Coccidioides immitis: CIMG_07894
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Entry
CIMG_07894 CDS
T01114
Name
(RefSeq) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cim
Coccidioides immitis
Pathway
cim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CIMG_07894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cim03041
]
CIMG_07894
03009 Ribosome biogenesis [BR:
cim03009
]
CIMG_07894
Enzymes [BR:
cim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CIMG_07894
Spliceosome [BR:
cim03041
]
Complex A
U1 snRNP components
U1 related factors
CIMG_07894
Complex B
CIMG_07894
Ribosome biogenesis [BR:
cim03009
]
Eukaryotic type
Pre-60S particles
Helicases
CIMG_07894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2443
Utp25_C
Motif
Other DBs
NCBI-GeneID:
4559783
NCBI-ProteinID:
XP_001240731
UniProt:
Q1DP69
LinkDB
All DBs
AA seq
545 aa
AA seq
DB search
MSYGGGYSSSRDHYGGGHHSGGSGYRSGGYGGSNGYSHGNSNGYGSYGGNSHGSGVGSHG
GGHHGDRMSNLGSGLKQQEWDLNALPKFEKHFYKEHPNVTNRSAQDVEAFRKEHEMTVYG
KNVPRPVETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTL
TYCLPAIVHINAQPLLGPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVP
RGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKII
GQIRPDRQTCMWSATWPKEVRQLAHDFLHDYIQVYIGSQDLSANHRITQIVEIVSDFEKR
DRMINHLERIMDDKKSKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNE
FKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFT
TDNAKQARDLVNILTESKQQIDPRLAEMARFGGGGGGGGRWGGRGRGRGGFTASNAAPLG
HNRRW
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggaggaggttattcctcatctcgcgaccattacggtggcggccatcattct
ggtggaagtggttacagaagcggtggctacggtggaagcaatggatattctcatggtaat
tcgaatggctatggatcctatggtggcaactcccacggtagtggtgtcggctcacatgga
ggcggccatcacggtgaccggatgtccaatctcggttctggtttgaagcaacaagaatgg
gatttgaacgccctgcctaagttcgagaagcacttctacaaggaacaccccaacgtgact
aatcgctccgcacaagacgtggaagctttccgaaaagaacatgaaatgactgtctatgga
aagaatgttcctcgccccgttgaaacatttgacgaagccggcttcccccaatatgtgatc
tctgaagttaaggctcagggattcgctaaacccacacccatccaatctcaaggttggcct
atggccttgtctgggcgcgacgttgttggtattgcagaaaccgggtcgggaaaaactttg
acatattgcttgcctgccatcgtccacatcaatgctcagcctctgctcggccctggcgat
ggaccaattgtacttgttctggcgccaactcgcgagttggccgttcaaatccaagccgaa
attacaaagttcggaaagtcttcacgcattcgaaacacctgcgtctacggaggtgtccca
agaggacctcaaattcgcgatctttcccgcggtgtcgaagtctgtatcgccactcctggt
cgtttgattgatatgcttgaagcgggaaagacaaaccttcgtcgggttacttacctcgtt
ctcgatgaagcagatcgcatgcttgatatgggtttcgagccccaaattcggaagattatc
gggcaaattcgtcctgatagacaaacttgcatgtggtcggctacctggccaaaggaagtc
cgacagcttgctcatgactttctccacgattatatccaagtatatattggatcccaagac
ctctcggctaaccataggatcacccaaatcgttgagattgtgtcggatttcgaaaagcgt
gatcgcatgatcaaccatctcgaacgtatcatggatgacaagaagtccaagatcctcatc
ttcactggcacaaaacgtgtggcagatgatattacccgattcctccgtcaagatggatgg
ccagctttgtctatccatggtgataagcaacagaatgagcgtgattgggttctaaatgaa
ttcaaaactggcaaaagcccgatcatggtagccactgacgtggcttcgcgtggtattgat
gtgcgcgacattactcatgtgttgaactatgactatccgaacaattcggaagattatgtt
catcggattggtcgtactggccgtgccggtgctaagggaacggctattacgctgttcacc
actgacaatgctaaacaggctcgtgatttggtcaatattctcaccgagtccaagcagcag
attgatccacgccttgcagagatggcccgctttggcggcggcggtggaggcggcggccgc
tggggtggtcgcggccgtggccgtggaggttttaccgcctcaaatgctgcccctctcggc
cataatcgccgctggtag
DBGET
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