Coccidioides immitis: CIMG_10247
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Entry
CIMG_10247 CDS
T01114
Name
(RefSeq) WD repeat protein
KO
K12880
THO complex subunit 3
Organism
cim
Coccidioides immitis
Pathway
cim03013
Nucleocytoplasmic transport
cim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CIMG_10247
09122 Translation
03013 Nucleocytoplasmic transport
CIMG_10247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_10247
03041 Spliceosome [BR:
cim03041
]
CIMG_10247
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CIMG_10247
Spliceosome [BR:
cim03041
]
Complex C
Other components
EJC/TREX
CIMG_10247
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CIMG_10247
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Cytochrom_D1
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_NOL10_N
CFAP251_N
DSE1_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
WD40_RFWD3
eIF2A
Beta-prop_SPT8
PAC11
Beta-prop_TEP1_C
Beta-prop_Vps41
TP_0598_N
Beta-prop_WDR41
PALB2_WD40
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
ASA1
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
4557840
NCBI-ProteinID:
XP_001239225
UniProt:
J3K139
LinkDB
All DBs
AA seq
359 aa
AA seq
DB search
MPPPPPSQLIPKDRFGYLFGRLRTQSYTDPNARGPGSHSIRTLAWNPTGLLIATGSADRT
LRIWNPERPDVRYSTELRGHTSGIEQVAFNPVKESELASCSTDGTVRFWDVRSKNCVNRI
DVGGEAFTLSWSADGSVLLAGRMDDTLVPISVDSSSTPTNTTEPSKSGTTAAPYKSLSPH
KQPVRTNGTAFSYSPSNPDLFLTTGDGTVQIVSYPSFHTLHTLNAHTASCHCVSLSPTAR
YLAIGGGDSLISLWDTTDWICKRTVTSSGGGGVRGVSWSWDGRFIVGACDEPDCGGVGLE
IFHAETGESVFTIPVDGSHVVPAVAWHPSRYWLAYSIYADAMGPSSNGLRIVGAGGGGL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcctcctccgtcccagctgatccccaaggatcgctttggctacttgtttggt
agactgagaacacagagctataccgatcccaatgcgcgtggacctggctcgcacagtatt
cgcactctggcatggaatcctaccggccttctcatcgcgacaggttctgccgaccgaaca
ctacgaatttggaacccagagcgccccgatgtgagatattcgactgagctacgcgggcat
acctctggcattgagcaggttgcttttaaccccgtcaaggaatccgagctagcgagctgc
tcaaccgatggaaccgtccgtttctgggacgtgcgatccaagaactgcgtgaaccgcatc
gatgttggcggagaagcattcactctctcctggtccgctgatggcagcgtgctcctcgca
ggaagaatggacgacactctcgtacccatctctgtcgactcttcctccacacctacaaac
accactgaaccctccaaatcgggtacaacagcggctccctacaaatccctttcgcctcac
aaacaacccgtccggaccaacggcaccgcattctcctactcaccctcgaacccggacctc
ttcctcaccaccggcgacggcaccgttcaaatcgtatcctacccctccttccacacactt
cacaccctcaacgcccacaccgcctcctgccactgcgtctccctctccccaacagcccgc
tacctcgcaattggcggtggagactccctaatctccctctgggacaccactgactggatc
tgcaagcgcaccgtgacgagttccggcggaggcggagtgcgcggcgtaagctggagctgg
gacgggcgattcattgtaggcgcgtgcgatgagccggattgcggcggtgttgggttagag
attttccatgcggagaccggggagagtgtgtttacgattccggttgatgggtcgcatgtt
gttcccgctgtggcgtggcatccgtcgaggtattggttggcgtattctatttatgcagat
gcgatgggcccgagtagtaacgggttgagaattgtaggtgctggtggtggtggattgtga
DBGET
integrated database retrieval system