Coccidioides immitis: CIMG_08170
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Entry
CIMG_08170 CDS
T01114
Name
(RefSeq) non-repetitive nucleoporin
KO
K14312
nuclear pore complex protein Nup155
Organism
cim
Coccidioides immitis
Pathway
cim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CIMG_08170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_08170
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CIMG_08170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
DUF7234
Motif
Other DBs
NCBI-GeneID:
4560510
NCBI-ProteinID:
XP_001241007
UniProt:
J3K4Z2
LinkDB
All DBs
AA seq
1359 aa
AA seq
DB search
MSFPPLTPAKPVPGTYFQTPAPSLANGGLYQNRMLSSAAARPSSAGSTLAQTIGAKAVSS
TKSKAETMSPRERGARTIDDALAQDSRYPDLDSYLSQGFSSHYDIPTSSPWAPFQKIKMY
NIPDQIFDQYNRAQVSTSMGLFAELNLAWVTIDNALYLWNYTHQNPQLIGFEDQPNSINT
VKLARPRKGVFLSSITYVIVIATTADVILLGLGCEGAGQTNIVTLYQTGMSTSIRGLDIN
VIASSDSTGRIFFAGSTDNDVYELKYQQEERWFQGRCTKVNHTTKSFAAFAPQFTLTHKP
QNFVEQMLVDDSRNLLYTLSSNSSIRVFHLKQDGTLSLAITKNAVDIYSNIGHIIGSNET
LNARVKIVSISPIPVEEASRYHLMATTATGYRIYLSATGSYSWSATPSPTNAPTSMQAQH
VKTPPPDTPMLQPMQGASPISGPQYQATASARLPIQSLNPTRSAERYPPGYFFCFTARDP
LNRVDTLFISTPDSGRLARPQETSIPLKPGETGLWLTLGSRAEDIGLCTPGLGAQGTPGF
GNELAVQFDQPAAEIAILTNTGVHVIRRRRLVDIFASLIRSSGGEEGLENQVKTLIRLYG
RSEVLATALAVACGQGVELSQDSRLSKINDPDVLEFARKVFIEFGGKPSLDENAVTDGSA
LAIDAVIPSPRHVGIALYTSRLLRSIWKTVIVKQERTPAGGTSIVPSVSTSKLHSIQRDL
SALQEFFRVNKSFIEGLSGPEALSRAATKQEEISLQAEHRALHSLVQLISHTIEGISFIL
VLFDERVEDTVALLPDVSKSRFLTLTFEQLFSSSQGHDVAKELVKAIVNRNIAKGSNVET
VAEALRRRCGSFCSAEDVLIFKAQEQLKRAAEAGVNSEFGRNLLNESLNLFMQVSETLPM
DYLQSAVDQYIQNQFYAGAIQLCLSVAADSDRANRAQSWLMDGRPAQDPRQASYETRKQC
YELIYNVIMAVDDLASKEPEIVDGQYTAVNRRKNEAYDVITSSQDEVFLTSLYDWYLERG
WSERLLQIQTPFVAIYLKRKSTEDIFHADLLWRYYGQSSRFYDAAAVQLQLAQSPFALPL
SRRIEYLGQASANASTFTHDVSRASRQRLQQEISGLLDVANVQDDLLQRLKDDTRIAAER
KDEVLKEVGGEIMELSTLFNIYADPGGYYDICLQIMYLANYRNTSDIKAAWENLIKDVHD
EASEKGTPLPYEAVIEKVRSLAHRLRMSEITFPVPILLPMLERYVLERQLGVGPQTWVID
LFLDLQVAHETLYTILESMFYNDEVPFQGRNRMYIGNDLVYLISRWYQETVRIGGGVFGS
DVLASRVSELLLLVQQSGGDREIAEVCRDLRMRIEQSLR
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgagctttccacctctcacaccagctaaaccagtgccaggcacatattttcagacgcca
gcgccatcgcttgccaatggaggcctatatcagaatagaatgctatcctccgcggctgct
cgcccttcctccgcgggaagtactttggcccaaacaatcggcgccaaagcagtttcgagt
actaaaagcaaggccgagactatgagtccacgagaacggggagcccgtacgatagacgac
gccttagcgcaggattcgcggtatcctgatttagatagctatctttcccagggattcagt
tcacattatgatatacccacctcatcaccatgggcgccctttcagaaaataaaaatgtac
aatattcccgaccagatatttgatcaatataatcgagcacaagtatcgacgagcatgggg
ctttttgcggagttgaatctcgcatgggtgacgatcgacaacgcgctttatctatggaac
tacacgcatcaaaacccccagttaattggcttcgaggaccaaccgaatagcattaacacc
gtaaagcttgcgcgcccacgaaaaggagtattcctatcgtcgataacatatgtcatcgtc
attgcgaccacggccgatgtcatactccttggtttggggtgcgaaggggccggacaaaca
aacattgtcacgctttaccaaactggaatgtcgacgtcaatacgtggactcgatattaac
gtgattgcatcctcagactcgacaggcaggatctttttcgccggttctacagacaacgat
gtctacgagctcaagtatcagcaagaggagcgctggtttcaagggaggtgtacaaaggtg
aaccatacgacgaagagctttgcagcttttgctcctcagttcaccttgacgcataagcct
cagaatttcgtggagcagatgctagttgatgatagcaggaatctcctatatacactctcg
tcgaactcctcaattcgagtattccatttaaagcaagatggaactctcagtctggcaatt
acgaaaaacgccgttgatatctactcgaatattggccacataatcggcagcaacgagacg
