Cebus imitator (Panamanian white-faced capuchin): 108281419
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Entry
108281419 CDS
T08783
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi05017
Spinocerebellar ataxia
cimi05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
108281419 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
108281419 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cimi04131
]
108281419 (VLDLR)
Membrane trafficking [BR:
cimi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108281419 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
hEGF
DUF4010
Motif
Other DBs
NCBI-GeneID:
108281419
NCBI-ProteinID:
XP_017352450
Ensembl:
ENSCCAG00000034631
UniProt:
A0A2K5RZ81
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MGTSARWALWLLLALCWGPRESCATGTGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCVD
GSDEKNCVKKTCAESDFVCSSGQCVPSRWKCDGDPDCEDGSDETPEQCHMRTCRINEISC
GAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEINCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPPGKNWCKEDMENGGCEYLCL
PAPQINDHSPKYTCSCPSGYNLEENGRDCQSTATTVTYSETKDTNTTEISPTSGLVPGGI
NVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggggccccgg
gagagctgcgccaccggaaccgggagaaaagccaagtgtgaaccctcccaattccagtgc
acaaatggtcgctgtattaccctgttgtggaaatgtgatggagacgaagactgtgttgat
ggcagtgatgaaaagaactgtgtaaagaagacatgtgccgaatctgacttcgtgtgcagc
agtggccagtgtgttcccagccgatggaagtgtgatggagatcccgactgtgaagatggt
tcagatgaaaccccagaacagtgccatatgagaacgtgccgcataaatgaaatcagctgt
ggcgcccattctactcagtgtatcccagtgtcctggagatgtgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggtaacataacatgtagccccgatgagttcacg
tgctccagtggccgctgcatctccaggaactttgtatgcaatggccaggatgactgcagc
gatggcagcgacgagctggactgtgccccgccaacctgtggcgcccatgagttccagtgc
agcacctcctcctgcatccccatcagctgggtgtgcgacgatgatgcagactgctctgac
caatctgatgagtccctggagcagtgtggccgccagccagttatacacaccaagtgccca
gccagtgagatccagtgcggctctggcgagtgcatccataagaaatggcgatgcgacggg
gaccctgactgcaaggacggcagtgatgaggtcaactgtccctctcgaacttgcagacct
gaccagtttgaatgtgaggatggcagctgcatccatggtagcaggcagtgtaatggtatc
cgagactgtgttgacggttctgacgaaatcaactgcaaaaatgtcaatcagtgcttgggc
cctggaaaattcaagtgcagaagtggagaatgcatagatatcagcaaagtatgtaaccag
gagcaggactgcagggactggagtgatgagcccctgaaagaatgtcatataaatgaatgc
ttggtaaataatggtggatgttcccatatctgcaaagacctagtcataggctacgagtgt
gactgtgcggctgggtttgaactgatagataggaaaacctgtggagatattgacgaatgc
caaaacccgggaatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggtgtgtgcaaggcagtaggcaaagag
ccaagtctgatctttactaatcgaagagacatcaggaagattggcttagagagaaaagaa
tatatccaactagttgaacaactaagaaacactgtggctctcgatgctgacattgctgct
cagaaactgttctgggccgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
accctagatggaaccaagaggaagttcctgtttaactctgacttgcgagagcctgcctcc
atagctgtggatccactttctggctttgtttactggtcagactggggtgaaccagctaaa
atagaaaaagcaggaatgaatggatttgatagacgtccgctggtgacagtggacatccag
tggcctaacggaattacactggaccttataaaaagccgcctctattggcttgattctaag
ttgcacatgttatccagcgtggacttgaatggccaagatcgtaggatagtactaaagtct
ctggagttcctagctcatcctcttgcactaacaatatttgaggatcgtgtctactggata
gatggggaaaatgaagcggtctatggtgccaacaaattcactggatcagagctagccact
ctagtcaacaaccttaacgatgcccaagacatcattgtctatcatgaacttgtacagcca
ccaggtaaaaattggtgtaaagaagacatggagaatggaggatgtgaatacctatgcctg
ccagcaccacagattaatgatcactctccaaaatatacctgttcctgtcccagtgggtac
aatctagaggaaaatggccgagactgccaaagtactgctactactgtgacttacagtgag
acaaaagatacaaacacaacagaaatttcaccaactagtggactagttcctggagggatc
aatgtgaccacagcagtctcagaagtcagtgttcccccaaaagggacttctgctgcatgg
gccattcttcctctcttgctcttagtgatggcagcagtaggtggctacttgatgtggcgg
aattggcaacacaagaatatgaaaagcatgaactttgacaatcctgtatacttgaaaacc
actgaagaggacctctccatagacattggtagacacagtgcttctgttggacacacgtac
ccagcaatatcagttgtaagcacagatgatgatctagcttga
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integrated database retrieval system
