Coccidioides immitis: CIMG_09023
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Entry
CIMG_09023 CDS
T01114
Name
(RefSeq) nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cim
Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_09023
03041 Spliceosome [BR:
cim03041
]
CIMG_09023
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CIMG_09023
Spliceosome [BR:
cim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CIMG_09023
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_MUD2_C
RRM_occluded
RRM_10
RRM_7
RRM_8
RBD_AKAP-17A
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
4558341
NCBI-ProteinID:
XP_001239402
UniProt:
J3K1G9
LinkDB
All DBs
AA seq
466 aa
AA seq
DB search
MADNAPPATSSSLPPPPQAPAGAPGQQQLDKAQGNGQGNPSHMPPPPLPPVVIPQNTNPI
PTAITSPMSGNMMSPTSAGGYVRRAAPEPNKRALYVGGLDPRVTEDILRQIFETTGHVQS
VKIIPDKNFQSKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNANKEDT
SNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEK
ALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDM
VVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAM
AICQLNGYNVNGRPLKCSWGKDRPPTGQFDYSPQQGANPAFNSGPNPAGRGWDQSGANFG
PGMPGQGYGQVPGGAAGYGRGQNNPGSGWAQPNAGNFGNGFGGYQA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacgccccaccagccacctcttcgtccctccctcctcctccacaggcacct
gcaggcgctcccggccagcagcagttggacaaggctcaggggaacggccagggaaaccct
tcacacatgccacctccgccgctgccgcccgtcgtcatcccccaaaacaccaacccaatc
cctactgccatcacctctcccatgtctggcaacatgatgtcaccgaccagcgctggtggc
tacgtgcgtcgagccgctcccgagccaaacaagcgtgccttgtatgttggtggtctcgac
ccacgtgtgaccgaggatatcctgcgacagatttttgaaacaactggccacgtccagagt
gtgaagattatccccgacaagaatttccagagcaagggattgaactacggctttgttgag
tacgacgatccaggtgccgcagaacgcgcaatgcagactctcaacggccgtcgcgtccac
cagtcggaaatccgtgtcaactgggcttatcagtcgaacaacgcgaacaaggaggacacc
tccaaccacttccacatatttgttggcgatctgagtaatgaagtgaacgacgaagttctg
cttcaggccttctctgcctttggctctgtctccgaggcccgtgttatgtgggatatgaag
accggtcgctcccgtggttacggtttcgtcgctttccgcgaacgtgctgatgctgaaaag
gccttgagctccatggatggtgaatggttgggttctcgtgcgattcgctgcaactgggcc
aaccagaagggtcagccttcgatttctcagcagcaggccatggccgcaatgggcatgacg
ccgaccactcctttcggccatcatcatttccccacacacggtgtccagagctatgacatg
gtcgtccagcaaacccctcagtggcagactacgtgctacgtcggaaatctgaccccttac
accactcagaacgaccttgttccgttgttccagaactttggctacgtcgtcgaaactcga
ttccaggccgatcggggatttgcatttgtcaagatggatactcatgagaatgctgccatg
gccatctgccagctcaacggctacaacgtcaatgggcgaccgctgaagtgcagttggggt
aaagaccgccctccaactggccaatttgactattctcctcagcaaggtgctaacccagcc
tttaattccggtcctaatcctgccggccgtggctgggatcagtctggcgccaactttggc
cctggaatgcccggccagggctatggtcaagttcccggaggtgctgctgggtacggccgt
ggccagaacaatcccggatcgggatgggcacagcccaatgctggcaacttcggcaacggc
tttggaggctatcaagcttaa
DBGET
integrated database retrieval system
