Coccidioides immitis: CIMG_11570
Help
Entry
CIMG_11570 CDS
T01114
Symbol
CIMG05547
Name
(RefSeq) WD repeat protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
cim
Coccidioides immitis
Pathway
cim03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CIMG_11570 (CIMG05547)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cim03009
]
CIMG_11570 (CIMG05547)
Ribosome biogenesis [BR:
cim03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CIMG_11570 (CIMG05547)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_2nd
Beta-prop_CAF1B_HIR1
WD40
B-prop_COPA_B_2nd
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
24163780
NCBI-ProteinID:
XP_001246106
UniProt:
J3KFU0
LinkDB
All DBs
AA seq
956 aa
AA seq
DB search
MKEKRALRPDGSPEARPARETKRIKHSKDADSSLAVVSKHGHSKISAQAQSSSPKKASSK
RVKASRAPASAELSVMPKEVEEQGLAQNGRSDSWGLSYRSGGRFLNLDPIFSSDEKYLLL
ARHNAVQVYSMATSSIVRTLQIPDDVQHITGYKLCPVTPSRIFVATRSGSIIEWDWTTGE
CIHSWDISKRIVSLDAIPETRDDSSLSVSPAVYTICKIHRGKSEICVNIRERDTDGPLWK
QSVIYKTSTHINNLHVVANGRVILATAGPYVVVGQSSGDPLQPAGNLEYTWREIRLPVYG
TCFDIREPPQPHKLPAKAHNRLSPTAAVDLVVGDSDGAISIYYDFLDTLLRCENKGELDA
GLVSRRLHWHRECVKTVRWSKDGNYLISGGLETVLVLWQLDTGRKQFLPHLTSAICNLVV
SPSGVSYAVKLADNSAMVLSTSELRPTTSISSLQLPSKDDVKLHDKSTRSSNKMFNDRLA
AVLHPIQSDYLLLAVPSSQAVYSPDKSPSASFLQTFDTRSNQHISRQALARTNVSILHTG
PEGTELTTPEVKFVEISSDGDWLVTVDEWEQYPESMGVLTPIDESDGSCKRKEIFLKFWH
WNETNNEWELVTRVDGPHFSSTEGSMPVRDLAVNPKQLGFATIGDDGVVRFWTPGYKPSS
RKQDRIVKTWRCSRSIALESPVGADTASASYAGSCLGFSEDGSALAVCFAGQSNPAGLVY
IIEPESGKICHTREGLFSGIPRGCGFLDRYLIVLSDHLVSWHTVTDQVMFAFALTDKPGS
RASNRSTPLLALNHRNQTLAITFPRVMDDSETKSSESENKSHFQVAVFEPSGPNPLFQSK
LKYAPRALLPSAKSGDYIVVDSAAQVLQLSSSTQLARVPIESSEVDLSLRTGLEDIFGYR
RVLPQQNQSELDAEYEHVQVNSLADIFDVGPSFALPGVDVLLKDVMDMFGGKATKE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaaaagggcattgcgtccagacgggtcgcccgaggcgaggcctgcccgcgaa
actaaaaggataaaacacagcaaagatgcggattcatccctagcagtcgtttccaagcat
ggccatagcaaaatttcagctcaagctcagtcatcatcgcccaaaaaagcttcctccaaa
agagtaaaggcgtcccgcgcgccggcatcagcagagctctcggtgatgcccaaggaggtt
gaagagcaaggcctggcacaaaatggacgctccgattcatggggcctatcatatcgtagc
ggtgggcgtttcttaaatttggatcccattttctcatcagatgaaaagtatcttctactt
gcgcgacataatgctgtccaggtctattctatggccacgtcttcaatcgttcggactctc
cagatccccgatgacgtgcaacatataaccggttacaaactctgtcccgttactccaagc
cgaattttcgttgcaacccgctccggcagtataatagagtgggactggaccactggggaa
tgcatacactcctgggacatctcaaagcgcattgtctcccttgacgcaatccccgaaacc
