Coccidioides immitis: CIMG_08982
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Entry
CIMG_08982 CDS
T01114
Name
(RefSeq) nucleoporin
KO
K14308
nuclear pore complex protein Nup54
Organism
cim
Coccidioides immitis
Pathway
cim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CIMG_08982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_08982
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CIMG_08982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_57_C
Nucleoporin_FG
PilJ
YscO-like
DUF7801
Motif
Other DBs
NCBI-GeneID:
4558662
NCBI-ProteinID:
XP_001239361
UniProt:
J3K1D5
LinkDB
All DBs
AA seq
463 aa
AA seq
DB search
MSLFGAQKPSPFGSGLTTGQSQQGGGLFGGSQQQQQQSTSPFGTLGVQSKPGGLFGGVGQ
QQSSSPFSAFGSGTQQPQQQAGGLFSGLGSSTQQQPQQQTQQTGSLFTGLGSSTQQQPQQ
QTGSLFGVVGSQPQQQPSQGGGGLFSAFGSTSQQPPQQAGSLFSGLGQKQPPFGSTLGGV
GQPQAQSQLGQTLGQSQAPGSTIWTPGQGMTGVHRTVPMQMMIVKDKWDPIHRASPFRSY
LYNYASDETAPFFQPGPIDDENKWEDALRKRPGPAYVPVLVRGFWELGKRAQRQRDFLTM
IQTRLHEINNALTELLSRHDLTISVRIAACRRKHQVLSQRCLALASKTQLLRNRGYAMDE
AEEELSKKLLQLERSMFDPTLNGRSEEIWARMLAIRENTKRLQMEIERTGKGAAQQEDDT
LSDAQLKAAKKILDDYASQIQHLNKELAAIQKDYEDLEKSSIS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatttggcgctcagaaacctagtccgtttgggtctggtttaacaacaggccaa
tcccagcagggtggaggtctttttggtggctcacaacaacagcagcagcaaagcacctcg
ccgtttggaacattgggagtgcagtcaaaacccggcggcctgtttggtggtgtaggccag
caacaaagcagcagtcctttctctgcatttggttccggcacgcagcagccccaacaacaa
gctggcggtctcttctctgggctcggaagttcaacccagcaacagccccagcagcaaacg
cagcaaactggtagtctttttactgggctaggcagttctacccagcaacaaccacaacaa
caaaccggtagtctttttggagttgtaggctcccaacctcagcagcaaccatcgcagggt
ggaggtggcctcttctctgcctttggctcgacttctcaacaaccgccacaacaggctggt
agcctattttcaggtcttggtcagaagcaaccgccgtttgggtcaacacttggtggcgtt
gggcaaccgcaagcacaatctcaattgggtcagacgctaggacaatctcaggctcctggt
tcgaccatatggacacccggccaagggatgactggtgtccatcgaactgttccgatgcaa
atgatgatcgtcaaagataaatgggacccaatacaccgagcctctccatttcgttcctac
ctgtacaattatgcgagcgacgagactgcgccgttcttccaaccaggtccaatcgatgat
gagaataaatgggaagacgctctgcggaagcgtcctgggcccgcgtacgtcccagttctc
gtaaggggcttttgggaacttgggaaacgggcccagcgacaacgagactttttgaccatg
atacaaacaaggctacatgaaatcaacaatgcccttaccgaactactatcccgtcatgac
cttacgatttcagtcaggatcgctgcatgtaggaggaaacatcaagtgttgagccaaaga
tgtctcgcgttggcctcaaaaacgcagttgcttaggaatcgtggatatgccatggatgaa
gcggaagaagagctgtcaaagaaactgctccagcttgaacgctctatgtttgatccaact
ctaaatgggagatccgaagaaatttgggcgaggatgcttgcaatcagagaaaatacaaaa
cgtctacaaatggagattgaacgaacaggcaagggagcggcacaacaagaagatgacact
ttgagcgatgcgcagctgaaggcggccaaaaagattttggatgattatgcgtcacaaata
caacacctaaataaagaacttgccgcgattcagaaagattatgaggacctggagaaatct
agcatatcttaa
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