Cebus imitator (Panamanian white-faced capuchin): 108281417
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Entry
108281417 CDS
T08783
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03082
ATP-dependent chromatin remodeling
cimi04714
Thermogenesis
cimi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108281417 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
108281417 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
108281417 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cimi03021
]
108281417 (SMARCA2)
03036 Chromosome and associated proteins [BR:
cimi03036
]
108281417 (SMARCA2)
Transcription machinery [BR:
cimi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108281417 (SMARCA2)
Chromosome and associated proteins [BR:
cimi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
108281417 (SMARCA2)
Chromatin remodeling factors
BAF complex
108281417 (SMARCA2)
PBAF complex
108281417 (SMARCA2)
GBAF(ncBAF) complex
108281417 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
108281417
NCBI-ProteinID:
XP_017352441
Ensembl:
ENSCCAG00000030636
UniProt:
A0A2K5RGT3
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSTDFPQEGMHQMHKPIDGMHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDPHSQGY
LSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLIPGDPQAMSQPSRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQ
QPPQPQTQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPSGRPSPAPPAAAQPPAAAV
PGPSVPQPAPGQPSPILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE
NLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQT
LREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVAT
WHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTN
LVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTET
GKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILL
DPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLING
TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL
STLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV
EYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMF
QHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIM
EDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVV
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRR
EDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTE
KQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPK
LTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK
YRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEE
EEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDERE
QSEGSGTDDE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggtgcgatgccccacccagggccgtcgccggggccgggg
ccttcccctgggccaattcttggacctagtccaggaccaggaccatccccaggttccgtc
cacagcatgatggggccaagtcctggacctccaagtgtctcccatcctatgcccacgatg
gggtccacagacttcccacaggaaggcatgcatcaaatgcataagcccatcgatggtatg
catgacaaggggattgtagaagacatccattgtggatccatgaagggcacgggtatgcga
ccacctcacccgggcatgggccctccccagagtccaatggatccacatagtcaaggttat
ctgtcaccgcacccatctccgctgggagccccagagcacgtctccagcccaatgtctgga
ggaggcccaactccacctcaaatgccaccaagccagccagggcccctcatcccgggtgat
ccacaggccatgagccagcccagcagaggtccctcacctttcagtcccgtccagctgcat
cagcttcgagctcagattttagcttataaaatgctggcccggggccagcccctccccgaa
acgctgcagcttgcagtccaggggaaaaggacgttgcctggcatgcagcaacaacagcag
cagcaacagcagcagcagcagcagcagcaacagcaacagcagcagcagcagcagcagcag
cagccaccacaaccacagacgcagcaacagcagccggcccttgttaactacaacaggcca
tctggcccggggccggagctgagcggcccgagcaccccgcagaagctgccggtgcccgcg
cccagcggccggccctcgcccgcgccccctgcagccgcgcagccgcccgcggccgctgtg
cccgggccctcggtgccgcagccggccccggggcagccctcgcccatccttcagctgcag
cagaagcagagccgaatcagccccatccagaaaccgcaaggcctggacccggtggagatt
ctgcaggagcgggaatacagacttcaggctcgcatagctcatagaatacaagaactggaa
aatctgcctggctctttgccaccagatttacgaaccaaagcaaccgtggaactaaaagca
