Coccidioides immitis: CIMG_10313
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Entry
CIMG_10313 CDS
T01114
Name
(RefSeq) chromodomain helicase
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cim
Coccidioides immitis
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cim03021
]
CIMG_10313
03036 Chromosome and associated proteins [BR:
cim03036
]
CIMG_10313
Transcription machinery [BR:
cim03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CIMG_10313
Chromosome and associated proteins [BR:
cim03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CIMG_10313
SLIK complex
CIMG_10313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Chromo
Helicase_C
CHD1-like_C
HDA2-3
ResIII
Cdh1_DBD_1
DEAD
Chromo_MIT1
CHDCT2
AAA_22
Motif
Other DBs
NCBI-GeneID:
4557909
NCBI-ProteinID:
XP_001239291
UniProt:
J3K185
LinkDB
All DBs
AA seq
1520 aa
AA seq
DB search
MDPTAMVIPSTATSSPAPIEASIANQSTLGSLEKATIPANQGNGVESVPNTATNLKRDAD
SEHPQATTPTGTTDGVHIGMSSTSSEYEATKSPRGIATPMEADGDSHMEDSSEAVDAVSS
SSGMSGHESKRGVKRKSPIDESDFIRNNPSLYGLRRSNRTRSIRQTIQSTTDSESEVSRP
IKRRRPQPNRKRSSSQSQDSDADSSSDVYSNTQRRQKVKRRRLVQPQVDLAPAHGEVRFS
TRRSNKVLNYNEDDDDDLFGDESDNMTPLDWATVLDDNRPAIDVVLNHRLKDDVDPTRLD
LGRSDFEFYIKWQGKSHYHATWETDESLVDCRSNRRLDNYVRKLLIQELSFMKDPDMIPE
EKEKWNLDRERDIEAIEDFKLVERVIGSRKVAGVTEYYVKWKRLFYESCTWEGAELVSSI
AQQEIDRYLDRCSRPPVSSRLESNQSTRSAFEPIHGTPDFVCNGQLKDFQVKGVNFMAYN
WVRGRNVVLADEMGLGKTVQTVTFINWLRHVRNQQGPFIVVVPLSTMPSWAETFDYWTPD
LNYVVYSGNEASRNIIKEYELLVDGNIKRPKFHVLLTTYEYVLVDASFLSQIKWQFLAVD
EAHRLKNRDSQLYAKLVEFKSPSRLLITGTPVQNNLGELSALMDFLNPGLIEIDENMDLS
SEAASVKLAELTKAIQPFMLRRTKSKVESDLPPKSEKIIRVELSDVQLEYYKNILTKNYA
ALNQGAKGQKQSLLNIMMELKKASNHPFMFANAEDRILQGSTRREDALRALITSSGKMML
LDQLLAKLKNDGHRVLIFSQMVRMLDILADYMDARGFAYQRLDGTIAAGPRRLSIEHFNA
PDSTDFAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRL
VSKDTVEEEVIERARNKLLLEFITIQRGVTDKEATELKDKMVRAGHHINEPTSSEDISRI
LKRRGQRMFEQSGNQKKLEEIDIDAVLANAEEHKTEQAESMEADGGEEFLKAFEFVDVKV
DDLTWDEIIPKEELERIKSEERKEMEAKYLAEEIERSQPRKRKEMADEREERQAKRKARQ
QVNMDVDDDSDAPPAPDPKRPLTEKEIRHLTRAYLRYGDFNDRERDILREAKLLDRDPSV
VNGVLKEIVQSANRHLQEANDEIRALEREGKTFTKKERKAVLFNYGGVKRLNAETIVERP
NEMRILRQITSRLSDPKSFRVPEATKAADYSCTWGAREDGMLCIGIARHGYGAWAQIRDD
PDLGLTDKFFLEEHRADRKNELTRNGEGMKSPGAVHLVRRADYLLSVLKDKMSNGASPTA
KKAVENHHRNNRKPGYSRQQNSGSVSASPAPPSIRKRRESDALRHRVHTRGARGSDRPNT
PTSDTRKGISEVDKIRSRHNANFYSGRRNDYSGVVSNNENMLKMVFKPIRDHLRQISQCT
KEGIPDKNRRAKELRRLLHSVGGFIHKTLDSEETRESLEARLWDYVARYWPNQATPGSAL
