Cebus imitator (Panamanian white-faced capuchin): 108282618
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Entry
108282618 CDS
T08783
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cimi04142
Lysosome
cimi04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108282618 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108282618 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
108282618 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cimi02000
]
108282618 (NPC1)
Transporters [BR:
cimi02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
108282618 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
108282618
NCBI-ProteinID:
XP_017354106
Ensembl:
ENSCCAG00000035662
UniProt:
A0A2K5S5I5
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MSARDLVLGLLLLLLCPAQVFSQSCVWYGECGVAYGDKRYNCEYSGSPKPLPKDGYDLVQ
ELCPGFFFGNVSLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQF
LNVTATEDYVDPVTNQTKTNVKELQYYVGQSFANAMYNACRDVEAPSSNDKALGLLCGKD
VDACNATNWIEYMFNKDNGQAPFTITPVFSDFPVHGMEPMNNATKGCDESVDEATAPCSC
QDCSIVCGPKPQPPPSPAPWTILGLDAMYVIMWITYMAFLLVFFGAFFAVWCYRKRYFVS
EYTPIDSNIAFSVNASDKGTTWLLTSTLPSSPTLPGEVSCCDPVSAAFEGCLRRLFTRWG
SFCVRNPGCVISFSLVFTAVCSSGLVFVRVTTNPIDLWSAPSSQARLEKEYFDQHFGPFF
RTEQLIIQAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYNNETVT
LQDICLAPLAPYNTNCTIMSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASL
NDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVRNYYNDTEKLQRAQAW
EKEFINFVKNYKNSNLTISFTAERSIEDELNRESNSDIFTVVISYAIMFLYISLALGHIE
SCQRLLVDSKVSLGIAGILIVLSSVACSLGVFSYIGFPLTLIVIEVIPFLVLAVGVDNIF
ILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSMMPAVHTFSLF
AGLAVLIDFLLQITCFVSLLGLDIKRQEKNRLDIFCCLKGAEDGTSVQASESCLFRFFKN
SYAPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVDIGLDQSLSMPDDSYVVDYFKSISQYL
HAGPPVYFVLEEGHDYTSPKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWI
DDYFDWVKPQSSCCRVDNITDQFCNASVVDPACIRCRPLTAEGKQRPQGRDFLRFLPMFL
SDNPNPKCGKGGHAAYSSAVNILSNGTGVGATYFMTYHTVLQTSADFIDALKKARLIASN
ITETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTVFNLGVSLGAIFLVTMVLLGCELWSA
VIMCTTIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRV
DRAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFL
PVLLSYIGPSVNKAKSRATEERYKGTERERLLNF
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcgcgacctggtcctcggcctcctcctgctgctactgtgtccggcgcaggtg
ttttcacagtcctgtgtttggtatggagagtgtggagtggcatatggggacaagaggtac
aattgcgaatattctggctcaccaaaaccactgccaaaggatggatatgacttagtgcag
gaactctgtccaggattcttctttggcaatgtcagtctctgttgtgatgttcagcagctt
cagacactgaaagacaacctgcagctgcctctacaatttctgtccagatgtccatcctgt
ttttataacctactgaacctgttttgtgagctgacatgtagccctcgacagagtcagttt
ttgaatgttacagcaactgaagattatgttgatcctgttacaaaccagacaaaaacaaat
gtgaaagagttacagtactatgttggacagagttttgccaacgcaatgtacaatgcctgc
cgggatgtggaggccccctcaagtaatgacaaggccctgggacttctgtgtgggaaggat
gttgatgcctgtaatgccaccaactggattgaatacatgttcaataaggacaacggacag
gcacctttcactatcactcccgtgttttcagattttccagtccatgggatggagcccatg
aataatgccaccaaaggctgtgacgagtctgtggatgaggctacagcgccatgtagctgc
caggactgctctattgtatgtggccccaagcctcagcccccaccctctcctgctccctgg
acgatcctcggcttggacgccatgtatgtcatcatgtggatcacctacatggcgttttta
cttgtgttttttggagcattttttgcagtgtggtgctacagaaagcggtactttgtctct