ctcaacgctcgagtcaagatcgtgtcgattagccctattcctgtcgaggaagcctcaagg
taccatcttatggcgacaacagcaacaggatacaggatctatcttagtgctaccggctcc
tatagttggtccgcaacgcctagtccgaccaacgcacctaccagcatgcaagcacaacat
gtgaaaaccccccctcccgatacacccatgcttcagcctatgcagggcgcttctccgata
tcaggaccccaataccaggcgacagcaagcgctcgactcccaatacagtcactgaatccc
acccggtcggccgagcgctatcctccgggatacttcttctgcttcactgcgagagatccc
ctcaatcgggtagatacgctctttatatcaacgccagattctggtcgactcgcccgccca
caggagacatccattccacttaaaccaggtgaaactggactctggctaaccttgggcagt
cgggctgaggatattgggctatgtacacctggactcggcgctcaagggactcctggcttt
ggaaacgagcttgcggttcagtttgatcagccggccgccgagattgcgatcctaacgaat
accggagtccatgttatccgccgacgaagactcgttgatatttttgcatctcttatccgc
agttcaggcggcgaagagggacttgaaaaccaagtaaaaacgcttattagactttacggc
cgaagcgaggtgcttgcaacggcgctggcagttgcatgtggtcaaggtgttgagctttca
caagactctcgcttgtcgaagataaacgatcccgacgtgctagaattcgcacggaaagtt
ttcattgagtttggtgggaaaccttctttggatgaaaatgcggtgactgacgggtctgct
ctcgcaatcgatgcggttataccatcacctcggcatgtaggcattgctctttacacctcg
agacttctgaggtcaatctggaagactgtcattgtgaaacaagagcgtacgccggccggt
ggaacttccattgtcccatccgtgagcacatcaaagttgcattcaattcagcgggatctt
tcggcgctgcaggagttcttccgtgtcaataagtctttcattgagggcctaagcggcccc
gaagcgctgtcacgagcggctacaaagcaagaagaaatttctttgcaagcagagcaccgt
gctcttcactcacttgttcagttaatctcacacaccattgaaggaatatcgtttattctg
gttcttttcgacgaacgcgtcgaagataccgtagcgctgctgcccgatgtgtccaaatcg
aggttcttgactctgacattcgaacaactctttagcagctctcaaggccatgatgttgca
aaggaactggtcaaagcaattgtgaaccgcaacattgcgaaaggctcaaacgtggaaacc
gttgcagaggcccttcggcgacgatgcggctcgttctgcagtgcggaagatgttctaatt
ttcaaggctcaggagcagctgaagcgagcggcagaagctggtgttaattctgagtttggt
agaaatctgctgaacgaaagtttgaatctgttcatgcaggtctctgagaccttaccaatg
gattatcttcaatctgcggttgatcaatatattcaaaatcaattttatgctggtgcaatc
caactatgtttaagcgtcgcggccgattcagatcgagcgaatcgtgcacagtcatggctt
atggacggtcgacctgctcaggacccccgccaagccagttatgaaacgaggaagcaatgt
tatgaactaatctacaatgttattatggcagttgatgaccttgcgagcaaagaacccgaa
attgtcgatggacaatatactgccgtcaacagaaggaaaaatgaggcttatgatgttatc
acgagctcacaagacgaggtcttcctcacgagtctttatgattggtatcttgaacgcggt
tggagcgaaaggctgctgcagatacagactccgtttgtcgctatctatctcaagagaaag
tcaactgaagacatcttccacgcggacttgctgtggagatactacggacaatctagtcgg
ttttacgacgctgctgctgtccaactgcaactcgctcagagcccattcgcccttcccttg
agccgacggattgagtatcttggtcaagcaagtgccaatgcctcaacttttacacacgac
gtctcccgtgcttctcgacagagattacagcaagaaatttcgggccttctcgacgtggcg
aacgttcaggacgatttacttcagcgtctcaaagatgatacaagaatagctgctgaaaga
aaggacgaggttcttaaggaagttgggggtgaaatcatggagctcagcactctattcaac
atctacgctgaccctggtggttattatgacatctgtctacaaataatgtaccttgctaat
tacagaaacacttccgatatcaaagcggcgtgggagaacttgattaaggatgttcatgat
gaagcatcagagaagggcacgcctctcccatacgaagcggtcattgagaaagtccgctcc
cttgcccatcgtttgaggatgtcagaaatcacattccccgtcccaattctattgccaatg
cttgagagatacgttctcgaacgccaacttggcgtaggaccccaaacatgggtaattgat
ctattcctcgatctccaggttgcgcatgaaacgctctatacaatattggagtcgatgttc
tacaatgatgaggtgccattccagggccgcaaccgtatgtatattggcaatgatcttgtt
taccttatctcgcgatggtatcaagaaacagttagaattggtggcggtgtttttggtagt
gacgtgctcgcaagtcgtgtctccgagttgttactgttggtgcagcaaagcggaggagac
agggagattgcagaagtttgcagggacttgcgaatgaggattgaacaatcattacgataa
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