LDIYKRMVAAENAPQPKSTT
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaccgccatggtgatcccgagcactgcaacttcctctcccgcaccaattgaa
gcaagtatagccaatcaaagcacattgggtagtctggaaaaggcgactataccggcgaac
cagggcaacggtgtcgaatccgtccctaatactgcgaccaacttgaagcgggatgcggat
tctgagcaccctcaagcaacaacaccaacgggtactactgatggggtgcatatcggaatg
agctccacctcctctgaatatgaggccactaagtctcccaggggaatcgccacacccatg
gaggcggatggtgactcccacatggaagattcttcagaggcagtagatgcggtatccagt
tcctcgggcatgtcgggccacgaatcgaagcgaggtgttaagcgcaagtcgcccatcgat
gagagtgactttattcgaaacaacccaagcttatatggattgcgccgaagcaatcgcacc
cgttctatccgccagacaatccagagcactacagactccgagtctgaggtttccagaccc
attaagaggagacgtcctcagccaaaccgaaaacgatcgtcctcacagtctcaagattcc
gacgcagattcatcaagcgacgtttatagcaacacccagagaaggcaaaaagttaaacgc
cgccgtctagtgcaaccgcaggttgacttagcaccagcacatggggaagttcggttttcc
acgcgtcgttctaacaaagttttaaactacaatgaagatgacgatgatgatctgttcgga
gacgaatcggataacatgaccccactcgattgggcgaccgtcctcgacgataatcgcccc
gccattgatgttgtcctcaaccatcgtttaaaggatgacgtggatcccacgcgacttgac
ctcggacgctcggacttcgaattttatattaaatggcagggaaagtcgcactaccatgca
acgtgggagacagacgagtcccttgtcgattgccgcagtaaccgtcgtctagataattat
gtccgaaagctgctaattcaagagctctcgttcatgaaagatccggatatgatacctgaa
gaaaaggaaaagtggaaccttgaccgcgagcgcgatattgaagcgattgaggacttcaaa
ctcgtcgagcgtgtcattggttctcgcaaggttgcgggggtaaccgagtattacgttaaa
tggaaacgcctgttttacgagagttgtacttgggaaggcgcagagctcgttagcagtatc
gcccaacaggaaatcgaccgttaccttgaccggtgttcccggcctcctgtttcaagcaga
ctggaatcgaaccagtcaactcgttctgcattcgaacctattcatggaactcctgacttc
gtctgcaatggtcaactgaaggacttccaggtgaaaggtgttaatttcatggcatacaac
tgggttcgcggccgaaatgtagttcttgctgatgagatggggttgggaaaaacagtccag
actgtaacttttatcaattggctgcgacatgtgaggaatcaacagggcccgtttattgtg
gttgtccctctttccacaatgccatcgtgggctgaaacattcgactattggacacccgat
ttaaactacgttgtttacagtgggaacgaagcgtcacggaatattatcaaggagtatgaa
cttcttgtcgatggaaacattaaacgcccaaaattccatgtcctcttgaccacttatgag
tatgtgttggtcgacgcgtcctttcttagccaaatcaagtggcaatttctcgcagttgat
gaggcccatcgtctaaaaaatagagactctcagttgtacgcaaagctagttgaattcaag
tctccgagccggttactgattactggaacccccgttcaaaataaccttggagaactatct
gcgctgatggactttctaaatccggggctaattgaaattgatgaaaatatggatttaagc
tcggaagctgcaagcgtcaagctagctgaattgaccaaagcgatacaaccgtttatgctt
cgccggaccaagtctaaggttgaaagtgacttgccgccaaagtcagaaaagattattcgg
gttgagctttcagacgtgcagttggagtattataaaaacattcttaccaagaactatgct
gcccttaatcaaggcgcgaagggccaaaaacaatcattactcaatattatgatggagttg
aaaaaggcaagcaatcatccgttcatgttcgccaacgcagaagatcgaattctgcaaggc