gagtacactcccattgatagcaatatagctttttctgttaacgcaagtgacaaaggaacg
acttggctcctaacctccaccctcccttcctcccccactcttccaggagaggtgtcctgc
tgcgacccggtcagtgcagcatttgagggctgcttgaggcggctgttcacacgctggggg
tctttctgcgtccgaaaccctggctgcgtcatttccttctcgctggtcttcactgctgtg
tgttcttcaggcctggtgtttgtccgggtcacaaccaatccaattgacctctggtcagcc
cccagcagccaggctcgcctggaaaaagagtactttgatcagcactttgggcctttcttc
cggacagagcagctcatcatccaggccccccttaccgacaaacacatttatcagccgtac
ccttcaggagccgatgtgccctttggacctccacttgacatacagatactgcaccaggtt
cttgacttacaaatagccatcgaaaacattactgcctcttataacaatgagactgtgaca
cttcaagacatctgcttggctcctctcgcaccatataacacgaactgcaccattatgagt
gtgttaaattacttccagaacagccactccgtgctggaccacaagaaaggggatgacttc
tttgtgtacgccgattaccacacgcactttctgtactgcgtacgggctccggcctctctg
aatgatacaagtttgctccatgatccttgtctgggtacatttggtggaccagtgttcccg
tggcttgtgttgggaggctatgatgatcaaaactacaataacgccactgcccttgtgatt
accttccctgtgcgtaattactataatgatacagagaagctccagagggcccaggcctgg
gaaaaagagtttattaattttgtgaaaaactacaagaattccaatctgaccatttccttc
actgctgaacgaagtattgaagatgaactaaatcgtgaaagtaacagtgatatcttcact
gttgtaattagctatgccatcatgtttctatatatttccctagccttggggcacatcgaa
agctgtcaaaggcttctggtggattcgaaggtctcactaggcattgcaggcatcctgatc
gtgctgagctcggtggcttgctccttgggcgtcttcagctacattgggttccccttgacc
ctcattgtgattgaagtcatcccgttcctggtactggctgttggagtggacaacatcttc
attttggtgcaggcctaccagagagatgaacgtcttcaaggggaaaccctggatcagcag
ctgggcagggtcctaggagaagtggcccccagtatgttcctgtcatccttttctgagact
gtagcatttttcttaggagcactgtccatgatgccagctgtacacacattctctctgttt
gcgggattggccgtcctcattgactttcttctgcagattacctgtttcgtgagtctcttg
ggattagacattaaacgtcaagagaaaaatcggctagacatcttttgctgcctcaaaggt
gctgaagatggaacaagtgtccaggcctcagagagctgtttgtttcgcttcttcaaaaac
tcctatgctccacttctgctaaaggactggatgagaccgattgtgatagcagtatttgtg
ggtgttctgtcattcagcattgcagtcctgaacaaagtagatattggattggatcagtct
ctttcaatgccagatgactcctacgtggtggattatttcaaatccatcagtcagtacctg
catgcgggtccgcctgtgtactttgtcctggaggaagggcacgactacacttctccaaag
gggcagaacatggtgtgcggtggcatgggctgcaacaatgattctctggtgcagcagata
tttaacgcggcacagctggacaactatacccgaataggcttcgccccctcgtcctggatt
gacgattatttcgactgggtgaagccgcagtcatcttgctgtcgagtggacaatatcact
gaccagttctgcaatgcttcagtggtcgaccctgcctgcatccgctgcaggcctctgact
gcagagggaaaacagaggcctcagggtagagacttcctgagattcctgcccatgttcctt
tcggataatcctaaccccaagtgtggcaaagggggacatgctgcctatagttctgcagtt
aacatcctcagcaacggcaccggggtcggagccacatacttcatgacctaccacacagtg
ctgcagacctctgctgactttattgacgctctgaagaaagcacgacttatagccagtaac
atcactgaaaccatgggcattaatggcagtgcttaccgggtgtttccctacagtgtgttt
tatgtcttctacgaacagtacctgaccatcattgacgacactgtcttcaacctcggcgtg
tccctgggcgccatatttctggtaaccatggtcctcctgggctgtgagctgtggtccgct
gtcatcatgtgcaccaccatcgccatggtcttggtcaacatgtttggagttatgtggctc
tggggcatcagtctgaacgctgtgtccttggtcaacctggtgatgagctgtggcatctcc
gtggagttttgcagccacataaccagagcgttcacggtgagcacgaagggcagccgtgtg
gaccgcgcagaagaggcactcgcccacatgggcagctctgtattcagtggaatcacactt
acaaaatttggagggattgtggtgttggcttttgccaaatctcaaattttccagatattc
tacttcaggatgtacttggctatggtcttactgggagccacacatggattaatatttctc
cctgtcttactcagttacatagggccatcagtaaataaagccaaaagtcgtgccactgaa
gagcgatacaaaggaacagagcgcgaacggcttctaaacttctag
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integrated database retrieval system
