KEGG   Coccidioides immitis: CIMG_08063
Entry
CIMG_08063        CDS       T01114                                 
Name
(RefSeq) small nucleolar ribonucleoprotein complex subunit
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
cim  Coccidioides immitis
Pathway
cim03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CIMG_08063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cim03009]
    CIMG_08063
Ribosome biogenesis [BR:cim03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    CIMG_08063
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40 WDR55 WD40_WDHD1_1st Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_RIG_2nd PD40 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_DCAF4 PQQ_2 Beta-prop_NWD2_C Beta-prop_EMC1_N Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 4559327
NCBI-ProteinID: XP_001240900
UniProt: J3K4R0
LinkDB
AA seq 1025 aa
MKVKKNSIWCLHRLVLTPPVFSQLSMDIHRCRFVPYNPQAINALAFSHPPSTELQGRGVP
TLRLAIGRANGDIELWNPSKGTWFQETILRGGKDRSIEGLAWTVDPSEKDSEGNDLPGKL
RLFSIGYSSVVTEWDLEKGRPARHSSGNYGEIWCLAAQLRWESRNKKKDGKQLPPAEGEY
MGQHLAVGCADGAIVILSTADGDLKYLRTMRPSTKKSRVLNITFQNRNTIVAAYADSSIR
IFDIRSGKLLRTVTLGKGPNKAVKELLVWSVKCLPDGTIVSGDSAGEVRFWDSKNYSLIQ
RIQSHQADVLDIAVSADGESVVSAGADQRTAVYRRKAPEKGAKTRRWVEVMHRRYHTHDV
KALAVYETKDISVFVSGGLDTVPVVVPLRSIGKELHRKLPSLPQSPPLSSSPSSRLLMGW
WDREVNIWRVSQPSKSLESQQHRLVAKVLFQGEENLTSAALSSDGKLLVAASVSQIKAFC
LSPREDGDKPGLQVNKLEIPFEISKCGAKEIAISPDGKWLCFVRSDNVICMARIDIDPEI
PGRPQILPGISKLRRAQRNVQRGKLHHGSLGAYDRTIRCIAFSSDSNIVACGDLAGFVDA
WVLENKSNLLTNGQIPEKAADSELSDDDSSDEEAGSTNTYGQRWIVPRFDSPIPRLKSGV
LLMTFRPSYGSQSKHLTNGVTSNSSPSHNLSTGDDRLVVLTTEHHISEFNVLEGKLTGWS
RRNPKSYLPKDFTIVKDRAMGALWDKKGTSERLWLYGPSWLWMFDLAQDFPAPAEPDNEE
KAVAALNNDSTTEASPSKKRKRGETKESKIRQPNSGAGDRVPYWQDNIGLGRKMRKVIGD
DGETAQWIPIDLKKPADPAQMGDEAADHYEEPSKSILAEFRREPQGDGPGSEEENGEWQQ
QQQLDEGTSAIRPQSSSNLPNEASEANDHDVEGTTADLQVQEVPGSESKAESRTKHRRSR
NPRRWWHTFKYREILGIVPLGQGFTAGDAVGASWANEGMGGLEVAVVERPMWDVALPGRY
VRDYE
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgaaagtcaaaaaaaattcaatatggtgtctccatcggttagtactgacacctcccgtt
ttctcccagctaagcatggacatccaccggtgtcgcttcgtgccatacaacccgcaggcg
atcaacgcgctcgcgttctcacacccaccatcaacggagctgcaaggtcgtggagtcccg
acgttgcgactggcgattggccgtgccaacggtgacatcgagctctggaatccaagtaaa
ggaacttggttccaagagaccattctgcgcggtgggaaggaccggagcatcgaaggtctt
gcgtggacggttgacccgagcgagaaggattccgagggcaatgatctccccggtaaacta
cggctctttagcatcgggtattccagcgttgtgacggaatgggaccttgagaagggtcgc
ccggcgagacattcgagcgggaattatggcgaaatttggtgtttggcagcgcagcttaga
tgggagtcgagaaacaagaaaaaagatgggaaacagttgcctccggcggagggagagtat
atgggacagcatcttgcagtgggatgtgcggatggggcaattgtaatattgtctactgct