agcacgcgccgagaagatgcactaagggcactgatcaccagcagtggcaagatgatgctg
ctggaccagctgctagcgaagttgaaaaatgatggtcatcgcgttcttattttcagccaa
atggttcgcatgcttgatattcttgctgattacatggatgcgcggggttttgcctatcag
aggctggatggcaccattgcagctggacctcgtcgtttatctattgaacactttaatgct
ccagatagcactgacttcgctttcttgctctcgacgcgtgcgggtgggcttggcattaat
ctcatgacagcagatacagtcattctattcgattcagactggaatccccaagctgattta
caggccatggcgcgagctcatcgcattgggcaaacaaagccggttagcgtctatcggctt
gtatcaaaagacactgtcgaagaagaagtcatagagagggctaggaataagttacttctt
gaattcattaccatccaaagaggtgtgaccgataaggaggccacagaattaaaagataag
atggttcgcgctggccatcatatcaacgagccgacttcctctgaggatatatcccggata
ttgaagcgtcgtgggcaacggatgtttgagcagtctggaaatcaaaagaaactagaagaa
attgacatcgatgctgtccttgcaaatgcggaggagcacaaaacggagcaagccgaaagc
atggaagctgatggaggtgaagagttccttaaagcattcgaatttgtagatgtcaaggta
gatgaccttacctgggatgagattattccaaaggaggagttggaaagaattaaaagcgag
gaacggaaagaaatggaagctaagtacctcgcagaagaaattgaacgcagccagccgagg
aaaagaaaagaaatggcggacgaaagagaagaaaggcaggcaaagcgaaaggctcggcag
caagtgaatatggatgtcgatgatgactccgatgcgcccccagcgccagaccccaaacgt
cccctaactgagaaggaaattcgtcaccttactcgtgcatacttgagatatggcgacttc
aatgatcgcgagagagatattctcagggaagcaaagcttctagacagagatccatcggtc
gtgaacggagttcttaaggaaatagttcagtctgcgaatcggcaccttcaagaagcaaat
gatgagatccgtgcgctagagcgcgagggtaaaacttttaccaaaaaagagaggaaggct
gtgcttttcaactatggaggtgtgaagcgtttaaatgcagaaacaattgtggaacgcccc
aatgagatgcggattttgagacaaatcacatcacgtttgtctgacccgaaaagctttcgc
gtccctgaggccacgaaagctgcggattactcctgcacctggggggcacgggaggatggc
atgctctgcattggaatcgcgcggcatgggtatggagcatgggcacagatccgcgacgat
cccgatctcggccttaccgacaaattctttctggaggaacaccgagcggatcgcaaaaac
gaattaacccgaaatggtgaggggatgaagtctcctggtgccgttcatttagtgcgtcgt
gccgactacctattgtctgttcttaaagataagatgagcaacggtgccagccctacagcg
aagaaggcggtggagaatcaccatcgtaacaacagaaagcccggctattctcgccagcaa
aatagtggcagcgtttctgcctcccctgctccaccatcgatccgtaaacgtcgagaatcg
gatgcgctcaggcatcgtgttcatactcgcggggcccgcggtagtgatcggccaaacacg
ccaacaagcgatacgcgaaagggcatatccgaggtcgacaaaatccgtagtcggcacaat
gccaatttttattctggtcgccgaaacgattatagtggcgtcgtatccaataacgaaaat
atgctgaagatggtttttaagccaatcagggatcacctaaggcagatctcacagtgcacc
aaagaaggaatcccggacaagaatcgacgggccaaagagcttcgacgcttgcttcattcg
gttggcggatttattcacaaaactttggactctgaggaaacgcgggaatccttggaagcg
cgcctttgggactacgtggctcgttattggccaaaccaggcaacacctggaagtgctctt
cttgacatttacaaacgcatggttgctgccgaaaatgccccacaacctaaatctactaca
taa
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