Coccidioides immitis: CIMG_11915
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Entry
CIMG_11915 CDS
T01114
Symbol
CIMG07195
Name
(RefSeq) WD repeat protein
KO
K12601
superkiller protein 8
Organism
cim
Coccidioides immitis
Pathway
cim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIMG_11915 (CIMG07195)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_11915 (CIMG07195)
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CIMG_11915 (CIMG07195)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Cytochrom_D1
WDR54
eIF2A
Nup160
Hira
RMC1_N
Motif
Other DBs
NCBI-GeneID:
24163930
NCBI-ProteinID:
XP_012214156
UniProt:
A0A0D8JU88
LinkDB
All DBs
AA seq
308 aa
AA seq
DB search
MSKQYLTLHTIDNAHPVDIFSLAVTPTQILSASGSSSLNVHSTTEAEFPIAQSMTKAHKI
GCHHIVATQDGLRAASAGFSGEVKLWAYENGMWSEDTNYTGKICNVWAIILSSDGHYLAG
TTHDGHIKVWDLQNGAHQIHDFETKGSFGMCIDISPDGRFTASGHQSGSVYIFDNSTGRM
PYSLSGLVEPVRAVAFSPGGKLLAAAGDSRVIMLYETSSGEQVANFSGHSAWIMSLDWSH
TGEYLLSGSFDGKVKVWSIERKACVATLSESDKALWCVKWLPKMGKAEGFATAGANRSIA
FYREATGG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcaatatctaacattgcacactattgacaatgcccatcctgtcgatatattt
tctttggcagtcacaccgacccagattctatcagcctcaggctcatcatccctcaatgtt
cattcaaccacagaggcagagtttccgattgcccaatcaatgacaaaagctcacaaaatt
ggttgccaccacatagtagcaactcaggatggattaagggcagccagtgcgggtttcagc
ggtgaagtcaaactgtgggcatatgaaaatgggatgtggagcgaggatacaaactatact
ggaaaaatctgcaatgtctgggccataattctgtctagtgatgggcattatctcgctgga
actacccatgacggccacatcaaagtttgggaccttcagaatggcgctcaccagatccat
gactttgagacgaaaggaagtttcggcatgtgtatagatatttcacccgatggacgattt
acggcttctggccatcaaagtggaagcgtttatatttttgataatagcactggccggatg
ccttattctctatcaggccttgttgagccggttcgggctgtggccttttcgccgggaggg
aaattgctggccgctgctggagattcaagggtgattatgctctacgaaacatcgtcgggc
gagcaggtggcaaactttagcggacattcggcatggattatgtctctagactggagtcac
accggggaatatcttctcagtggatcgtttgacggaaaggtaaaagtatggtcaattgag
cggaaagcttgcgttgcgactctttcggagtctgacaaggcgctgtggtgtgtcaaatgg
ctaccaaaaatgggaaaagcagaaggtttcgcgacagctggtgcaaatcgaagcattgca
ttctatcgtgaggctacggggggttga
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