agagatgattcttcactctctgttagccctgctgtttatacgatttgcaaaattcatcgt
ggaaagtctgagatttgcgtgaatatcagagaaagggataccgatggtccgttgtggaag
cagtctgtaatttacaagacttccacgcacatcaacaaccttcacgtcgtcgcaaatggc
agagttatcctcgcaactgcaggaccatacgttgtagtcggtcaatctagtggagatcca
ctacaacctgcaggaaacttggaatatacgtggcgcgagattcggctgccggtatatggc
acatgtttcgatatccgggagccaccgcagccacataagttgcccgcaaaggctcataac
cggctttctcctaccgcagcggtagacctggtagttggagactctgatggcgctatctcg
atatactatgacttcctcgatacattactgcgttgtgaaaataaaggagaattggatgct
ggattagtctcgcgtcgcctccattggcatagagagtgtgttaaaaccgtccgatggtca
aaagacggcaactatctcatatccggaggcctggaaacagtactggttctctggcaactg
gacactggaagaaagcagtttttgccacatctgacctcagcaatttgtaacttggtcgtt
tctccatctggagttagctatgcagtcaagctagcggataattctgccatggtcttgtct
acgtctgaactacggccaaccactagcataagcagtttgcagctaccttcgaaagatgat
gtgaaactgcacgacaagtctacaaggtcgagcaataaaatgttcaatgataggcttgca
gcggttttgcaccccatacaatcggactatctcctcttggccgttccatcctctcaagcc
gtttattcgcctgataagtctcccagcgcttcgtttctgcaaacattcgatacgcggtca
aaccaacatatctctcgtcaagcccttgcgagaactaacgtgtcgatcttgcataccggc
cctgagggtacagaattgactacaccagaggtcaaattcgttgaaatatcctccgatgga
gattggctggtgacagttgacgaatgggagcaatatccagaatccatgggggtcttaaca
cctattgatgaatccgacgggagttgtaagagaaaggaaatatttttgaagttctggcat
tggaacgaaaccaataacgaatgggagcttgtcacccgggtagatggaccacacttttcg
tcaaccgagggttcaatgccagttcgcgatcttgctgtgaacccaaagcagttgggcttt
gcaacaataggagacgacggggtggtccgattttggactcctggatataagccttcttca
cggaaacaggaccgcatagtcaagacttggcgttgctcgcggtccatcgcactcgaaagc
ccagtaggtgctgatactgcttcagcctcctatgcgggatcatgcttgggattttcagag
gacggttcagcgctggctgtatgcttcgctggacagtccaatcctgccggcctcgtatat
atcattgaacctgaaagtggcaaaatctgccacacccgcgaagggcttttctctgggata
ccccgaggatgcggtttccttgatcggtatttgattgtcttatccgatcatctcgtctca
tggcatacagttaccgaccaagtcatgtttgcatttgcactgaccgataaacctggttct
cgcgcttctaaccgatccactccattacttgcgttaaatcaccgaaatcagactcttgct
atcacgtttccccgtgtcatggatgattctgaaactaaatcatcagaatccgagaacaaa
tctcacttccaggtggcagtgttcgagccaagtgggcccaaccctttattccagtcaaag
cttaaatatgctccgcgagccttgcttccaagtgctaaatcaggagactacatcgtcgtt
gattccgccgcgcaggttctccaactttcgtctagtacccaattggcacgggtgccgatt
gaaagtagcgaggtcgacttgtcattgagaactggattggaagatatctttggatatcgt
cgcgttcttcctcagcagaaccaatccgaattggatgccgaatacgagcacgtgcaggtc
aacagcttggcggatatattcgacgttggaccttcatttgcactgccaggggttgacgtt
ctgcttaaagacgtgatggacatgtttggcgggaaagctacaaaggaatag
DBGET
integrated database retrieval system