Coccidioides immitis: CIMG_11969
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Entry
CIMG_11969 CDS
T01114
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
cim
Coccidioides immitis
Pathway
cim03018
RNA degradation
cim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CIMG_11969
09123 Folding, sorting and degradation
03018 RNA degradation
CIMG_11969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cim03019
]
CIMG_11969
03041 Spliceosome [BR:
cim03041
]
CIMG_11969
Messenger RNA biogenesis [BR:
cim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CIMG_11969
mRNA degradation factors
5'-3' decay
Lsm complex
CIMG_11969
Spliceosome [BR:
cim03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CIMG_11969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
24163952
NCBI-ProteinID:
XP_012213946
UniProt:
A0A0D8JVG5
LinkDB
All DBs
AA seq
84 aa
AA seq
DB search
MASQLLPLELIDKCVGSKIWVVMKGDREFSGTLLGFDDYVNMVLEDVTEFDYTGAQTKLP
KILLNGNNVCMLIPGGEGPVGSAS
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcaactactcccacttgaattaattgataaatgcgttggatccaagatctgg
gttgttatgaagggagatagagagttcagcggaactttgcttggattcgatgattacgtt
aatatggttctggaggacgttacagaatttgactatacaggagcccaaactaagcttcct
aagatcttgctaaatggaaataatgtttgcatgttaattcccggcggtgagggtccagtg
ggctctgcaagctag
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integrated database retrieval system
