Coccidioides immitis: CIMG_09472
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Entry
CIMG_09472 CDS
T01114
Name
(RefSeq) DNA polymerase (pol2)
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cim
Coccidioides immitis
Pathway
cim03030
DNA replication
cim03410
Base excision repair
cim03420
Nucleotide excision repair
cim03430
Mismatch repair
cim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIMG_09472
03410 Base excision repair
CIMG_09472
03420 Nucleotide excision repair
CIMG_09472
03430 Mismatch repair
CIMG_09472
03440 Homologous recombination
CIMG_09472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cim03032
]
CIMG_09472
03400 DNA repair and recombination proteins [BR:
cim03400
]
CIMG_09472
Enzymes [BR:
cim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIMG_09472
DNA replication proteins [BR:
cim03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
CIMG_09472
DNA repair and recombination proteins [BR:
cim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
CIMG_09472
MMR (mismatch excision repair)
DNA polymerase delta complex
CIMG_09472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
divDNApol
RNase_H_2
DNA_pol_B_exo2
DNA_pol_B_2
ETC_C1_NDUFA5
Motif
Other DBs
NCBI-GeneID:
4558833
NCBI-ProteinID:
XP_001239851
UniProt:
J3K2F8
LinkDB
All DBs
AA seq
1110 aa
AA seq
DB search
MPEAILKPQKRILGDSTKAHENLQPVSPNATKKRKLEADQPSIITRPRLQDGFRKAATPA
SSQSQHKSKFVEEVLEKLTQDISGLKESNAEKDQQWERPSLDDFDPMRDSLCFQQIEAEE
GPFSGDQTAVRLFGVTETGHSVLLHVTDFKHYLYVAAPVSFTKSDCEPFGAYLENHVGNH
QTVIHNVQMVMKENLLGFQGNQQHPYLRITVTDPKYINRVRSTIESGNANYRGLWKVGGT
DGILTFDNIQYILRFMIDTGISGMSWVEVPPSKYRIVPEHQRYSNCQIEAVVHYRDLIAH
PHDGEWAKMAPLRILSFDIECAGRKGIFPEAHEDPVIQIANVVTRYGESKPFVRNVFVLN
GCSLIVNTQILDFKTEQEMLMAWREFLEKVDPDVIIGYNIANFDFPYLLDRARHLNCDDF
PYWSRLKNVVSQSKDTNFSSKQMGNRDTKATNTNGRIQLDLLQLIQRDHQLRNYTLNSVC
SHFLGEQKEDVHHTMITELYNGTPDSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARV
TGVPFNFLLSRGQQVKFISQLFRKALEQDLVIPNLKNENGEEQYKGATVIEPVKDYYDVP
IATLDFASLYPSIIQAHNLCYTTLLNKTSVEKLNLKKDEDYIVTPNGDMFCTSKVRKGLL
SQILQELLSARKRAKKELAVETDPFKKAVLNGRQLALKISANSVYGITGASNGKLPCLAI
ASSTTSYGRQMIMKTKDEVEARFTMANGYPYDAKVIYGDTDSVMVKFGVKDIAEAMKLGQ
EAADFVSAKFLEPIKLEFEKVYFPYLLINKKRYAGLFWTNPNKFDKMDSKGIETVRRDNC
RLVQTVIETVLKKILIDRDVNGAESYVKDTIADLLQNKVDMSKLVITKALSKSDYSAKQA
HVELAERMRKRDVGSAPTLGDRVAYVIVKGATGSKNYEKSEDPIYVLENNIPIDTKYYLD
NQLAKPLARIFDPILGERRSAQLLTGEHTRSISVAAPTLGGLMKFAKKTQTCMGCKKPLV
DKDEKEGAVCENCRPRLGELYSKTLNKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDC
PIFYMRMKAKKDVEDAERELARFDHDLGAW
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagctattctgaagccgcaaaagcgaattctcggcgattccaccaaggctcac
gagaatttgcaacccgtatctcctaacgcgacgaagaagcggaaacttgaagccgatcag
cccagtatcattacaaggcctcgattgcaggatggattccgaaaggctgctactcccgct
tccagccagtcccagcataaaagcaagttcgttgaggaagttctggagaaattgacgcag
gacatcagcgggcttaaagagtccaatgcagagaaagatcaacagtgggagcggcctagc
ctggatgatttcgatcctatgagggactctctctgctttcagcagattgaggccgaagag
ggtccgttttcaggtgaccaaaccgcggtgagattattcggcgttacagagaccggacat
