccgcgccattagcaccagagtcggaggaactgggtcagaga
acgaagcagcataccaagttggacgtttctacgccgctacgaagcaccgaaagcggtatc
gttgatcaggtgctagtctccaccagcaacgaggatctgaagttcgtgaaggtgcggatg
agaactaccaagatcccacagattggtgataaatttgcgtctcgtcacggtcaaaagggt
actatcggcgtgacattccgccaggaagacatgccgtttactagggagggtattgtccct
gacttgatcatcaacccccacgccattccgtctcgtatgaccattgcccacttgatcgag
tgtcagcttagtaaggtgtcttcgctacgtgggtatgaaggagatgcgacgccgttcacg
gacgtgactgtcgactcggtatccagcttgctccgggagcatggttatcaatcacgtgga
ttcgaagtgatgtacaatggccacacgggaagaaagctggtcgcccagattttcttgggg
ccgacatactaccagcgtctgcggcatatggtggatgacaagatccatgcacgagcgcgg
ggtcccactcagattttgacgagacagcctgtcgaaggtcgtgcacgagacggcgggctt
cgattcggagaaatggaacgcgattgcatgatagctcatggtgccagcgcattcttgaag
gagaggctgttcgatgtgtccgatccgttccgtgtacacatttgcgacatctgtgggttg
atgacaccaattgccaaactcaagaagggcgacttcgagtgccgagcttgcaaaaacaag
aacaagatctcgcaagttcacataccttatgccgctaagctgctcttccaggagctgatg
tcgatgaatatcgcggcacgaatgtatacaaagcgatcaggagtgacattgcgctag
DBGET
integrated database retrieval system