cttcggttactcaatttccagcgtcagctgagacaggaggtggtggcctgcatgcgcagg
gacacgaccctggagacggctctcaactccaaagcatacaaacggagcaagcgccagact
ctgcgagaagctcgcatgactgagaagctggagaagcagcagaagattgagcaggagagg
aaacgccgtcagaaacaccaggaatacctgaacagtattttgcaacatgcaaaagatttt
aaggaatatcatcggtctgtggctggaaagatccagaagctctccaaagcagtggcaacg
tggcatgccaacaccgaaagagagcagaagaaggagacagagcggattgaaaaggagagg
atgcggagactgatggctgaagatgaggagggctatagaaaactgattgatcaaaagaaa
gacaggcgtttagcttaccttttgcagcagactgatgagtatgtagccaatctgaccaac
ctggtttgggagcacaagcaagcccaagcagccaaagagaagaagaagagaaggaggagg
aagaagaaggctgaagagaatgcagagggtggggagtccgccctgggaccggatggagag
cccatagatgagagcagccagatgagcgacctccctgtcaaagtgactcacacggaaacc
ggcaaggttctgttcggaccagaagcacccaaagcaagtcagctggatgcctggctggaa
atgaatcctggttatgaagttgcccctagatccgacagtgaagagagtgattctgattat
gaggaggaggatgaggaagaagagtccagtaggcaggaaactgaagagaaaatacttttg
gatccaaatagtgaagaagtttctgagaaggatgctaagcagatcatagagacagctaag
caagacgttgatgatgaatacagcatgcagtacagtgccaggggctcccagtcctattac
actgtggctcatgccatctcggagagggtggagaaacagtcagccctcctcattaacggg
accctaaagcattaccagctccagggcctggaatggatggtttccctgtataataacaat
ttgaatggaatcttagctgatgaaatggggctaggaaagaccatacagaccattgcactc
atcacttatctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctt
tcgactctatctaactggacatatgaatttgacaaatgggctccttctgtggtgaaaatt
tcttacaagggtactcctgccatgcgtcgctcccttgtcccccagctacggagtggcaaa
ttcaatgtcctcttgactacttatgagtacattataaaagacaagcacattcttgcaaag
attcggtggaaatacatgatagtggatgaaggccaccgaatgaagaatcaccactgcaag
ctgactcaggtcttgaacactcactacgtggcccctagaaggatcctcttgactgggacc
ccgctgcagaataaactccctgaactctgggccctcctcaacttcctcctccccacaatt
tttaagagctgcagcacattcgaacaatggttcaatgctccatttgccatgactggtgaa
agggtggacttaaatgaagaagaaactatattgatcatcagacgtctgcataaggtgtta
agaccatttttactaaggagactaaagaaagaagttgaatcccagcttccagaaaaagtg
gaatatgtgatcaagtgtgacatgtcagctctgcagaagattctgtatcgccatatgcaa
gctaaggggatccttctgacagatggttctgagaaagataagaaggggaaaggaggtgct
aagacacttatgaacactatcatgcagttgagaaaaatctgcaaccacccatatatgttt
cagcacatagaggaatcctttgctgagcacctaggctattcaaatggggtcatcaatggg
gctgagctgtatcgggcctcaggaaagtttgagctacttgatcgtattctgccaaaattg
agagcgactaatcatcgagtgctgcttttctgccagatgacatctctcatgaccatcatg
gaagattattttgcttttcggaacttcctttacctgcgccttgatggcaccaccaagtct
gaagatcgtgctgctttgctgaagaaattcaatgaacctggatcccagtatttcattttc
ttgctgagcacaagagctggaggcctgggcttaaatcttcaggcagctgatacggtggtc
atctttgacagcgactggaatcctcatcaggatctgcaggcccaagaccgagctcaccgc
atcgggcagcagaacgaggtccgggtgctgaggctctgtaccgtgaacagcgtggaggaa
aagatcctggcggccgcaaagtacaagctgaacgtggatcagaaagtgatccaggcaggc
atgtttgaccaaaagtcttcaagccacgagcggagggcattcctgcaggccatcttggag
catgaagaggaaaatgaggaagaagatgaagtgccagacgatgagactctgaaccaaatg
attgctcgccgagaagaagaatttgacctttttatgcggatggacatggaccggcggagg
gaagatgctcggaacccgaaacgcaagccccgcctaatggaggaggatgagctgccctct
tggatcattaaggatgacgccgaagtagaaagactcacctgtgaggaagaggaggagaaa
atatttgggagggggtctcgccagcgccgtgacgtggactacagtgacgccctcacagag
aagcagtggctaagggccattgaagacggcaatttggaggaaatggaagaggaagtacgg
cttaagaagcgaaaaagacgaagaaatgtggataaagatcctgcgaaggaggatgtggaa
aaggctaagaagagaagaggccgccctcctgctgagaaattgtcacccaatccccccaaa
ctgacaaagcagatgaatgcgatcatcgatactgtgataaactacaaagacagttcaggg
cgacagctcagtgaagtcttcattcagttaccttcaaggaaagaattgccagaatactat
gaattaattaggaagccagtggatttcaaaaaaatcaaggaaaggattcgtaaccacaag
taccggagcctgggcgacctggagaaggatgtcatgcttctctgtcacaacgctcagacg
ttcaacctggagggatcccagatctatgaagactccatcgtcttacagtcagtgtttaag
agtgcccggcagaaaattgccaaagaggaagagagtgaggatgaaagcaatgaagaggag
gaagaggaagatgaagaagagtcagaatctgaagcaaaatcagtcaaggtgaaaatcaag
ctcaataaaaaagatgagaaaggccgggacaaagggaaaggcaagaaaaggccaaatcga
ggaaaagccaaacctgtagtgagcgattttgacagcgatgaggagcaggatgaacgtgaa
cagtcagaaggcagtgggactgatgatgagtga
DBGET
integrated database retrieval system