gatggggaccttaaatatctccgcacgatgaggccttcgaccaaaaagtcgcgtgttctt
aatatcacctttcagaaccggaataccatcgtcgccgcctatgccgatagctccattcgg
atattcgatatccgcagcggcaaactccttcgcaccgtcactctcgggaagggaccaaac
aaggcagtgaaagagcttctagtctggtccgtgaaatgcttaccggacggaacaattgta
tcgggcgattctgctggtgaagtgcgtttttgggactctaagaattattctttaattcaa
cggatacagagccatcaggcagacgtgcttgacatcgctgttagtgcggacggggaatcg
gtcgtcagtgctggcgcagatcaacgaacggccgtttacagacggaaggctcccgagaaa
ggagcgaaaactaggcgctgggttgaagtcatgcaccgtcgataccatacccatgacgtc
aaagcactcgcggtctacgaaacgaaggacatcagtgttttcgtctccggaggtctggac
accgtgccggttgtggttccgctacgaagtatcggaaaggagctacatagaaaactcccg
agccttcctcaatcaccacccctatcatcatccccatcatcgcgcctgctaatgggctgg
tgggatcgcgaagtcaacatatggcgtgtgtcccagccgtccaaatcgctcgaatcccaa
caacaccgactcgttgcaaaagttctctttcagggtgaagagaatctaacttctgcggcc
ctttcatccgatgggaaacttcttgtggcagcctccgtctcgcaaatcaaagctttctgc
ttatctcccagagaagacggggacaaaccaggcctccaggtcaataaactcgagattcct
ttcgagatttcaaaatgcggagcgaaggagatagcgatttcgccagatggcaaatggctc
tgctttgtacgatcagataacgttatttgtatggccaggatcgacatcgatccagaaatc
ccgggccgtcctcagatacttcctggaataagcaaactgcgtcgcgcacagcgaaatgtg
cagcgtggaaaactacaccatggatcccttggtgcgtacgaccggacaatacggtgtatt
gccttctccagtgacagtaatattgtggcatgcggtgatcttgcaggctttgtggatgca
tgggtgttagaaaacaagtcaaacttgttgacaaacggtcaaattcccgaaaaggctgcc
gattctgagctatctgatgatgattcttccgacgaagaggccggcagtacaaatacctac
ggccaacgctggattgttcctcgttttgactcgcctataccccggcttaagtcgggagtc
ctattaatgacgttccgcccttcatatggatcgcagtccaaacatctcacaaatggtgtc
acatccaacagctctccttctcacaacctctccaccggtgatgatagattagtggttttg
accaccgaacatcacatctccgaattcaatgtactcgagggcaaacttacaggttggtct
cgaagaaaccctaaatcatatctaccaaaggatttcactatcgtcaaggacagggctatg
ggagcactttgggataaaaaggggaccagcgaacgtctatggttatatggaccgagctgg
ctttggatgtttgacttagcacaggacttccccgcccctgcggaacccgacaacgaagag
aaagccgttgcagcattaaataacgatagcacgactgaggcctccccatcaaagaagcga
aagagaggagagaccaaggagagcaaaataagacagcccaactccggcgctggagataga
gtgccttattggcaggataatatcggcctaggaagaaaaatgcgcaaggtgatcggggac
gatggagaaacagctcagtggataccgattgacctgaagaagcctgccgacccagcccag
atgggtgacgaagcagccgatcactatgaggagcctagcaaatccatcctagccgaattt
cggcgggagccacagggcgatgggccgggctcggaagaggaaaatggtgagtggcagcag
cagcagcagcttgatgaaggaacgtcggccattaggccccaatcctcctccaacttgcct
aatgaagcatccgaagcgaacgaccatgatgtcgaaggaacgacggcggaccttcaagtg
caggaagtacccggatcagagtcgaaagcagagtctagaacgaaacatcgccgcagtcgt
aaccctcgccggtggtggcatacgttcaaatatcgtgagatactcgggatcgtgccgttg
ggtcaaggattcaccgctggagacgcggttggggcttcatgggccaatgagggaatgggg
ggactggaggtcgcagtagttgagcggccgatgtgggatgtggcgctgcctggacgatat
gttagagactacgaatga

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