KEGG   Coccidioides immitis: CIMG_09160
Entry
CIMG_09160        CDS       T01114                                 
Name
(RefSeq) transcription factor tfb4
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
cim  Coccidioides immitis
Pathway
cim03022  Basal transcription factors
cim03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CIMG_09160
  09124 Replication and repair
   03420 Nucleotide excision repair
    CIMG_09160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cim03021]
    CIMG_09160
   03400 DNA repair and recombination proteins [BR:cim03400]
    CIMG_09160
Transcription machinery [BR:cim03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CIMG_09160
DNA repair and recombination proteins [BR:cim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CIMG_09160
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 4558308
NCBI-ProteinID: XP_001239539
UniProt: A0A0E1S096
LinkDB
AA seq 396 aa
MNPVDSSDHFEADTAASLLTIVLDTNPHAWALLEDTLPLSTAVANLLVFVNAHLACNYAN
KVAVVASHSQEARWLYPTPTTAPSNTNQDEPADTDGDVAMSSTTGGESPASNKYRPFRIV
EEQLTRNLKALLATTSPASVSSATSTMMAGALTLALSHINRETIAYAETHGTSRLDSDPS
NPTPTATGLPPPPGSHPDPTSQSSHSSPTGLQSRILIISVSSATGSAHQYIPIMNSIFAC
QRLHIPIDICKLSGDAVFLQQACDATRGIYVPVDHPRGFLQYLMVAFLPDQRSRRHLILP
TRVDVDFRAACFCHRKVVDVGFVCSICLSIFCEPPEGADCLTCGTHLELGDYGAKPVVIA
RKKKRKKGATKALVANGGSSGGATPISNPTSTPTLP
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgaaccctgttgattcttccgatcactttgaagctgataccgctgcatcactcctaacc
attgtgctcgacaccaacccgcacgcttgggccctgctagaagacaccctcccactctcc
acagctgtcgccaatctcctcgtcttcgtcaacgcccatctcgcttgcaactatgcgaac
aaggtggctgttgtcgccagccactcccaagaggcccgatggctgtatccgaccccaacc
acagccccatcaaacacaaaccaagatgagccagcagacacagacggagacgtcgccatg
tcttccacaacaggaggcgaaagcccagcatccaacaaataccgccccttccgcatcgtc
gaggagcaactaacccgcaacctcaaagccctcctcgccacaacctccccggcctccgtc
agctccgccacctcgaccatgatggccggcgctctcacccttgccctgagccacataaac
cgcgagacaatcgcctacgccgaaacccacggcacttccagactcgatagcgatccttcc
aatcccaccccgacggccaccggcctccctccaccaccaggctcccacccagacccaacc
tcacaatcatcccactcctccccgaccggcctccagtcccgcatcctcataatctccgta
agcagcgccacgggctcagcccaccagtacatccctatcatgaacagtatcttcgcctgc
cagcgcctgcatatccccatcgacatctgcaaactctccggcgatgccgtcttcctccag
caagcctgcgacgccacccgcggcatctacgttcccgtagaccacccccgcggattccta
cagtacctcatggtggctttcctcccggaccagcgctcacggcgacacctgatcctgccc
acacgcgttgacgttgacttccgcgccgcctgcttctgccaccggaaggtcgtcgatgtg
ggcttcgtctgcagcatttgcctgagcatcttctgcgagcctccagagggcgcggactgt
ctgacctgcggtactcacttggagttgggagattacggtgcgaagccggttgtcatcgcg
aggaagaagaagcgtaaaaagggtgctacaaaggccctcgtcgcaaatggaggctcgtct
ggcggagcgactccaatttctaatccaacatcaacacctactttaccttag

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