tctgttcttttacatgttactgattttaaacactatctatatgttgctgcgcctgtttcc
tttaccaaatcggactgcgaaccgttcggcgcctatctcgagaaccacgttgggaatcac
cagactgtgatacacaacgtccaaatggtgatgaaggaaaacctcttgggcttccagggt
aatcagcaacatccttacttgaggattactgtcacagatccgaaatacatcaacagggtt
cgttcaaccattgagagcggaaacgcaaattacagagggctctggaaagtcggcggcaca
gatggcattcttacgtttgataacatccagtatatcctgcgctttatgattgacactggt
atttctggcatgtcgtgggttgaagtgcctccttccaagtatcgaatcgtccccgaacat
caacgatactcgaactgccaaatcgaggctgtcgttcactatcgtgacttaatagctcat
ccccatgacggtgaatgggcaaaaatggcacctcttcgaattttatcctttgacattgaa
tgcgcgggtagaaaggggatctttcccgaagcccatgaagacccagttattcaaatcgcc
aatgttgttaccagatatggcgaatctaaaccttttgttcgaaacgtattcgtcttaaat
ggctgcagcctgatcgtgaacacacaaatattagactttaagacggagcaggagatgttg
atggcctggagagagtttctagagaaggtggatcccgatgtgatcatcgggtacaacatc
gcaaacttcgattttccctacttacttgaccgtgcgagacaccttaactgtgacgatttt
ccgtactggtcgagactcaaaaacgtagtttcacagtcgaaggacaccaacttctccagc
aaacagatgggtaatagggatacaaaagctaccaataccaacggacgaatccaacttgat
cttttgcagttgatccagcgtgatcatcagcttcgaaactatactctaaactctgtctgt
tcccacttcctaggagagcagaaggaagatgtacatcacaccatgattaccgagctgtac
aatggtacgcctgattctcgacgacgtctggctgtttattgtttgaaggacgcctatctc
cctcagcggctaatggacaaattgatgtgtctcgtgaattatactgaaatggccagagtt
actggtgttccttttaattttcttctatctcgcggacagcaagtcaaattcatttctcag
ctctttaggaaggctttagagcaggacttggtgatccccaaccttaagaacgagaatggt
gaagaacaatacaaaggcgcaacagtcatcgagccggtcaaggactactacgacgtcccg
atcgccacgcttgattttgcatctctataccctagcatcattcaggcacataacctctgt
tataccacccttcttaacaagactagcgttgaaaaactcaacttgaagaaagacgaagat
tatattgtgacgccaaatggtgacatgttttgcacgtccaaggtccgaaaagggcttttg
agtcaaattctacaggagttattatccgcgagaaaacgagcgaagaaagaactcgccgtt
gaaactgacccattcaagaaggccgttttgaacgggcgacaactggctttgaagattagt
gccaacagtgtgtacggtatcaccggtgcaagcaacgggaaattaccctgtttggctatt
gccagtagcacaacaagttatggtagacaaatgatcatgaagacgaaagatgaagtcgag
gcccgatttacgatggcaaacgggtatccttatgatgctaaggtcatatatggggacaca
gactctgttatggttaaatttggggtgaaggatatcgctgaggctatgaagttgggacaa
gaggctgcggacttcgtttcggcgaagttcttggagccgatcaaactcgaattcgagaag
gtttatttcccttatttacttattaacaaaaagcgctacgccggcctcttttggacaaat
ccgaacaaatttgataagatggatagcaaaggtattgaaactgtccgacgagataattgt
cgcttggtccagacggtcattgagactgtcctgaagaagattctcattgacagagatgta
aacggggcagaaagttacgtcaaggacaccattgccgatttacttcaaaataaagtcgat
atgtccaagcttgtcattacgaaagctctctcgaagtcagattactcggcaaaacaagct
catgtggagttagcagagcgaatgagaaaacgcgatgtaggatcagctcctacgcttggt
gaccgtgttgcgtacgttatcgtcaaaggcgctactggctcaaagaactatgagaagtcc
gaagaccccatctacgtcctcgaaaacaatatccccattgatacaaagtactaccttgat
aaccagctcgcaaaaccgctcgctagaattttcgatcccattctcggtgaaagaagatct
gcgcaattactaaccggggagcatacgcgctctatttccgtagcggcacctactcttggt
ggattaatgaaatttgcgaaaaagacccaaacgtgcatgggatgcaagaaaccactcgtc
gataaagatgagaaagagggggctgtttgcgagaattgccggccccgtctaggcgagctg
tactccaaaaccctgaacaaggtatcggatctagaagtccgttttggacgattatggaca
cagtgtcagaggtgtcaggggagtctacactgcgaggttatctgctcgagtcgagactgt
cctatattctacatgaggatgaaggcgaagaaagacgtggaggatgcagagagggagctg
gcgaggttcgaccacgacctcggtgcatggtag
DBGET
integrated database retrieval system
